RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 PLPPR5Q32ZL2 321 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 RAET1LQ5VY80 246 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 TMPPEQ6ZT21 453 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 C17orf82Q86X59 251 aaPredicted RBP3.49□□□□□ -1.85
SCN1A-214ENST00000637038 CBLN2Q8IUK8 224 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 OR5AS1Q8N127 324 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 GPR137CQ8N3F9 429 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 PAQR4Q8N4S7 273 aaPredicted RBP3.49□□□□□ -1.85
SCN1A-214ENST00000637038 FAM89BQ8N5H3 189 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 SGMS2Q8NHU3 365 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 RNASE11Q8TAA1 199 aaKnown RBP3.49□□□□□ -1.85
SCN1A-214ENST00000637038 NPRL2Q8WTW4 380 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 SPACA9Q96E40 222 aaPredicted RBP3.49□□□□□ -1.85
SCN1A-214ENST00000637038 GNPNAT1Q96EK6 184 aaPredicted RBP3.49□□□□□ -1.85
SCN1A-214ENST00000637038 ZNF799Q96GE5 643 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 ABHD14BQ96IU4 210 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 WDR13Q9H1Z4 485 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 CTSFQ9UBX1 484 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 UBE2J1Q9Y385 318 aaPredicted RBP3.49□□□□□ -1.85
SCN1A-214ENST00000637038 LHFPL6Q9Y693 200 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 FRYQ5TBA9 3013 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 MEX3AA1L020 520 aaKnown RBP3.48□□□□□ -1.85
SCN1A-214ENST00000637038 LRP5LA4QPB2 252 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 SDCBPO00560 298 aaPredicted RBP3.48□□□□□ -1.85
SCN1A-214ENST00000637038 DHHO43323 396 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 DNPH1O43598 174 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 LMX1BO60663 402 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 DEDDO75618 318 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 SCRG1O75711 98 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 IFNA5P01569 189 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 KLK3P07288 261 aaPredicted RBP3.48□□□□□ -1.85
SCN1A-214ENST00000637038 SLC2A1P11166 492 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 FOLR1P15328 257 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 MUC1P15941 1255 aaPredicted RBP3.48□□□□□ -1.85
SCN1A-214ENST00000637038 CTSSP25774 331 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 RBP2P50120 134 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 P2RY4P51582 365 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 RAB35Q15286 201 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 GUK1Q16774 197 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 EIF2S3LQ2VIR3 472 aaKnown RBP3.48□□□□□ -1.85
SCN1A-214ENST00000637038 SOHLH1Q5JUK2 328 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 GGNBP1Q5YKI7 109 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 TCEAL6Q6IPX3 200 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 RPUSD3Q6P087 351 aaKnown RBP3.48□□□□□ -1.85
SCN1A-214ENST00000637038 LANCL3Q6ZV70 420 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 OR14K1Q8NGZ2 314 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 OR14L1PQ8NHC6 308 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 CPT1CQ8TCG5 803 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 SPACA5Q96QH8 159 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 ZNF251Q9BRH9 671 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 RNF126Q9BV68 326 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 DDA1Q9BW61 102 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 RBM24Q9BX46 236 aaKnown RBP3.48□□□□□ -1.85
SCN1A-214ENST00000637038 MRPL13Q9BYD1 178 aaKnown RBP3.48□□□□□ -1.85
SCN1A-214ENST00000637038 TMEM231Q9H6L2 316 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 ZNF442Q9H7R0 627 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 OR5AC2Q9NZP5 309 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 ANXA10Q9UJ72 324 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 HSF4Q9ULV5 492 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 CNOT1A5YKK6 2376 aaKnown RBP3.48□□□□□ -1.85
SCN1A-214ENST00000637038 NCKAP5O14513 1909 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 A0A1W2PR77 199 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 CRYM-AS1A6NIL9 109 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 ETV2O00321 342 aaPredicted RBP3.48□□□□□ -1.85
SCN1A-214ENST00000637038 IFNA1P01562 189 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 LCATP04180 440 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 CRYBA1P05813 215 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 HPNP05981 417 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 CTXN2P0C2S0 81 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 HKR1P10072 659 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 ZNF44P15621 663 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 PI3P19957 117 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 HNF1AP20823 631 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 BCKDHBP21953 392 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 PIGPP57054 158 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 ANKRD55Q3KP44 614 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 ARSJQ5FYB0 599 aaPredicted RBP3.48□□□□□ -1.85
SCN1A-214ENST00000637038 AKR1C8PQ5T2L2 129 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 LHFPL1Q86WI0 220 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 ZNF695Q8IW36 515 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 CMTM1Q8IZ96 169 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 TMEM156Q8N614 296 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 OR56B2PQ8NGI1 322 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 OR5D18Q8NGL1 313 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 RXFP4Q8TDU9 374 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 RTN4IP1Q8WWV3 396 aaPredicted RBP3.48□□□□□ -1.85
SCN1A-214ENST00000637038 RLN3Q8WXF3 142 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 HIST1H2AAQ96QV6 131 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 FOXC2Q99958 501 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 WDR77Q9BQA1 342 aaPredicted RBP3.48□□□□□ -1.85
SCN1A-214ENST00000637038 SMIM3Q9BZL3 60 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 TLNRD1Q9H1K6 362 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 TUBA4BQ9H853 241 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 CYTL1Q9NRR1 136 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 C19orf12Q9NSK7 152 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 CFAP47Q6ZTR5 3102 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 DUXBA0A1W2PPF3 345 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 H3BMH7 237 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 RER1O15258 196 aa3.48□□□□□ -1.85
SCN1A-214ENST00000637038 TRAF3IP2O43734 574 aaPredicted RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms