RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 FAM240AA0A1B0GVK7 77 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 A0A1B0GX51 115 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 SMKR1H3BMG3 65 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 RHODO00212 210 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 FCN1O00602 326 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 COPEO14579 308 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 WNT9BO14905 357 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 FKBP6O75344 327 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 CRLF1O75462 422 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 TRMUO75648 421 aaKnown RBP2.49□□□□□ -2.01
VIM-210ENST00000637053 MMP23AO75900 390 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 NCR1O76036 304 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 IGHV2-5P01817 119 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 APOA2P02652 100 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 WNT1P04628 370 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 ATP1B1P05026 303 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 LGALS2P05162 132 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 FGF1P05230 155 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 REG1AP05451 166 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 GKN3PP0CG01 181 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 FAM157CP0CG43 387 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 ZNF250P15622 560 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 WT1P19544 449 aaPredicted RBP2.49□□□□□ -2.01
VIM-210ENST00000637053 TCN2P20062 427 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 CDK2P24941 298 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 NPY1RP25929 384 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 IL12AP29459 219 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 GPR183P32249 361 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 OR1D5P58170 312 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 BTG1P62324 171 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 GNG5P63218 68 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 SRSF4Q08170 494 aaKnown RBP2.49□□□□□ -2.01
VIM-210ENST00000637053 CLINT1Q14677 625 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 RAB35Q15286 201 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 SCGB2B2Q4G0G5 96 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 VAX1Q5SQQ9 334 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 TMEM69Q5SWH9 247 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 TPTE2P1Q5T6R2 138 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 FHL5Q5TD97 284 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 B3GNTL1Q67FW5 361 aaPredicted RBP2.49□□□□□ -2.01
VIM-210ENST00000637053 ALKAL1Q6UXT8 129 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 ZNF730Q6ZMV8 503 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 SHFQ7M4L6 423 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 OAFQ86UD1 273 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 HOGA1Q86XE5 327 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 UBALD2Q8IYN6 164 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 H1FOOQ8IZA3 346 aaPredicted RBP2.49□□□□□ -2.01
VIM-210ENST00000637053 PNKDQ8N490 385 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 C11orf42Q8N5U0 333 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 COX18Q8N8Q8 333 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 TEX45Q8NA69 505 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 OR2T12Q8NG77 320 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 OR52L1Q8NGH7 329 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 OR10G7Q8NGN6 311 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 OR13A1Q8NGR1 328 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 OR2G2Q8NGZ5 317 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 OR5P3Q8WZ94 311 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 SLC7A6Q92536 515 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 DCUN1D4Q92564 292 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 ARPC1AQ92747 370 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 BORCS7Q96B45 105 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 RNF157Q96PX1 679 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 SORT1Q99523 831 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 GPR21Q99679 349 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 NDFIP1Q9BT67 221 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 SUCNR1Q9BXA5 334 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 C20orf27Q9GZN8 174 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 COA1Q9GZY4 146 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 RNASE7Q9H1E1 156 aaKnown RBP2.49□□□□□ -2.01
VIM-210ENST00000637053 SH3BGRL3Q9H299 93 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 CDC42EP4Q9H3Q1 356 aaKnown RBP2.49□□□□□ -2.01
VIM-210ENST00000637053 PTGES2Q9H7Z7 377 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 EFCAB1Q9HAE3 211 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 POPDC3Q9HBV1 291 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 SH2D2AQ9NP31 389 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 MEPEQ9NQ76 525 aaPredicted RBP2.49□□□□□ -2.01
VIM-210ENST00000637053 RBM22Q9NW64 420 aaKnown RBP eCLIP2.49□□□□□ -2.01
VIM-210ENST00000637053 TAS2R5Q9NYW4 299 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 WRAP73Q9P2S5 460 aaPredicted RBP2.49□□□□□ -2.01
VIM-210ENST00000637053 RSL24D1Q9UHA3 163 aaKnown RBP2.49□□□□□ -2.01
VIM-210ENST00000637053 TRAPPC2LQ9UL33 140 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 TNFSF18Q9UNG2 199 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 PKIGQ9Y2B9 76 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 LAMTOR2Q9Y2Q5 125 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 HDGFL3Q9Y3E1 203 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 CHST2Q9Y4C5 530 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 TAF1P21675 1872 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 NAV1Q8NEY1 1877 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 CLIP1P30622 1438 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 TNS3Q68CZ2 1445 aa2.49□□□□□ -2.01
VIM-210ENST00000637053 NEDD4P46934 1319 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 ARHGAP23Q9P227 1491 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 IGLV3-22A0A075B6J6 115 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 TRGV11A0A075B6L2 103 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 TRAV36DV7A0A075B6V5 113 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 A0A087WUU8 490 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 IGHV2OR16-5A0A0B4J2B6 119 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 A0A0G2JN53 185 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 CIB4A0PJX0 185 aa2.48□□□□□ -2.01
VIM-210ENST00000637053 TMEM218A2RU14 115 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms