RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	FRZB	Q92765	325 aa		12.57	□□□□□ -0.4
NEDD4L-238	ENST00000635997	CTHRC1	Q96CG8	243 aa		12.57	□□□□□ -0.4
NEDD4L-238	ENST00000635997	FOXJ3	Q9UPW0	622 aa		12.57	□□□□□ -0.4
NEDD4L-238	ENST00000635997	ZNF646	O15015	1829 aa	Predicted RBP	12.56	□□□□□ -0.4
NEDD4L-238	ENST00000635997	PTP4A3	O75365	173 aa		12.56	□□□□□ -0.4
NEDD4L-238	ENST00000635997	S100P	P25815	95 aa		12.56	□□□□□ -0.4
NEDD4L-238	ENST00000635997	IL3RA	P26951	378 aa		12.56	□□□□□ -0.4
NEDD4L-238	ENST00000635997	IRF3	Q14653	427 aa		12.56	□□□□□ -0.4
NEDD4L-238	ENST00000635997	GLRX5	Q86SX6	157 aa		12.56	□□□□□ -0.4
NEDD4L-238	ENST00000635997	SLC26A10	Q8NG04	563 aa		12.56	□□□□□ -0.4
NEDD4L-238	ENST00000635997	CHD5	Q8TDI0	1954 aa		12.56	□□□□□ -0.4
NEDD4L-238	ENST00000635997	PLA2G10	O15496	165 aa		12.56	□□□□□ -0.4
NEDD4L-238	ENST00000635997	FABP1	P07148	127 aa		12.56	□□□□□ -0.4
NEDD4L-238	ENST00000635997	SLC16A13	Q7RTY0	426 aa		12.56	□□□□□ -0.4
NEDD4L-238	ENST00000635997	GALM	Q96C23	342 aa		12.56	□□□□□ -0.4
NEDD4L-238	ENST00000635997	SLC39A9	Q9NUM3	307 aa		12.56	□□□□□ -0.4
NEDD4L-238	ENST00000635997	PUS1	Q9Y606	427 aa	Known RBP eCLIP	12.56	□□□□□ -0.4
NEDD4L-238	ENST00000635997		A0A1W2PPH5	198 aa		12.56	□□□□□ -0.4
NEDD4L-238	ENST00000635997	LINC00862	A6NCI5	91 aa		12.56	□□□□□ -0.4
NEDD4L-238	ENST00000635997	RRAS	P10301	218 aa		12.56	□□□□□ -0.4
NEDD4L-238	ENST00000635997	RBMXL3	Q8N7X1	1067 aa	Known RBP	12.56	□□□□□ -0.4
NEDD4L-238	ENST00000635997	SSC4D	Q8WTU2	575 aa		12.56	□□□□□ -0.4
NEDD4L-238	ENST00000635997		A0A0D9SG52	128 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	TERT	O14746	1132 aa	Known RBP	12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	TBX6	O95947	436 aa	Predicted RBP	12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	NANOS3	P60323	173 aa	Known RBP	12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	RPL11	P62913	178 aa	Known RBP	12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	PDZK1IP1	Q13113	114 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	SNTB1	Q13884	538 aa	Known RBP	12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	PCOLCE	Q15113	449 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	PEA15	Q15121	130 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	ZNF79	Q15937	498 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	FAM74A1	Q5RGS3	127 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	MRPS24	Q96EL2	167 aa	Known RBP	12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	SF3B5	Q9BWJ5	86 aa	Known RBP	12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	NTM	Q9P121	344 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997		V9GYH0	126 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	OR5H14	A6NHG9	310 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	SNAPIN	O95295	136 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	COX6A1	P12074	109 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	MPG	P29372	298 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	GABRA4	P48169	554 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	GSK3A	P49840	483 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	FBXW9	Q5XUX1	488 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	TMED6	Q8WW62	240 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	WDR13	Q9H1Z4	485 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	SLC26A1	Q9H2B4	701 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	GHRL	Q9UBU3	117 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	SERPINE3	A8MV23	424 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	AQP7	O14520	342 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	SOCS1	O15524	211 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	SSSCA1	O60232	199 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	TMUB2	Q71RG4	321 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	C17orf78	Q8N4C9	275 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	ARHGEF39	Q8N4T4	335 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	APCDD1L	Q8NCL9	501 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	MRGPRD	Q8TDS7	321 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	SNRNP40	Q96DI7	357 aa	Known RBP	12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	OR2J1	Q9GZK6	312 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	CTAG2	O75638	210 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	RFPL3S	P0C7P2	107 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	ALDH3B1	P43353	468 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	GGTLC2	Q14390	218 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	HFE	Q30201	348 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	CDC20B	Q86Y33	519 aa		12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997	WDR89	Q96FK6	387 aa	Predicted RBP	12.55	□□□□□ -0.4
NEDD4L-238	ENST00000635997		M0R1X1	148 aa		12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	HIST1H1D	P16402	221 aa	Known RBP	12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	AADAC	P22760	399 aa		12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	COX7A1	P24310	79 aa		12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	PTBP1	P26599	531 aa	Known RBP eCLIP	12.54	□□□□□ -0.4	8e-7	■■■■■ 28.2
NEDD4L-238	ENST00000635997	LYG1	Q8N1E2	194 aa		12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	RAB1C	Q92928	201 aa		12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	PCDHGA9	Q9Y5G4	932 aa	Known RBP	12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	TRGV10	A0A0A0MS01	117 aa		12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	NDUFB3	O43676	98 aa		12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	PRB1	P04280	392 aa		12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	CTSS	P25774	331 aa		12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	ZNF92	Q03936	586 aa		12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	BHLHA15	Q7RTS1	189 aa	Predicted RBP	12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	LINC00518	Q8N0U6	118 aa		12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	SFT2D1	Q8WV19	159 aa		12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	CXorf58	Q96LI9	332 aa		12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	TMEM38B	Q9NVV0	291 aa		12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	SSUH2	Q9Y2M2	353 aa		12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	ADAM20	O43506	726 aa		12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	CST7	O76096	145 aa		12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	ASAH2B	P0C7U1	165 aa		12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	CXCL3	P19876	107 aa		12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	MEOX2	P50222	304 aa		12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	TNFSF10	P50591	281 aa		12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	LSM6	P62312	80 aa	Known RBP	12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	FAM209B	Q5JX69	171 aa		12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	ZNF626	Q68DY1	528 aa		12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	ZNF770	Q6IQ21	691 aa	Predicted RBP	12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	LAIR2	Q6ISS4	152 aa		12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	H3F3C	Q6NXT2	135 aa		12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	SLC36A1	Q7Z2H8	476 aa		12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	MDP1	Q86V88	176 aa		12.54	□□□□□ -0.4
NEDD4L-238	ENST00000635997	SLC25A40	Q8TBP6	338 aa		12.54	□□□□□ -0.4

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