RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 GDPD3Q7L5L3 318 aa15□□□□□ -0.01
CLN6-214ENST00000636314 OR8H2Q8N162 312 aa15□□□□□ -0.01
CLN6-214ENST00000636314 OR5AK2Q8NH90 309 aa15□□□□□ -0.01
CLN6-214ENST00000636314 TSEN15Q8WW01 171 aaKnown RBP15□□□□□ -0.01
CLN6-214ENST00000636314 CYGBQ8WWM9 190 aa15□□□□□ -0.01
CLN6-214ENST00000636314 RFT1Q96AA3 541 aa15□□□□□ -0.01
CLN6-214ENST00000636314 C1RLQ9NZP8 487 aa15□□□□□ -0.01
CLN6-214ENST00000636314 IL36RNQ9UBH0 155 aa15□□□□□ -0.01
CLN6-214ENST00000636314 WNK1Q9H4A3 2382 aa15□□□□□ -0.01
CLN6-214ENST00000636314 DSCAML1Q8TD84 2053 aa15□□□□□ -0.01
CLN6-214ENST00000636314 E9PI62 339 aa14.99□□□□□ -0.01
CLN6-214ENST00000636314 M0QZ24 198 aa14.99□□□□□ -0.01
CLN6-214ENST00000636314 ZFPL1O95159 310 aa14.99□□□□□ -0.01
CLN6-214ENST00000636314 NDUFA7O95182 113 aa14.99□□□□□ -0.01
CLN6-214ENST00000636314 CLIC3O95833 236 aa14.99□□□□□ -0.01
CLN6-214ENST00000636314 PRKACAP17612 351 aa14.99□□□□□ -0.01
CLN6-214ENST00000636314 PEX2P28328 305 aa14.99□□□□□ -0.01
CLN6-214ENST00000636314 NPBWR2P48146 333 aa14.99□□□□□ -0.01
CLN6-214ENST00000636314 OLFML2AQ68BL7 652 aa14.99□□□□□ -0.01
CLN6-214ENST00000636314 HCP5Q6MZN7 132 aa14.99□□□□□ -0.01
CLN6-214ENST00000636314 FAM58AQ8N1B3 248 aa14.99□□□□□ -0.01
CLN6-214ENST00000636314 PACRGLQ8N7B6 248 aa14.99□□□□□ -0.01
CLN6-214ENST00000636314 CNIH3Q8TBE1 160 aa14.99□□□□□ -0.01
CLN6-214ENST00000636314 SNX22Q96L94 193 aa14.99□□□□□ -0.01
CLN6-214ENST00000636314 SPACA5Q96QH8 159 aa14.99□□□□□ -0.01
CLN6-214ENST00000636314 PDCD1LG2Q9BQ51 273 aa14.99□□□□□ -0.01
CLN6-214ENST00000636314 JAM3Q9BX67 310 aa14.99□□□□□ -0.01
CLN6-214ENST00000636314 MMP27Q9H306 513 aa14.99□□□□□ -0.01
CLN6-214ENST00000636314 ZCCHC4Q9H5U6 513 aa14.99□□□□□ -0.01
CLN6-214ENST00000636314 HEXA-AS1Q9H8Q6 139 aa14.99□□□□□ -0.01
CLN6-214ENST00000636314 FGF20Q9NP95 211 aaPredicted RBP14.99□□□□□ -0.01
CLN6-214ENST00000636314 VPREB3Q9UKI3 123 aa14.99□□□□□ -0.01
CLN6-214ENST00000636314 DHDHQ9UQ10 334 aa14.99□□□□□ -0.01
CLN6-214ENST00000636314 IRGMA1A4Y4 181 aa14.98□□□□□ -0.01
CLN6-214ENST00000636314 MT-ND2P03891 347 aa14.98□□□□□ -0.01
CLN6-214ENST00000636314 HCKP08631 526 aa14.98□□□□□ -0.01
CLN6-214ENST00000636314 LIMS3P0CW19 117 aa14.98□□□□□ -0.01
CLN6-214ENST00000636314 LIMS4P0CW20 117 aa14.98□□□□□ -0.01
CLN6-214ENST00000636314 GABRR1P24046 479 aa14.98□□□□□ -0.01
CLN6-214ENST00000636314 COX7A1P24310 79 aa14.98□□□□□ -0.01
CLN6-214ENST00000636314 SNU13P55769 128 aaKnown RBP14.98□□□□□ -0.01
CLN6-214ENST00000636314 ERVFRD-1P60508 538 aa14.98□□□□□ -0.01
CLN6-214ENST00000636314 RELBQ01201 579 aa14.98□□□□□ -0.01
CLN6-214ENST00000636314 PDZK1IP1Q13113 114 aa14.98□□□□□ -0.01
CLN6-214ENST00000636314 EDDM3AQ14507 147 aa14.98□□□□□ -0.01
CLN6-214ENST00000636314 TAF9Q16594 264 aa14.98□□□□□ -0.01
CLN6-214ENST00000636314 SPIN3Q5JUX0 258 aa14.98□□□□□ -0.01
CLN6-214ENST00000636314 TTC23Q5W5X9 447 aa14.98□□□□□ -0.01
CLN6-214ENST00000636314 GDPGP1Q6ZNW5 385 aa14.98□□□□□ -0.01
CLN6-214ENST00000636314 SETD9Q8NE22 299 aa14.98□□□□□ -0.01
CLN6-214ENST00000636314 OR5D18Q8NGL1 313 aa14.98□□□□□ -0.01
CLN6-214ENST00000636314 GLS2Q9UI32 602 aa14.98□□□□□ -0.01
CLN6-214ENST00000636314 TMEM82A0PJX8 343 aa14.97□□□□□ -0.01
CLN6-214ENST00000636314 TIMM23O14925 209 aa14.97□□□□□ -0.01
CLN6-214ENST00000636314 SULT1B1O43704 296 aa14.97□□□□□ -0.01
CLN6-214ENST00000636314 CALCBP10092 127 aa14.97□□□□□ -0.01
CLN6-214ENST00000636314 DCKP27707 260 aa14.97□□□□□ -0.01
CLN6-214ENST00000636314 DUSP1P28562 367 aa14.97□□□□□ -0.01
CLN6-214ENST00000636314 ZNF146Q15072 292 aa14.97□□□□□ -0.01
CLN6-214ENST00000636314 GRK1Q15835 563 aa14.97□□□□□ -0.01
CLN6-214ENST00000636314 ZNF782Q6ZMW2 699 aaPredicted RBP14.97□□□□□ -0.01
CLN6-214ENST00000636314 SERPINA12Q8IW75 414 aa14.97□□□□□ -0.01
CLN6-214ENST00000636314 C11orf42Q8N5U0 333 aa14.97□□□□□ -0.01
CLN6-214ENST00000636314 ZSCAN4Q8NAM6 433 aaPredicted RBP14.97□□□□□ -0.01
CLN6-214ENST00000636314 BEND2Q8NDZ0 799 aa14.97□□□□□ -0.01
CLN6-214ENST00000636314 OR5D14Q8NGL3 314 aa14.97□□□□□ -0.01
CLN6-214ENST00000636314 OR5R1Q8NH85 324 aa14.97□□□□□ -0.01
CLN6-214ENST00000636314 CITED1Q99966 193 aa14.97□□□□□ -0.01
CLN6-214ENST00000636314 CHST6Q9GZX3 395 aa14.97□□□□□ -0.01
CLN6-214ENST00000636314 SEBOXQ9HB31 216 aaPredicted RBP14.97□□□□□ -0.01
CLN6-214ENST00000636314 PCDHGB5Q9Y5G0 923 aa14.97□□□□□ -0.01
CLN6-214ENST00000636314 MEX3AA1L020 520 aaKnown RBP14.96□□□□□ -0.01
CLN6-214ENST00000636314 CLPSL1A2RUU4 121 aa14.96□□□□□ -0.01
CLN6-214ENST00000636314 MYL12AP19105 171 aa14.96□□□□□ -0.01
CLN6-214ENST00000636314 ETV1P50549 477 aa14.96□□□□□ -0.01
CLN6-214ENST00000636314 GTF2A1P52655 376 aaPredicted RBP14.96□□□□□ -0.01
CLN6-214ENST00000636314 DHRS7BQ6IAN0 325 aaPredicted RBP14.96□□□□□ -0.01
CLN6-214ENST00000636314 TMPRSS11AQ6ZMR5 421 aa14.96□□□□□ -0.01
CLN6-214ENST00000636314 DHRSXQ8N5I4 330 aa14.96□□□□□ -0.01
CLN6-214ENST00000636314 PARP16Q8N5Y8 322 aa14.96□□□□□ -0.01
CLN6-214ENST00000636314 PPP1R35Q8TAP8 253 aa14.96□□□□□ -0.01
CLN6-214ENST00000636314 C17orf50Q8WW18 174 aa14.96□□□□□ -0.01
CLN6-214ENST00000636314 HMG20AQ9NP66 347 aa14.96□□□□□ -0.01
CLN6-214ENST00000636314 EXOSC4Q9NPD3 245 aaKnown RBP14.96□□□□□ -0.01
CLN6-214ENST00000636314 GSTK1Q9Y2Q3 226 aa14.96□□□□□ -0.01
CLN6-214ENST00000636314 IGKV1-12A0A0C4DH73 117 aa14.95□□□□□ -0.02
CLN6-214ENST00000636314 hADV38S2A0JD32 116 aa14.95□□□□□ -0.02
CLN6-214ENST00000636314 C17orf98A8MV24 154 aa14.95□□□□□ -0.02
CLN6-214ENST00000636314 KDM4BO94953 1096 aa14.95□□□□□ -0.02
CLN6-214ENST00000636314 IGKV1D-12P01611 117 aa14.95□□□□□ -0.02
CLN6-214ENST00000636314 RBP4P02753 201 aa14.95□□□□□ -0.02
CLN6-214ENST00000636314 ZNF728P0DKX0 622 aa14.95□□□□□ -0.02
CLN6-214ENST00000636314 BMXP51813 675 aa14.95□□□□□ -0.02
CLN6-214ENST00000636314 DLX6P56179 175 aa14.95□□□□□ -0.02
CLN6-214ENST00000636314 LGALS4P56470 323 aa14.95□□□□□ -0.02
CLN6-214ENST00000636314 MEF2CQ06413 473 aaPredicted RBP14.95□□□□□ -0.02
CLN6-214ENST00000636314 CDK5R1Q15078 307 aa14.95□□□□□ -0.02
CLN6-214ENST00000636314 CCDC58Q4VC31 144 aa14.95□□□□□ -0.02
CLN6-214ENST00000636314 OR2G6Q5TZ20 316 aa14.95□□□□□ -0.02
CLN6-214ENST00000636314 RNF144BQ7Z419 303 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms