RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 UBE2L3P68036 154 aaKnown RBP13.56□□□□□ -0.24
UBE3A-227ENST00000638011 DERL3Q96Q80 235 aa13.56□□□□□ -0.24
UBE3A-227ENST00000638011 ZNF346Q9UL40 294 aaKnown RBP13.56□□□□□ -0.24
UBE3A-227ENST00000638011 LIPGQ9Y5X9 500 aa13.56□□□□□ -0.24
UBE3A-227ENST00000638011 CDS2O95674 445 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 GABRA1P14867 456 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 Q56UQ5 140 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 NEUROG1Q92886 237 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 OPN4Q9UHM6 478 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 DUSP13Q9UII6 198 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 ICAM5Q9UMF0 924 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 CDC14CA4D256 554 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 H0YIG0 161 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 CRXO43186 299 aaPredicted RBP13.55□□□□□ -0.24
UBE3A-227ENST00000638011 CSNK1EP49674 416 aaKnown RBP13.55□□□□□ -0.24
UBE3A-227ENST00000638011 ACSM6Q6P461 480 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 YRDCQ86U90 279 aaKnown RBP13.55□□□□□ -0.24
UBE3A-227ENST00000638011 OR6C1Q96RD1 312 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 C1QTNF6Q9BXI9 259 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 MED13Q9UHV7 2174 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 PRR14LQ5THK1 2151 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 A0A1B0GX78 115 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 OR4C46A6NHA9 309 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 A8MWL6 223 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 HIST1H1DP16402 221 aaKnown RBP13.55□□□□□ -0.24
UBE3A-227ENST00000638011 GAMTQ14353 236 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 C1orf220Q5T0J3 134 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 PARS2Q7L3T8 475 aaKnown RBP13.55□□□□□ -0.24
UBE3A-227ENST00000638011 SDF2Q99470 211 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 TNCP24821 2201 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 M0R082 166 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 LAMTOR5O43504 91 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 CTAG2O75638 210 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 GAPDHP04406 335 aaKnown RBP13.55□□□□□ -0.24
UBE3A-227ENST00000638011 NMUP48645 174 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 SLC37A1P57057 533 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 C3orf85A0A1B0GTC6 90 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 OR5B21A6NL26 309 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 ZNF749O43361 778 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 HSF5Q4G112 596 aaPredicted RBP13.55□□□□□ -0.24
UBE3A-227ENST00000638011 SAMD13Q5VXD3 122 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 NUP37Q8NFH4 326 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 MVB12AQ96EY5 273 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 C16orf70Q9BSU1 422 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 SNURFLB1AK76 121 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 HPXP02790 462 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 FAAP20Q6NZ36 180 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 RBPMS2Q6ZRY4 209 aaKnown RBP13.55□□□□□ -0.24
UBE3A-227ENST00000638011 RNF165Q6ZSG1 346 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 MUC15Q8N387 334 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 RPEQ96AT9 228 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 LPAR5Q9H1C0 372 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 P2RY12Q9H244 342 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 SLC25A22Q9H936 323 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 CDKN2AP42771 156 aaKnown RBP13.55□□□□□ -0.24
UBE3A-227ENST00000638011 CRYBB2P43320 205 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 OR4S2Q8NH73 311 aa13.55□□□□□ -0.24
UBE3A-227ENST00000638011 TNRC6AQ8NDV7 1962 aaKnown RBP13.54□□□□□ -0.24
UBE3A-227ENST00000638011 SCRG1O75711 98 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 OR8B3Q8NGG8 313 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 TAPBPO15533 448 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 WNT3P56703 355 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 ZNF121P58317 390 aaPredicted RBP13.54□□□□□ -0.24
UBE3A-227ENST00000638011 TMEM99Q8N816 258 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 SFRP2Q96HF1 295 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 KCNK7Q9Y2U2 307 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 SSC5DA1L4H1 1573 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 DOCK1Q14185 1865 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 MPDU1O75352 247 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 UBE2FQ969M7 185 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 USP3Q9Y6I4 520 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 CTXND1A0A1B0GTU2 59 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 PITX3O75364 302 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 DHRS3O75911 302 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 HLA-DRB1P01911 266 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 FUT7Q11130 342 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 ZDHHC8Q9ULC8 765 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 MRPS2Q9Y399 296 aaKnown RBP13.54□□□□□ -0.24
UBE3A-227ENST00000638011 TNFRSF1AP19438 455 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 RPL18Q07020 188 aaKnown RBP13.54□□□□□ -0.24
UBE3A-227ENST00000638011 CD300LDQ6UXZ3 194 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 NIT1Q86X76 327 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 C20orf27Q9GZN8 174 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 LANCL2Q9NS86 450 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 TCRBV5S2A0A599 114 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 C19orf67A6NJJ6 358 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 ASTLQ6HA08 431 aaPredicted RBP13.54□□□□□ -0.24
UBE3A-227ENST00000638011 SLC36A1Q7Z2H8 476 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 SLC16A11Q8NCK7 471 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 OTOSQ8NHW6 89 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 ST6GAL2Q96JF0 529 aa13.54□□□□□ -0.24
UBE3A-227ENST00000638011 A0A1B0GU03 582 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 LYZL6O75951 148 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 CTSDP07339 412 aaPredicted RBP13.53□□□□□ -0.24
UBE3A-227ENST00000638011 MMP9P14780 707 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 CCR5P51681 352 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 SLC35B1P78383 322 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 HSD11B1LQ7Z5J1 315 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 CALHM1Q8IU99 346 aa13.53□□□□□ -0.24
UBE3A-227ENST00000638011 RHBDD1Q8TEB9 315 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms