RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 HIST1H1DP16402 221 aaKnown RBP10.44□□□□□ -0.74
SHPRH-211ENST00000629427 PRSS12P56730 875 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 FOXO1Q12778 655 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 TUSC5Q8IXB3 177 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 ZNF683Q8IZ20 524 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 ARRDC1Q8N5I2 433 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 PRSS3P2Q8NHM4 247 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 YIPF6Q96EC8 236 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 IL20Q9NYY1 176 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 ZMIZ1Q9ULJ6 1067 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 PAPPAQ13219 1627 aa10.43□□□□□ -0.74
SHPRH-211ENST00000629427 ATXN7O15265 892 aaPredicted RBP10.43□□□□□ -0.74
SHPRH-211ENST00000629427 OR2W3Q7Z3T1 314 aa10.43□□□□□ -0.74
SHPRH-211ENST00000629427 OR4A4PQ8NGN8 299 aa10.43□□□□□ -0.74
SHPRH-211ENST00000629427 ABHD14AQ9BUJ0 271 aa10.43□□□□□ -0.74
SHPRH-211ENST00000629427 APELAP0DMC3 54 aa10.43□□□□□ -0.74
SHPRH-211ENST00000629427 ZNF429Q86V71 674 aa10.43□□□□□ -0.74
SHPRH-211ENST00000629427 PTPMT1Q8WUK0 201 aaPredicted RBP10.43□□□□□ -0.74
SHPRH-211ENST00000629427 RNASEK-C17orf49H0YIS7 233 aa10.43□□□□□ -0.74
SHPRH-211ENST00000629427 IGHA1P01876 353 aa10.43□□□□□ -0.74
SHPRH-211ENST00000629427 IGHA2P01877 340 aa10.43□□□□□ -0.74
SHPRH-211ENST00000629427 OR3A1P47881 315 aa10.43□□□□□ -0.74
SHPRH-211ENST00000629427 KLHDC1Q8N7A1 406 aa10.43□□□□□ -0.74
SHPRH-211ENST00000629427 TSPAN32Q96QS1 320 aa10.43□□□□□ -0.74
SHPRH-211ENST00000629427 CACNG5Q9UF02 275 aa10.43□□□□□ -0.74
SHPRH-211ENST00000629427 J3QR89 54 aa10.43□□□□□ -0.74
SHPRH-211ENST00000629427 CISD3P0C7P0 127 aa10.43□□□□□ -0.74
SHPRH-211ENST00000629427 FABP4P15090 132 aa10.43□□□□□ -0.74
SHPRH-211ENST00000629427 ETV3LQ6ZN32 361 aa10.43□□□□□ -0.74
SHPRH-211ENST00000629427 GLRX2Q9NS18 164 aa10.43□□□□□ -0.74
SHPRH-211ENST00000629427 CCL21O00585 134 aa10.43□□□□□ -0.74
SHPRH-211ENST00000629427 TMUB1Q9BVT8 246 aa10.43□□□□□ -0.74
SHPRH-211ENST00000629427 ZNF831Q5JPB2 1677 aa10.43□□□□□ -0.74
SHPRH-211ENST00000629427 LANCL1O43813 399 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 NXPH1P58417 271 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 NKG7Q16617 165 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 ZDHHC22Q8N966 263 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 OR5C1Q8NGR4 320 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 RHOFQ9HBH0 211 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 HOXC4P09017 264 aaPredicted RBP10.42□□□□□ -0.74
SHPRH-211ENST00000629427 OR5AL1P0C617 328 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 OR5AC1P0C628 307 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 HTR1DP28221 377 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 ATP5SQ99766 215 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 SH2D2AQ9NP31 389 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 RASL12Q9NYN1 266 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 PLXNA1Q9UIW2 1896 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 ADAMTSL1Q8N6G6 1762 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 RAB40CQ96S21 281 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 CNTD2Q9H8S5 307 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 ABCA3Q99758 1704 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 KCNE1BA0A087WTH5 132 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 YBX1P67809 324 aaKnown RBP10.42□□□□□ -0.74
SHPRH-211ENST00000629427 SKP2Q13309 424 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 ASCL5Q7RTU5 278 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 OR4D10Q8NGI6 311 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 OR1L1Q8NH94 360 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 RHNO1Q9BSD3 238 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 CYSLTR2Q9NS75 346 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 NAT8BQ9UHF3 227 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 INSIG2Q9Y5U4 225 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 APC2O95996 2303 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 ANKRD36A6QL64 1941 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 A0A1W2PNV4 684 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 DNPH1O43598 174 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 ZNF737O75373 536 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 ACTL6AO96019 429 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 RPL30P62888 115 aaKnown RBP10.42□□□□□ -0.74
SHPRH-211ENST00000629427 FDX2Q6P4F2 183 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 WDR74Q6RFH5 385 aaPredicted RBP10.42□□□□□ -0.74
SHPRH-211ENST00000629427 WFDC3Q8IUB2 231 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 ZNF596Q8TC21 504 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 SMIM4Q8WVI0 70 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 DUSP21Q9H596 190 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 SLC45A2Q9UMX9 530 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 TEX50A0A1B0GTY4 177 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 OOEPA6NGQ2 149 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 RAC3P60763 192 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 ZNF441Q8N8Z8 693 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 ASB10Q8WXI3 467 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 ASB13Q8WXK3 278 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 VAMP8Q9BV40 100 aa10.42□□□□□ -0.74
SHPRH-211ENST00000629427 OR5B21A6NL26 309 aa10.41□□□□□ -0.74
SHPRH-211ENST00000629427 CT62P0C5K7 136 aa10.41□□□□□ -0.74
SHPRH-211ENST00000629427 CCL4P13236 92 aa10.41□□□□□ -0.74
SHPRH-211ENST00000629427 FAM109BQ6ICB4 259 aaPredicted RBP10.41□□□□□ -0.74
SHPRH-211ENST00000629427 FAM60AQ9NP50 221 aa10.41□□□□□ -0.74
SHPRH-211ENST00000629427 GNG7O60262 68 aa10.41□□□□□ -0.74
SHPRH-211ENST00000629427 CDKN2AP42771 156 aaKnown RBP10.41□□□□□ -0.74
SHPRH-211ENST00000629427 OR2M3Q8NG83 312 aa10.41□□□□□ -0.74
SHPRH-211ENST00000629427 TGOLN2O43493 480 aa10.41□□□□□ -0.74
SHPRH-211ENST00000629427 SEMA7AO75326 666 aa10.41□□□□□ -0.74
SHPRH-211ENST00000629427 VWA1Q6PCB0 445 aa10.41□□□□□ -0.74
SHPRH-211ENST00000629427 MOGAT3Q86VF5 341 aa10.41□□□□□ -0.74
SHPRH-211ENST00000629427 PDPNQ86YL7 162 aa10.41□□□□□ -0.74
SHPRH-211ENST00000629427 OR4S2Q8NH73 311 aa10.41□□□□□ -0.74
SHPRH-211ENST00000629427 LINC00052Q96N35 136 aa10.41□□□□□ -0.74
SHPRH-211ENST00000629427 SLC6A13Q9NSD5 602 aa10.41□□□□□ -0.74
SHPRH-211ENST00000629427 RNF224P0DH78 156 aa10.41□□□□□ -0.74
SHPRH-211ENST00000629427 SFTPCP11686 197 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms