RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 IL36RNQ9UBH0 155 aa14.86□□□□□ -0.03
CLN6-220ENST00000637450 HILPDAQ9Y5L2 63 aa14.86□□□□□ -0.03
CLN6-220ENST00000637450 LINC00312Q9Y6C7 94 aa14.86□□□□□ -0.03
CLN6-220ENST00000637450 SESN1Q9Y6P5 492 aa14.86□□□□□ -0.03
CLN6-220ENST00000637450 MINOS1-NBL1R4GNA1 71 aa14.86□□□□□ -0.03
CLN6-220ENST00000637450 PSPNO60542 156 aa14.85□□□□□ -0.03
CLN6-220ENST00000637450 UBCP0CG48 685 aaKnown RBP14.85□□□□□ -0.03
CLN6-220ENST00000637450 JUNBP17275 347 aaPredicted RBP14.85□□□□□ -0.03
CLN6-220ENST00000637450 GABRR1P24046 479 aa14.85□□□□□ -0.03
CLN6-220ENST00000637450 KIR3DL2P43630 455 aa14.85□□□□□ -0.03
CLN6-220ENST00000637450 NPBWR2P48146 333 aa14.85□□□□□ -0.03
CLN6-220ENST00000637450 RBP2P50120 134 aa14.85□□□□□ -0.03
CLN6-220ENST00000637450 ATP1B3P54709 279 aa14.85□□□□□ -0.03
CLN6-220ENST00000637450 BLCAPP62952 87 aa14.85□□□□□ -0.03
CLN6-220ENST00000637450 ZNF85Q03923 595 aa14.85□□□□□ -0.03
CLN6-220ENST00000637450 ZNF91Q05481 1191 aa14.85□□□□□ -0.03
CLN6-220ENST00000637450 ZNF146Q15072 292 aa14.85□□□□□ -0.03
CLN6-220ENST00000637450 GRK1Q15835 563 aa14.85□□□□□ -0.03
CLN6-220ENST00000637450 Q6ZS46 218 aa14.85□□□□□ -0.03
CLN6-220ENST00000637450 NDUFA11Q86Y39 141 aa14.85□□□□□ -0.03
CLN6-220ENST00000637450 FAM58AQ8N1B3 248 aa14.85□□□□□ -0.03
CLN6-220ENST00000637450 ZNF676Q8N7Q3 588 aa14.85□□□□□ -0.03
CLN6-220ENST00000637450 OR4S1Q8NGB4 309 aa14.85□□□□□ -0.03
CLN6-220ENST00000637450 EME1Q96AY2 570 aa14.85□□□□□ -0.03
CLN6-220ENST00000637450 GABARAPL3Q9BY60 117 aa14.85□□□□□ -0.03
CLN6-220ENST00000637450 CHST6Q9GZX3 395 aa14.85□□□□□ -0.03
CLN6-220ENST00000637450 MMP28Q9H239 520 aa14.85□□□□□ -0.03
CLN6-220ENST00000637450 RBFOX1Q9NWB1 397 aaKnown RBP14.85□□□□□ -0.03
CLN6-220ENST00000637450 PLXNB1O43157 2135 aa14.84□□□□□ -0.03
CLN6-220ENST00000637450 IGHV2-26A0A0B4J1V2 119 aa14.84□□□□□ -0.03
CLN6-220ENST00000637450 IGKV1-9A0A0C4DH69 117 aa14.84□□□□□ -0.03
CLN6-220ENST00000637450 TRBV2A0A0J9YWF9 115 aa14.84□□□□□ -0.03
CLN6-220ENST00000637450 ADARB2-AS1A8MUL3 147 aa14.84□□□□□ -0.03
CLN6-220ENST00000637450 FAM90A22PA8MWA6 464 aa14.84□□□□□ -0.03
CLN6-220ENST00000637450 XPNPEP2O43895 674 aa14.84□□□□□ -0.03
CLN6-220ENST00000637450 PRB2P02812 416 aaPredicted RBP14.84□□□□□ -0.03
CLN6-220ENST00000637450 BCL3P20749 454 aa14.84□□□□□ -0.03
CLN6-220ENST00000637450 DUSP1P28562 367 aa14.84□□□□□ -0.03
CLN6-220ENST00000637450 TP53I3Q53FA7 332 aa14.84□□□□□ -0.03
CLN6-220ENST00000637450 RFKQ969G6 155 aa14.84□□□□□ -0.03
CLN6-220ENST00000637450 ADAT3Q96EY9 351 aaPredicted RBP14.84□□□□□ -0.03
CLN6-220ENST00000637450 CITED2Q99967 270 aaPredicted RBP14.84□□□□□ -0.03
CLN6-220ENST00000637450 TMEM133Q9H2Q1 129 aa14.84□□□□□ -0.03
CLN6-220ENST00000637450 GNG8Q9UK08 70 aa14.84□□□□□ -0.03
CLN6-220ENST00000637450 F2RL2O00254 374 aa14.83□□□□□ -0.04
CLN6-220ENST00000637450 MGST3O14880 152 aa14.83□□□□□ -0.04
CLN6-220ENST00000637450 ENTPD6O75354 484 aa14.83□□□□□ -0.04
CLN6-220ENST00000637450 MMP23AO75900 390 aa14.83□□□□□ -0.04
CLN6-220ENST00000637450 FCGR1AP12314 374 aa14.83□□□□□ -0.04
CLN6-220ENST00000637450 ERP29P30040 261 aaKnown RBP14.83□□□□□ -0.04
CLN6-220ENST00000637450 MTCP1P56278 107 aa14.83□□□□□ -0.04
CLN6-220ENST00000637450 SLC34A1Q06495 639 aa14.83□□□□□ -0.04
CLN6-220ENST00000637450 TMEM244Q5VVB8 128 aa14.83□□□□□ -0.04
CLN6-220ENST00000637450 Q6ZPA2 131 aa14.83□□□□□ -0.04
CLN6-220ENST00000637450 ZBTB49Q6ZSB9 765 aa14.83□□□□□ -0.04
CLN6-220ENST00000637450 UTS2BQ765I0 119 aa14.83□□□□□ -0.04
CLN6-220ENST00000637450 FAM220AQ7Z4H9 259 aa14.83□□□□□ -0.04
CLN6-220ENST00000637450 REC114Q7Z4M0 266 aa14.83□□□□□ -0.04
CLN6-220ENST00000637450 OR4F17Q8NGA8 305 aa14.83□□□□□ -0.04
CLN6-220ENST00000637450 R3HDM4Q96D70 268 aa14.83□□□□□ -0.04
CLN6-220ENST00000637450 OR4F4Q96R69 305 aa14.83□□□□□ -0.04
CLN6-220ENST00000637450 OR5M11Q96RB7 305 aa14.83□□□□□ -0.04
CLN6-220ENST00000637450 CLEC7AQ9BXN2 247 aa14.83□□□□□ -0.04
CLN6-220ENST00000637450 RIBC2Q9H4K1 309 aa14.83□□□□□ -0.04
CLN6-220ENST00000637450 PEX14O75381 377 aa14.82□□□□□ -0.04
CLN6-220ENST00000637450 CYB5AP00167 134 aa14.82□□□□□ -0.04
CLN6-220ENST00000637450 CALCBP10092 127 aa14.82□□□□□ -0.04
CLN6-220ENST00000637450 ATF1P18846 271 aa14.82□□□□□ -0.04
CLN6-220ENST00000637450 PRKACBP22694 351 aa14.82□□□□□ -0.04
CLN6-220ENST00000637450 AZGP1P25311 298 aaKnown RBP14.82□□□□□ -0.04
CLN6-220ENST00000637450 OR3A1P47881 315 aa14.82□□□□□ -0.04
CLN6-220ENST00000637450 POU3F4P49335 361 aa14.82□□□□□ -0.04
CLN6-220ENST00000637450 CDC42P60953 191 aa14.82□□□□□ -0.04
CLN6-220ENST00000637450 PDZK1IP1Q13113 114 aa14.82□□□□□ -0.04
CLN6-220ENST00000637450 OXLD1Q5BKU9 147 aa14.82□□□□□ -0.04
CLN6-220ENST00000637450 SPIN3Q5JUX0 258 aa14.82□□□□□ -0.04
CLN6-220ENST00000637450 C1orf146Q5VVC0 180 aa14.82□□□□□ -0.04
CLN6-220ENST00000637450 OR4P4Q8NGL7 312 aa14.82□□□□□ -0.04
CLN6-220ENST00000637450 OR2G2Q8NGZ5 317 aa14.82□□□□□ -0.04
CLN6-220ENST00000637450 NDNFQ8TB73 568 aa14.82□□□□□ -0.04
CLN6-220ENST00000637450 FGGYQ96C11 551 aa14.82□□□□□ -0.04
CLN6-220ENST00000637450 CENPNQ96H22 339 aaPredicted RBP14.82□□□□□ -0.04
CLN6-220ENST00000637450 OCSTAMPQ9BR26 566 aa14.82□□□□□ -0.04
CLN6-220ENST00000637450 OSBPL10Q9BXB5 764 aa14.82□□□□□ -0.04
CLN6-220ENST00000637450 FAM53CQ9NYF3 392 aa14.82□□□□□ -0.04
CLN6-220ENST00000637450 FRRS1LQ9P0K9 344 aa14.82□□□□□ -0.04
CLN6-220ENST00000637450 GLS2Q9UI32 602 aa14.82□□□□□ -0.04
CLN6-220ENST00000637450 OAZ3Q9UMX2 235 aa14.82□□□□□ -0.04
CLN6-220ENST00000637450 UBE2J1Q9Y385 318 aaPredicted RBP14.82□□□□□ -0.04
CLN6-220ENST00000637450 H3BUI4 141 aa14.81□□□□□ -0.04
CLN6-220ENST00000637450 ISG15P05161 165 aa14.81□□□□□ -0.04
CLN6-220ENST00000637450 PRKACAP17612 351 aa14.81□□□□□ -0.04
CLN6-220ENST00000637450 HTR1DP28221 377 aa14.81□□□□□ -0.04
CLN6-220ENST00000637450 VDAC2P45880 294 aaPredicted RBP14.81□□□□□ -0.04
CLN6-220ENST00000637450 RASSF2P50749 326 aa14.81□□□□□ -0.04
CLN6-220ENST00000637450 P2RX3P56373 397 aa14.81□□□□□ -0.04
CLN6-220ENST00000637450 FDX2Q6P4F2 183 aa14.81□□□□□ -0.04
CLN6-220ENST00000637450 LHFPL2Q6ZUX7 228 aa14.81□□□□□ -0.04
CLN6-220ENST00000637450 KCTD20Q7Z5Y7 419 aa14.81□□□□□ -0.04
CLN6-220ENST00000637450 TRUB1Q8WWH5 349 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms