RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 FBXL22Q6P050 247 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 TBPL2Q6SJ96 375 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 SCIMPQ6UWF3 145 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 C12orf54Q6X4T0 127 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 ADAMTSL5Q6ZMM2 481 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 TMPPEQ6ZT21 453 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 RASSF6Q6ZTQ3 369 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 IFNEQ86WN2 208 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 PIANPQ8IYJ0 282 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 GAPTQ8N292 157 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 METTL27Q8N6F8 245 aaPredicted RBP2.39□□□□□ -2.03
PSPC1-208ENST00000635562 MAPKAPK5-AS1Q8N8E1 139 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 OR10G4Q8NGN3 311 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 OR13A1Q8NGR1 328 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 GPR119Q8TDV5 335 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 SLC37A2Q8TED4 501 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 GALMQ96C23 342 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 RPUSD4Q96CM3 377 aaKnown RBP2.39□□□□□ -2.03
PSPC1-208ENST00000635562 LRRC58Q96CX6 371 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 NARS2Q96I59 477 aaKnown RBP2.39□□□□□ -2.03
PSPC1-208ENST00000635562 OR7D2Q96RA2 312 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 TBX15Q96SF7 602 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 FAM173AQ9BQD7 235 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 C20orf144Q9BQM9 153 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 C1orf50Q9BV19 199 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 RSPO3Q9BXY4 272 aaPredicted RBP2.39□□□□□ -2.03
PSPC1-208ENST00000635562 MAP1LC3BQ9GZQ8 125 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 FBXL15Q9H469 300 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 VSIRQ9H7M9 311 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 ZNF442Q9H7R0 627 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 Q9HAA7 133 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 ADGRL4Q9HBW9 690 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 KCNJ16Q9NPI9 418 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 RBM22Q9NW64 420 aaKnown RBP eCLIP2.39□□□□□ -2.03
PSPC1-208ENST00000635562 SPANXCQ9NY87 97 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 CALML5Q9NZT1 146 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 DHCR7Q9UBM7 475 aaKnown RBP2.39□□□□□ -2.03
PSPC1-208ENST00000635562 GNPTGQ9UJJ9 305 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 GNG8Q9UK08 70 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 PYCARDQ9ULZ3 195 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 L3MBTL1Q9Y468 752 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 RBM7Q9Y580 266 aaKnown RBP2.39□□□□□ -2.03
PSPC1-208ENST00000635562 WSB1Q9Y6I7 421 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 TNS3Q68CZ2 1445 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 TP53BP1Q12888 1972 aaPredicted RBP2.39□□□□□ -2.03
PSPC1-208ENST00000635562 ASTN1O14525 1302 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 IGSF9BQ9UPX0 1349 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 BCL9LQ86UU0 1499 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 MYO15BQ96JP2 1530 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 CHD2O14647 1828 aaKnown RBP2.38□□□□□ -2.03
PSPC1-208ENST00000635562 MYH11P35749 1972 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 A0A087WZ39 114 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 OR5H15A6NDH6 313 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 A6NDN8 102 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 MRASO14807 208 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 HMGB3O15347 200 aaKnown RBP2.38□□□□□ -2.03
PSPC1-208ENST00000635562 FKBP6O75344 327 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 FRAT2O75474 233 aaPredicted RBP2.38□□□□□ -2.03
PSPC1-208ENST00000635562 EDN1P05305 212 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 C8GP07360 202 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 MRPL3P09001 348 aaKnown RBP2.38□□□□□ -2.03
PSPC1-208ENST00000635562 FRMD6-AS1P0C7T7 363 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 MPC1LP0DKB6 136 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 IGHV4-38-2P0DP08 117 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 HSD17B1P14061 328 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 CD99P14209 185 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 SOX3P41225 446 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 ELK3P41970 407 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 FABP6P51161 128 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 PIGPP57054 158 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 MAXP61244 160 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 PKIAP61925 76 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 BTG1P62324 171 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 SLC25A11Q02978 314 aaKnown RBP2.38□□□□□ -2.03
PSPC1-208ENST00000635562 ZNF85Q03923 595 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 BAXQ07812 192 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 SMAGPQ0VAQ4 97 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 FASTKQ14296 549 aaKnown RBP2.38□□□□□ -2.03
PSPC1-208ENST00000635562 CLINT1Q14677 625 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 ZNF726P1Q15940 193 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 MICAQ29983 383 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 ZNF718Q3SXZ3 478 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 CDNFQ49AH0 187 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 WDR38Q5JTN6 314 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 SPANXN4Q5MJ08 99 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 CLEC12AQ5QGZ9 265 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 C1orf194Q5T5A4 169 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 TPTE2P1Q5T6R2 138 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 LAMTOR1Q6IAA8 161 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 DCUN1D2Q6PH85 259 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 C19orf48Q6RUI8 117 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 Q6ZVQ6 151 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 FA2HQ7L5A8 372 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 PRSS48Q7RTY5 328 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 DENND4AQ7Z401 1863 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 C6orf120Q7Z4R8 191 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 KLHDC8BQ8IXV7 354 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 ZNF567Q8N184 647 aa2.38□□□□□ -2.03
PSPC1-208ENST00000635562 UMODL1-AS1Q8N2C9 162 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms