RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-238ENST00000635997 FRZBQ92765 325 aa12.57□□□□□ -0.4
NEDD4L-238ENST00000635997 CTHRC1Q96CG8 243 aa12.57□□□□□ -0.4
NEDD4L-238ENST00000635997 FOXJ3Q9UPW0 622 aa12.57□□□□□ -0.4
NEDD4L-238ENST00000635997 ZNF646O15015 1829 aaPredicted RBP12.56□□□□□ -0.4
NEDD4L-238ENST00000635997 PTP4A3O75365 173 aa12.56□□□□□ -0.4
NEDD4L-238ENST00000635997 S100PP25815 95 aa12.56□□□□□ -0.4
NEDD4L-238ENST00000635997 IL3RAP26951 378 aa12.56□□□□□ -0.4
NEDD4L-238ENST00000635997 IRF3Q14653 427 aa12.56□□□□□ -0.4
NEDD4L-238ENST00000635997 GLRX5Q86SX6 157 aa12.56□□□□□ -0.4
NEDD4L-238ENST00000635997 SLC26A10Q8NG04 563 aa12.56□□□□□ -0.4
NEDD4L-238ENST00000635997 CHD5Q8TDI0 1954 aa12.56□□□□□ -0.4
NEDD4L-238ENST00000635997 PLA2G10O15496 165 aa12.56□□□□□ -0.4
NEDD4L-238ENST00000635997 FABP1P07148 127 aa12.56□□□□□ -0.4
NEDD4L-238ENST00000635997 SLC16A13Q7RTY0 426 aa12.56□□□□□ -0.4
NEDD4L-238ENST00000635997 GALMQ96C23 342 aa12.56□□□□□ -0.4
NEDD4L-238ENST00000635997 SLC39A9Q9NUM3 307 aa12.56□□□□□ -0.4
NEDD4L-238ENST00000635997 PUS1Q9Y606 427 aaKnown RBP eCLIP12.56□□□□□ -0.4
NEDD4L-238ENST00000635997 A0A1W2PPH5 198 aa12.56□□□□□ -0.4
NEDD4L-238ENST00000635997 LINC00862A6NCI5 91 aa12.56□□□□□ -0.4
NEDD4L-238ENST00000635997 RRASP10301 218 aa12.56□□□□□ -0.4
NEDD4L-238ENST00000635997 RBMXL3Q8N7X1 1067 aaKnown RBP12.56□□□□□ -0.4
NEDD4L-238ENST00000635997 SSC4DQ8WTU2 575 aa12.56□□□□□ -0.4
NEDD4L-238ENST00000635997 A0A0D9SG52 128 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 TERTO14746 1132 aaKnown RBP12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 TBX6O95947 436 aaPredicted RBP12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 NANOS3P60323 173 aaKnown RBP12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 RPL11P62913 178 aaKnown RBP12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 PDZK1IP1Q13113 114 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 SNTB1Q13884 538 aaKnown RBP12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 PCOLCEQ15113 449 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 PEA15Q15121 130 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 ZNF79Q15937 498 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 FAM74A1Q5RGS3 127 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 MRPS24Q96EL2 167 aaKnown RBP12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 SF3B5Q9BWJ5 86 aaKnown RBP12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 NTMQ9P121 344 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 V9GYH0 126 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 OR5H14A6NHG9 310 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 SNAPINO95295 136 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 COX6A1P12074 109 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 MPGP29372 298 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 GABRA4P48169 554 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 GSK3AP49840 483 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 FBXW9Q5XUX1 488 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 TMED6Q8WW62 240 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 WDR13Q9H1Z4 485 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 SLC26A1Q9H2B4 701 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 GHRLQ9UBU3 117 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 SERPINE3A8MV23 424 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 AQP7O14520 342 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 SOCS1O15524 211 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 SSSCA1O60232 199 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 TMUB2Q71RG4 321 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 C17orf78Q8N4C9 275 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 ARHGEF39Q8N4T4 335 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 APCDD1LQ8NCL9 501 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 MRGPRDQ8TDS7 321 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 SNRNP40Q96DI7 357 aaKnown RBP12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 OR2J1Q9GZK6 312 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 CTAG2O75638 210 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 RFPL3SP0C7P2 107 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 ALDH3B1P43353 468 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 GGTLC2Q14390 218 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 HFEQ30201 348 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 CDC20BQ86Y33 519 aa12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 WDR89Q96FK6 387 aaPredicted RBP12.55□□□□□ -0.4
NEDD4L-238ENST00000635997 M0R1X1 148 aa12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 HIST1H1DP16402 221 aaKnown RBP12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 AADACP22760 399 aa12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 COX7A1P24310 79 aa12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 PTBP1P26599 531 aaKnown RBP eCLIP12.54□□□□□ -0.48e-7■■■■■ 28.2
NEDD4L-238ENST00000635997 LYG1Q8N1E2 194 aa12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 RAB1CQ92928 201 aa12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 PCDHGA9Q9Y5G4 932 aaKnown RBP12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 TRGV10A0A0A0MS01 117 aa12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 NDUFB3O43676 98 aa12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 PRB1P04280 392 aa12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 CTSSP25774 331 aa12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 ZNF92Q03936 586 aa12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 BHLHA15Q7RTS1 189 aaPredicted RBP12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 LINC00518Q8N0U6 118 aa12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 SFT2D1Q8WV19 159 aa12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 CXorf58Q96LI9 332 aa12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 TMEM38BQ9NVV0 291 aa12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 SSUH2Q9Y2M2 353 aa12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 ADAM20O43506 726 aa12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 CST7O76096 145 aa12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 ASAH2BP0C7U1 165 aa12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 CXCL3P19876 107 aa12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 MEOX2P50222 304 aa12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 TNFSF10P50591 281 aa12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 LSM6P62312 80 aaKnown RBP12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 FAM209BQ5JX69 171 aa12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 ZNF626Q68DY1 528 aa12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 ZNF770Q6IQ21 691 aaPredicted RBP12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 LAIR2Q6ISS4 152 aa12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 H3F3CQ6NXT2 135 aa12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 SLC36A1Q7Z2H8 476 aa12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 MDP1Q86V88 176 aa12.54□□□□□ -0.4
NEDD4L-238ENST00000635997 SLC25A40Q8TBP6 338 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms