RNA–Protein interactions for RNA: ENST00000637968.1

SCN1A-216, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,614 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-216ENST00000637968 SLC17A2O00624 439 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 ISLRO14498 428 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 IGLC2P0DOY2 106 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 IGLC3P0DOY3 106 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 HOXB9P17482 250 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-216ENST00000637968 PI3P19957 117 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 CRYBA2P53672 197 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 UCP2P55851 309 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 PRTGQ2VWP7 1150 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 TMEM249Q2WGJ8 235 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 OR10G3Q8NGC4 313 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 EMG1Q92979 244 aaKnown RBP5.08□□□□□ -1.6
SCN1A-216ENST00000637968 SLC39A9Q9NUM3 307 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 MTCH1Q9NZJ7 389 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 UBR2Q8IWV8 1755 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 LOC102723971A0A1B0GUV8 181 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 KLRC4-KLRK1H3BQV0 150 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 SLC33A1O00400 549 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-216ENST00000637968 XRCC2O43543 280 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 ABHD16AO95870 558 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 SMIM17P0DL12 118 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 TAS2R46P59540 309 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 CSNK1G2P78368 415 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 TIAL1Q01085 375 aaKnown RBP eCLIP5.08□□□□□ -1.6
SCN1A-216ENST00000637968 SLC18B1Q6NT16 456 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 WDR82Q6UXN9 313 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 TOP6BLQ8N6T0 577 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 DNASE2BQ8WZ79 361 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 WBP2Q969T9 261 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 HARBI1Q96MB7 349 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 SDF2L1Q9HCN8 221 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 TUBD1Q9UJT1 453 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 ARID1AO14497 2285 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.08□□□□□ -1.6
SCN1A-216ENST00000637968 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 HSBP1O75506 76 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 CD1AP06126 327 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 BCL2P10415 239 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 FABP2P12104 132 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 EN2P19622 333 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-216ENST00000637968 ECI1P42126 302 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 SLC25A1P53007 311 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 POLR2LP62875 67 aaKnown RBP5.08□□□□□ -1.6
SCN1A-216ENST00000637968 ACTL10Q5JWF8 245 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 PHF19Q5T6S3 580 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 SLC25A34Q6PIV7 304 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 SMIM20Q8N5G0 67 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 DTWD2Q8NBA8 298 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 OR10V1Q8NGI7 309 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 OR51A4Q8NGJ6 313 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 RTN4IP1Q8WWV3 396 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-216ENST00000637968 RERGQ96A58 199 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-216ENST00000637968 LMLNQ96KR4 655 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 IL17FQ96PD4 163 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 NGBQ9NPG2 151 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 TMEM140Q9NV12 185 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 CLDND1Q9NY35 253 aa5.08□□□□□ -1.6
SCN1A-216ENST00000637968 ARFGEF1Q9Y6D6 1849 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 TRBV7-9A0A0J9YWB2 115 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 OR2T8A6NH00 312 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 C1QTNF3-AMACRE9PGA6 284 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 C17orf112F2Z3M2 114 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 ERI3O43414 337 aaKnown RBP5.07□□□□□ -1.6
SCN1A-216ENST00000637968 EFEMP2O95967 443 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 CRYGCP07315 174 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 FAM87AP0C7U9 286 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 NPY1RP25929 384 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 IL13RA2Q14627 380 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 GLYATL3Q5SZD4 288 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 FBXL22Q6P050 247 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 ZNF562Q6V9R5 426 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 Q7L0L9 218 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 TMEM217Q8N7C4 229 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 PTX4Q96A99 478 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 P2RX4Q99571 388 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 RSG1Q9BU20 258 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 C12orf49Q9H741 205 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 IL23AQ9NPF7 189 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 OBP2AQ9NY56 170 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 KIAA1324LA8MWY0 1029 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-216ENST00000637968 FCN1O00602 326 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 DEDDO75618 318 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 ADH4P08319 380 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 LGALS7P47929 136 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 GNG4P50150 75 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 NCBP2P52298 156 aaKnown RBP eCLIP5.07□□□□□ -1.6
SCN1A-216ENST00000637968 C19orf35Q6ZS72 473 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 MRGPREQ86SM8 312 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 MORN4Q8NDC4 146 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 RNF128Q8TEB7 428 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 WFDC12Q8WWY7 111 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 YPEL4Q96NS1 127 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 C16orf70Q9BSU1 422 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 CXorf36Q9H7Y0 433 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 GRIFINA4D1Z8 144 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 ZNF716A6NP11 495 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 MPZL1O95297 269 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 UTS2O95399 124 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 ZNF735P0CB33 412 aa5.07□□□□□ -1.6
SCN1A-216ENST00000637968 CCL2P13500 99 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms