RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 DOK1Q99704 481 aa15.83■□□□□ 0.13
CACNA1A-227ENST00000636549 RBFOX1Q9NWB1 397 aaKnown RBP15.83■□□□□ 0.13
CACNA1A-227ENST00000636549 ETV6P41212 452 aa15.83■□□□□ 0.12
CACNA1A-227ENST00000636549 B2MP61769 119 aa15.83■□□□□ 0.12
CACNA1A-227ENST00000636549 GPNMBQ14956 572 aa15.83■□□□□ 0.12
CACNA1A-227ENST00000636549 MMDQ15546 238 aa15.83■□□□□ 0.12
CACNA1A-227ENST00000636549 CENPVQ7Z7K6 275 aaPredicted RBP15.83■□□□□ 0.12
CACNA1A-227ENST00000636549 SLC25A21Q9BQT8 299 aaPredicted RBP15.83■□□□□ 0.12
CACNA1A-227ENST00000636549 ZNF552Q9H707 407 aaPredicted RBP15.83■□□□□ 0.12
CACNA1A-227ENST00000636549 NUP98P52948 1817 aa15.83■□□□□ 0.12
CACNA1A-227ENST00000636549 FKBP2P26885 142 aaKnown RBP15.83■□□□□ 0.12
CACNA1A-227ENST00000636549 SCARB1Q8WTV0 552 aa15.83■□□□□ 0.12
CACNA1A-227ENST00000636549 PHIPQ8WWQ0 1821 aa15.83■□□□□ 0.12
CACNA1A-227ENST00000636549 FAM24AA6NFZ4 105 aa15.83■□□□□ 0.12
CACNA1A-227ENST00000636549 DLX1P56177 255 aa15.83■□□□□ 0.12
CACNA1A-227ENST00000636549 TM4SF20Q53R12 229 aa15.83■□□□□ 0.12
CACNA1A-227ENST00000636549 FAM210BQ96KR6 192 aa15.83■□□□□ 0.12
CACNA1A-227ENST00000636549 C16orf92Q96LL3 132 aa15.83■□□□□ 0.12
CACNA1A-227ENST00000636549 TMEM38AQ9H6F2 299 aa15.83■□□□□ 0.12
CACNA1A-227ENST00000636549 FCN1O00602 326 aa15.83■□□□□ 0.12
CACNA1A-227ENST00000636549 ZNF737O75373 536 aa15.83■□□□□ 0.12
CACNA1A-227ENST00000636549 JTBO76095 146 aa15.83■□□□□ 0.12
CACNA1A-227ENST00000636549 AESQ08117 197 aa15.83■□□□□ 0.12
CACNA1A-227ENST00000636549 PJVKQ0ZLH3 352 aa15.83■□□□□ 0.12
CACNA1A-227ENST00000636549 TRDV1A0A1B0GX56 115 aa15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 PYCARD-AS1I3L0S3 204 aa15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 UBE2L3P68036 154 aaKnown RBP15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 FAM78BQ5VT40 261 aa15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 CYSLTR2Q9NS75 346 aa15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 ZDHHC8Q9ULC8 765 aa15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 OR2T8A6NH00 312 aa15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 MELTFP08582 738 aa15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 CSF2RBP32927 897 aa15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 TOMM34Q15785 309 aaPredicted RBP15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 SSX1Q16384 188 aa15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 MIDNQ504T8 468 aa15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 SPANXN1Q5VSR9 72 aa15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 OR4P4Q8NGL7 312 aa15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 MMP24Q9Y5R2 645 aa15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 ASCC3Q8N3C0 2202 aaKnown RBP15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 TMEM272A0A1B0GTI8 110 aa15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 GCGP01275 180 aa15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 NUBP1P53384 320 aa15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 KISS1Q15726 138 aa15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 C11orf44Q8N8P7 122 aa15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 PPP1R1CQ8WVI7 109 aa15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 KIR2DL1P43626 348 aaPredicted RBP15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 KIR2DL2P43627 348 aaPredicted RBP15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 EMC4Q5J8M3 183 aa15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 PCED1AQ9H1Q7 454 aa15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 IGHA1P01876 353 aa15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 IGHA2P01877 340 aa15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 METTL26Q96S19 204 aa15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 CMC2Q9NRP2 79 aa15.82■□□□□ 0.12
CACNA1A-227ENST00000636549 IGHV3-35A0A0C4DH35 117 aa15.81■□□□□ 0.12
CACNA1A-227ENST00000636549 ZNF738Q8NE65 137 aa15.81■□□□□ 0.12
CACNA1A-227ENST00000636549 C2orf50Q96LR7 162 aa15.81■□□□□ 0.12
CACNA1A-227ENST00000636549 IL21Q9HBE4 155 aa15.81■□□□□ 0.12
CACNA1A-227ENST00000636549 C3orf85A0A1B0GTC6 90 aa15.81■□□□□ 0.12
CACNA1A-227ENST00000636549 ADAM11O75078 769 aa15.81■□□□□ 0.12
CACNA1A-227ENST00000636549 GIPP09681 153 aaPredicted RBP15.81■□□□□ 0.12
CACNA1A-227ENST00000636549 RPL29P47914 159 aaKnown RBP15.81■□□□□ 0.12
CACNA1A-227ENST00000636549 GCSAMLQ5JQS6 135 aa15.81■□□□□ 0.12
CACNA1A-227ENST00000636549 ATP1A1-AS1Q5TC04 95 aa15.81■□□□□ 0.12
CACNA1A-227ENST00000636549 MRPS11P82912 194 aaKnown RBP15.81■□□□□ 0.12
CACNA1A-227ENST00000636549 PSG5Q15238 335 aa15.81■□□□□ 0.12
CACNA1A-227ENST00000636549 Q6ZN92 141 aa15.81■□□□□ 0.12
CACNA1A-227ENST00000636549 STXBP6Q8NFX7 210 aa15.81■□□□□ 0.12
CACNA1A-227ENST00000636549 OR1L1Q8NH94 360 aa15.81■□□□□ 0.12
CACNA1A-227ENST00000636549 ZBTB44Q8NCP5 570 aa15.81■□□□□ 0.12
CACNA1A-227ENST00000636549 OR4C16Q8NGL9 310 aa15.81■□□□□ 0.12
CACNA1A-227ENST00000636549 SLC25A46Q96AG3 418 aa15.81■□□□□ 0.12
CACNA1A-227ENST00000636549 UQCC1Q9NVA1 299 aa15.81■□□□□ 0.12
CACNA1A-227ENST00000636549 SCN3AQ9NY46 2000 aa15.81■□□□□ 0.12
CACNA1A-227ENST00000636549 DYNLT3P51808 116 aa15.81■□□□□ 0.12
CACNA1A-227ENST00000636549 STARD4Q96DR4 205 aa15.81■□□□□ 0.12
CACNA1A-227ENST00000636549 KNDC1Q76NI1 1749 aa15.81■□□□□ 0.12
CACNA1A-227ENST00000636549 KRTCAP3Q53RY4 240 aa15.8■□□□□ 0.12
CACNA1A-227ENST00000636549 GVQW1Q8N7I0 195 aa15.8■□□□□ 0.12
CACNA1A-227ENST00000636549 KCTD12Q96CX2 325 aaKnown RBP15.8■□□□□ 0.12
CACNA1A-227ENST00000636549 RHNO1Q9BSD3 238 aa15.8■□□□□ 0.12
CACNA1A-227ENST00000636549 CLN8Q9UBY8 286 aa15.8■□□□□ 0.12
CACNA1A-227ENST00000636549 GPR6P46095 362 aaPredicted RBP15.8■□□□□ 0.12
CACNA1A-227ENST00000636549 HAND1O96004 215 aa15.8■□□□□ 0.12
CACNA1A-227ENST00000636549 ID1P41134 155 aa15.8■□□□□ 0.12
CACNA1A-227ENST00000636549 DUSP18Q8NEJ0 188 aa15.8■□□□□ 0.12
CACNA1A-227ENST00000636549 RHOXF1Q8NHV9 184 aa15.8■□□□□ 0.12
CACNA1A-227ENST00000636549 MRPS14O60783 128 aaKnown RBP15.8■□□□□ 0.12
CACNA1A-227ENST00000636549 OR5C1Q8NGR4 320 aa15.8■□□□□ 0.12
CACNA1A-227ENST00000636549 TBX15Q96SF7 602 aa15.8■□□□□ 0.12
CACNA1A-227ENST00000636549 PSMB11A5LHX3 300 aa15.8■□□□□ 0.12
CACNA1A-227ENST00000636549 OR5AC1P0C628 307 aa15.8■□□□□ 0.12
CACNA1A-227ENST00000636549 LFNGQ8NES3 379 aa15.8■□□□□ 0.12
CACNA1A-227ENST00000636549 SFTA3P0C7M3 94 aa15.79■□□□□ 0.12
CACNA1A-227ENST00000636549 ATP5J2P56134 94 aa15.79■□□□□ 0.12
CACNA1A-227ENST00000636549 PRB3Q04118 309 aaPredicted RBP15.79■□□□□ 0.12
CACNA1A-227ENST00000636549 MRPL54Q6P161 138 aaKnown RBP15.79■□□□□ 0.12
CACNA1A-227ENST00000636549 ZNF66Q6ZN08 573 aa15.79■□□□□ 0.12
CACNA1A-227ENST00000636549 LYG2Q86SG7 212 aa15.79■□□□□ 0.12
CACNA1A-227ENST00000636549 OR4X1Q8NH49 305 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms