RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 GGTLC2Q14390 218 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 TMEM241Q24JQ0 296 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 TMEM128Q5BJH2 165 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 GUSBP11Q6P575 273 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 ZNF841Q6ZN19 808 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 C16orf82Q7Z2V1 217 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 ANKRD33Q7Z3H0 272 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 OR2W3Q7Z3T1 314 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 RBM45Q8IUH3 476 aaKnown RBP4.96□□□□□ -1.62
SCN1A-209ENST00000635750 ISL2Q96A47 359 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 NTNG2Q96CW9 530 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 ERRFI1Q9UJM3 462 aaPredicted RBP4.96□□□□□ -1.62
SCN1A-209ENST00000635750 POMT2Q9UKY4 750 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 CHST2Q9Y4C5 530 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 EPHA8P29322 1005 aaPredicted RBP4.96□□□□□ -1.62
SCN1A-209ENST00000635750 METAP1P53582 386 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 UBE2L3P68036 154 aaKnown RBP4.96□□□□□ -1.62
SCN1A-209ENST00000635750 FOXO1Q12778 655 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 INPP5JQ15735 1006 aaPredicted RBP4.96□□□□□ -1.62
SCN1A-209ENST00000635750 SMN1Q16637 294 aaKnown RBP4.96□□□□□ -1.62
SCN1A-209ENST00000635750 SMUG1Q53HV7 270 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 PAQR6Q6TCH4 344 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 NKAIN4Q8IVV8 208 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 ZNF784Q8NCA9 323 aaPredicted RBP4.96□□□□□ -1.62
SCN1A-209ENST00000635750 LKAAEAR1Q8TD35 194 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 AQP10Q96PS8 301 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 NIPSNAP1Q9BPW8 284 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 UQCC2Q9BRT2 126 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 ABHD14AQ9BUJ0 271 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 C11orf54Q9H0W9 315 aaPredicted RBP4.96□□□□□ -1.62
SCN1A-209ENST00000635750 PIPOXQ9P0Z9 390 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 A0A087WUJ7 227 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 A0A1W2PNV4 684 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 A6NDN8 102 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 TMEM262E9PQX1 116 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 CORTO00230 105 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 SPINK4O60575 86 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 GFERP55789 205 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 RFLNAQ6ZTI6 216 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 LINC00469Q8N7U9 141 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 TMEM229BQ8NBD8 167 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 OR52M1Q8NGK5 317 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 OR10D3Q8NH80 312 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 GABARAPL3Q9BY60 117 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 FAM53CQ9NYF3 392 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 MMP24Q9Y5R2 645 aa4.96□□□□□ -1.62
SCN1A-209ENST00000635750 BRWD1Q9NSI6 2320 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 SNRPGP15A8MWD9 76 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 DHRS3O75911 302 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 CST7O76096 145 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 NUDT3O95989 172 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 IGHA1P01876 353 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 IGHA2P01877 340 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 SNRPNP63162 240 aaKnown RBP4.95□□□□□ -1.62
SCN1A-209ENST00000635750 PITPNC1Q9UKF7 332 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 MYOM1P52179 1685 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 A0A1B0GUL6 1792 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 OR2A25A4D2G3 310 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 C21orf140B9A014 251 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 HLA-GP17693 338 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 WNT5AP41221 380 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 EMDP50402 254 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 ELOBQ15370 118 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 ZNF66Q6ZN08 573 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 C6orf201Q7Z4U5 140 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 C2CD4CQ8TF44 421 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 FLYWCH2Q96CP2 140 aaKnown RBP4.95□□□□□ -1.62
SCN1A-209ENST00000635750 STARD4Q96DR4 205 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 IL21Q9HBE4 155 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 HCSTQ9UBK5 93 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 RAXQ9Y2V3 346 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 SF3B6Q9Y3B4 125 aaKnown RBP4.95□□□□□ -1.62
SCN1A-209ENST00000635750 OR4C46A6NHA9 309 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 SPTBP11277 2137 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 NME1P15531 152 aaKnown RBP4.95□□□□□ -1.62
SCN1A-209ENST00000635750 OR4A47Q6IF82 309 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 TOMM20LQ6UXN7 152 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 STXBP6Q8NFX7 210 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 CCL19Q99731 98 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 LRRC61Q9BV99 259 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 ZFP64Q9NPA5 681 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 TREM2Q9NZC2 230 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 LIPGQ9Y5X9 500 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 RGPD4Q7Z3J3 1758 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 C16orf97H3BN30 126 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 TBX19O60806 448 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 HAND1O96004 215 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 SKP2Q13309 424 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 STAC2Q6ZMT1 411 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 NT5CQ8TCD5 201 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 RPS4Y2Q8TD47 263 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 MRGPRDQ8TDS7 321 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 NUDCD2Q8WVJ2 157 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 TMEM191AQ9H0A3 160 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 CLEC2DQ9UHP7 191 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 ISLRO14498 428 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 DNAL4O96015 105 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 PI3P19957 117 aa4.95□□□□□ -1.62
SCN1A-209ENST00000635750 MRPS11P82912 194 aaKnown RBP4.95□□□□□ -1.62
SCN1A-209ENST00000635750 TAGLNQ01995 201 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms