RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 HIST2H3PS2Q5TEC6 136 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 HIST2H3AQ71DI3 136 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 SLC25A45Q8N413 288 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 SLC35G3Q8N808 338 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 FADS6Q8N9I5 356 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 OR10AD1Q8NGE0 317 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 TMEM54Q969K7 222 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 SPACA9Q96E40 222 aaPredicted RBP9.48□□□□□ -0.89
SNIP1-204ENST00000638725 OR6C1Q96RD1 312 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 TP53RKQ96S44 253 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 SPSB2Q99619 263 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 BCL2L14Q9BZR8 327 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 CHRDQ9H2X0 955 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 HSF4Q9ULV5 492 aa9.48□□□□□ -0.89
SNIP1-204ENST00000638725 CCDC85CA6NKD9 419 aa9.47□□□□□ -0.89
SNIP1-204ENST00000638725 STARD6P59095 220 aa9.47□□□□□ -0.89
SNIP1-204ENST00000638725 FOXL2NBQ6ZUU3 175 aa9.47□□□□□ -0.89
SNIP1-204ENST00000638725 RABEPKQ7Z6M1 372 aa9.47□□□□□ -0.89
SNIP1-204ENST00000638725 SUMF1Q8NBK3 374 aa9.47□□□□□ -0.89
SNIP1-204ENST00000638725 SLAMF9Q96A28 289 aa9.47□□□□□ -0.89
SNIP1-204ENST00000638725 C10orf35Q96D05 121 aa9.47□□□□□ -0.89
SNIP1-204ENST00000638725 BOD1Q96IK1 185 aa9.47□□□□□ -0.89
SNIP1-204ENST00000638725 YPEL4Q96NS1 127 aa9.47□□□□□ -0.89
SNIP1-204ENST00000638725 MMP24Q9Y5R2 645 aa9.47□□□□□ -0.89
SNIP1-204ENST00000638725 ASCC3Q8N3C0 2202 aaKnown RBP9.47□□□□□ -0.89
SNIP1-204ENST00000638725 CABIN1Q9Y6J0 2220 aa9.47□□□□□ -0.89
SNIP1-204ENST00000638725 SHANK1Q9Y566 2161 aa9.47□□□□□ -0.89
SNIP1-204ENST00000638725 IGKV1-12A0A0C4DH73 117 aa9.47□□□□□ -0.89
SNIP1-204ENST00000638725 YIF1AO95070 293 aa9.47□□□□□ -0.89
SNIP1-204ENST00000638725 IFNA17P01571 189 aa9.47□□□□□ -0.89
SNIP1-204ENST00000638725 IGKV1D-12P01611 117 aa9.47□□□□□ -0.89
SNIP1-204ENST00000638725 RD3LP0DJH9 198 aa9.47□□□□□ -0.89
SNIP1-204ENST00000638725 NR2C1P13056 603 aa9.47□□□□□ -0.89
SNIP1-204ENST00000638725 RPS10P46783 165 aaKnown RBP9.47□□□□□ -0.89
SNIP1-204ENST00000638725 RAB1AP62820 205 aa9.47□□□□□ -0.89
SNIP1-204ENST00000638725 H3F3AP84243 136 aa9.47□□□□□ -0.89
SNIP1-204ENST00000638725 HEPN1Q6WQI6 88 aa9.47□□□□□ -0.89
SNIP1-204ENST00000638725 ZNF574Q6ZN55 896 aaPredicted RBP9.47□□□□□ -0.89
SNIP1-204ENST00000638725 Q6ZPA2 131 aa9.47□□□□□ -0.89
SNIP1-204ENST00000638725 ZFP62Q8NB50 900 aaPredicted RBP9.47□□□□□ -0.89
SNIP1-204ENST00000638725 LFNGQ8NES3 379 aa9.47□□□□□ -0.89
SNIP1-204ENST00000638725 OR4D5Q8NGN0 318 aa9.47□□□□□ -0.89
SNIP1-204ENST00000638725 SPTSSAQ969W0 71 aa9.47□□□□□ -0.89
SNIP1-204ENST00000638725 SPSB1Q96BD6 273 aa9.47□□□□□ -0.89
SNIP1-204ENST00000638725 IGSF23A1L1A6 192 aa9.46□□□□□ -0.89
SNIP1-204ENST00000638725 ZNF727A8MUV8 499 aa9.46□□□□□ -0.89
SNIP1-204ENST00000638725 NPIPA2E9PIF3 369 aa9.46□□□□□ -0.89
SNIP1-204ENST00000638725 NPIPA3F8WFD2 350 aa9.46□□□□□ -0.89
SNIP1-204ENST00000638725 SCRG1O75711 98 aa9.46□□□□□ -0.89
SNIP1-204ENST00000638725 DKK1O94907 266 aa9.46□□□□□ -0.89
SNIP1-204ENST00000638725 ONECUT2O95948 504 aa9.46□□□□□ -0.89
SNIP1-204ENST00000638725 AADACP22760 399 aa9.46□□□□□ -0.89
SNIP1-204ENST00000638725 OMGP23515 440 aa9.46□□□□□ -0.89
SNIP1-204ENST00000638725 ATP6V0CP27449 155 aa9.46□□□□□ -0.89
SNIP1-204ENST00000638725 CEBPGP53567 150 aa9.46□□□□□ -0.89
SNIP1-204ENST00000638725 GNMTQ14749 295 aa9.46□□□□□ -0.89
SNIP1-204ENST00000638725 WDR74Q6RFH5 385 aaPredicted RBP9.46□□□□□ -0.89
SNIP1-204ENST00000638725 TMEM123Q8N131 208 aa9.46□□□□□ -0.89
SNIP1-204ENST00000638725 FBXL14Q8N1E6 418 aa9.46□□□□□ -0.89
SNIP1-204ENST00000638725 OR2C3Q8N628 320 aa9.46□□□□□ -0.89
SNIP1-204ENST00000638725 OR2G3Q8NGZ4 309 aa9.46□□□□□ -0.89
SNIP1-204ENST00000638725 MOB3AQ96BX8 217 aa9.46□□□□□ -0.89
SNIP1-204ENST00000638725 BORCS8Q96FH0 119 aa9.46□□□□□ -0.89
SNIP1-204ENST00000638725 SYT3Q9BQG1 590 aa9.46□□□□□ -0.89
SNIP1-204ENST00000638725 ANGPTL4Q9BY76 406 aa9.46□□□□□ -0.89
SNIP1-204ENST00000638725 DEFB126Q9BYW3 111 aa9.46□□□□□ -0.89
SNIP1-204ENST00000638725 ULBP2Q9BZM5 246 aa9.46□□□□□ -0.89
SNIP1-204ENST00000638725 TMPRSS5Q9H3S3 457 aa9.46□□□□□ -0.89
SNIP1-204ENST00000638725 CHCHD2Q9Y6H1 151 aaPredicted RBP9.46□□□□□ -0.89
SNIP1-204ENST00000638725 CNTRLQ7Z7A1 2325 aa9.46□□□□□ -0.89
SNIP1-204ENST00000638725 NKX2-6A6NCS4 301 aa9.46□□□□□ -0.9
SNIP1-204ENST00000638725 MAS1LP35410 378 aa9.46□□□□□ -0.9
SNIP1-204ENST00000638725 KIAA0141Q14154 515 aaPredicted RBP9.46□□□□□ -0.9
SNIP1-204ENST00000638725 SPSB3Q6PJ21 355 aa9.46□□□□□ -0.9
SNIP1-204ENST00000638725 BATF2Q8N1L9 274 aa9.46□□□□□ -0.9
SNIP1-204ENST00000638725 MR1Q95460 341 aa9.46□□□□□ -0.9
SNIP1-204ENST00000638725 ZNF286AQ9HBT8 521 aa9.46□□□□□ -0.9
SNIP1-204ENST00000638725 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.46□□□□□ -0.9
SNIP1-204ENST00000638725 ZNF724A8MTY0 619 aa9.46□□□□□ -0.9
SNIP1-204ENST00000638725 CELA2AP08217 269 aa9.46□□□□□ -0.9
SNIP1-204ENST00000638725 CRYGSP22914 178 aa9.46□□□□□ -0.9
SNIP1-204ENST00000638725 RBP2P50120 134 aa9.46□□□□□ -0.9
SNIP1-204ENST00000638725 AFF3P51826 1226 aaKnown RBP9.46□□□□□ -0.9
SNIP1-204ENST00000638725 HAGHQ16775 308 aa9.46□□□□□ -0.9
SNIP1-204ENST00000638725 RAET1LQ5VY80 246 aa9.46□□□□□ -0.9
SNIP1-204ENST00000638725 C1QL4Q86Z23 238 aa9.46□□□□□ -0.9
SNIP1-204ENST00000638725 MUCL1Q96DR8 90 aa9.46□□□□□ -0.9
SNIP1-204ENST00000638725 JSRP1Q96MG2 331 aaPredicted RBP9.46□□□□□ -0.9
SNIP1-204ENST00000638725 GGACTQ9BVM4 153 aa9.46□□□□□ -0.9
SNIP1-204ENST00000638725 AKIRIN1Q9H9L7 192 aaPredicted RBP9.46□□□□□ -0.9
SNIP1-204ENST00000638725 TMED3Q9Y3Q3 217 aa9.46□□□□□ -0.9
SNIP1-204ENST00000638725 A0A1B0GW64 132 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 RBFOX3A6NFN3 312 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 G3V3Y1 287 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 H3BQ15 152 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 TERTO14746 1132 aaKnown RBP9.45□□□□□ -0.9
SNIP1-204ENST00000638725 PATE4P0C8F1 98 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 HERV-K104P61576 105 aa9.45□□□□□ -0.9
SNIP1-204ENST00000638725 CNN3Q15417 329 aaKnown RBP9.45□□□□□ -0.9
SNIP1-204ENST00000638725 ZNF774Q6NX45 483 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms