RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 MAGEB3O15480 346 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 ENSAO43768 121 aaKnown RBP8.05□□□□□ -1.12
LINC00339-210ENST00000635675 SC5DO75845 299 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 LIPFP07098 398 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 PPIAL4GP0DN37 164 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 TMEM225BP0DP42 221 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 CPEP16870 476 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 SRD5A1P18405 259 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 FSTP19883 344 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 BDKRB2P30411 391 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 CEBPDP49716 269 aaPredicted RBP8.05□□□□□ -1.12
LINC00339-210ENST00000635675 CAV3P56539 151 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 RPS25P62851 125 aaKnown RBP8.05□□□□□ -1.12
LINC00339-210ENST00000635675 PPP3R1P63098 170 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 MLLT11Q13015 90 aaPredicted RBP8.05□□□□□ -1.12
LINC00339-210ENST00000635675 INSL4Q14641 139 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 SSX1Q16384 188 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 ACSM3Q53FZ2 586 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 BTNL3Q6UXE8 466 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 ASCL4Q6XD76 172 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 C1QL2Q7Z5L3 287 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 FAM58AQ8N1B3 248 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 ZNF561Q8N587 486 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 TEX29Q8N6K0 151 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 LY6G5BQ8NDX9 201 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 THRSPQ92748 146 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 UFD1Q92890 307 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 ISOC1Q96CN7 298 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 CPNE2Q96FN4 548 aaPredicted RBP8.05□□□□□ -1.12
LINC00339-210ENST00000635675 DMRTB1Q96MA1 342 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 TMED9Q9BVK6 235 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 RBM38Q9H0Z9 239 aaKnown RBP8.05□□□□□ -1.12
LINC00339-210ENST00000635675 OR51E2Q9H255 320 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 RHOFQ9HBH0 211 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 HMG20AQ9NP66 347 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 NOX4Q9NPH5 578 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 CKLFQ9UBR5 152 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 SLC25A10Q9UBX3 287 aaPredicted RBP8.05□□□□□ -1.12
LINC00339-210ENST00000635675 RSL24D1Q9UHA3 163 aaKnown RBP8.05□□□□□ -1.12
LINC00339-210ENST00000635675 RPUSD1Q9UJJ7 312 aaKnown RBP8.05□□□□□ -1.12
LINC00339-210ENST00000635675 FOXJ3Q9UPW0 622 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 AUP1Q9Y679 476 aa8.05□□□□□ -1.12
LINC00339-210ENST00000635675 GABRPO00591 440 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 ZNF737O75373 536 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 FSHBP01225 129 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 SFTPBP07988 381 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 CHRM2P08172 466 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 ADRA2CP18825 462 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 MAPK3P27361 379 aaPredicted RBP8.04□□□□□ -1.12
LINC00339-210ENST00000635675 SRP14P37108 136 aaKnown RBP8.04□□□□□ -1.12
LINC00339-210ENST00000635675 PTGFRP43088 359 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 ZNF146Q15072 292 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 CNPY1Q3B7I2 92 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 DDI2Q5TDH0 399 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 ELP2Q6IA86 826 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 PRIMA1Q86XR5 153 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 LYPD6Q86Y78 171 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 PHC2Q8IXK0 858 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 PNLDC1Q8NA58 520 aaKnown RBP8.04□□□□□ -1.12
LINC00339-210ENST00000635675 Q8NFD4 153 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 PXT1Q8NFP0 134 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 C8orf46Q8TAG6 207 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 NANPQ8TBE9 248 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 EMG1Q92979 244 aaKnown RBP8.04□□□□□ -1.12
LINC00339-210ENST00000635675 TMEM203Q969S6 136 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 GPER1Q99527 375 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 NKX3-1Q99801 234 aaPredicted RBP8.04□□□□□ -1.12
LINC00339-210ENST00000635675 CHCHD6Q9BRQ6 235 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 DCTN5Q9BTE1 182 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 MRI1Q9BV20 369 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 FAM192AQ9GZU8 254 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 CNTD2Q9H8S5 307 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 IL36RNQ9UBH0 155 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 OR14J1Q9UGF5 321 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 SF3B6Q9Y3B4 125 aaKnown RBP8.04□□□□□ -1.12
LINC00339-210ENST00000635675 SVEP1Q4LDE5 3571 aa8.04□□□□□ -1.12
LINC00339-210ENST00000635675 K7N7A8 449 aa8.03□□□□□ -1.12
LINC00339-210ENST00000635675 CCRL2O00421 344 aa8.03□□□□□ -1.12
LINC00339-210ENST00000635675 TK1P04183 234 aa8.03□□□□□ -1.12
LINC00339-210ENST00000635675 CALCBP10092 127 aa8.03□□□□□ -1.12
LINC00339-210ENST00000635675 NDUFB7P17568 137 aa8.03□□□□□ -1.12
LINC00339-210ENST00000635675 PRKACAP17612 351 aa8.03□□□□□ -1.12
LINC00339-210ENST00000635675 DUSP1P28562 367 aa8.03□□□□□ -1.12
LINC00339-210ENST00000635675 ZNF93P35789 620 aaPredicted RBP8.03□□□□□ -1.12
LINC00339-210ENST00000635675 OR3A4PP47883 348 aa8.03□□□□□ -1.12
LINC00339-210ENST00000635675 FGF12P61328 243 aa8.03□□□□□ -1.12
LINC00339-210ENST00000635675 VBP1P61758 197 aa8.03□□□□□ -1.12
LINC00339-210ENST00000635675 NCS1P62166 190 aa8.03□□□□□ -1.12
LINC00339-210ENST00000635675 COL10A1Q03692 680 aa8.03□□□□□ -1.12
LINC00339-210ENST00000635675 TRAM1Q15629 374 aa8.03□□□□□ -1.12
LINC00339-210ENST00000635675 KLF17Q5JT82 389 aaPredicted RBP8.03□□□□□ -1.12
LINC00339-210ENST00000635675 SPIN3Q5JUX0 258 aa8.03□□□□□ -1.12
LINC00339-210ENST00000635675 FAM27D1Q5T7N8 215 aa8.03□□□□□ -1.12
LINC00339-210ENST00000635675 TMEM91Q6ZNR0 172 aa8.03□□□□□ -1.12
LINC00339-210ENST00000635675 SLC16A12Q6ZSM3 486 aa8.03□□□□□ -1.12
LINC00339-210ENST00000635675 CEACAM19Q7Z692 300 aa8.03□□□□□ -1.12
LINC00339-210ENST00000635675 CDH26Q8IXH8 852 aa8.03□□□□□ -1.12
LINC00339-210ENST00000635675 TMEM185AQ8NFB2 350 aa8.03□□□□□ -1.12
LINC00339-210ENST00000635675 TNFAIP8L1Q8WVP5 186 aa8.03□□□□□ -1.12
LINC00339-210ENST00000635675 UPRTQ96BW1 309 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms