RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 CLLU1Q5K131 121 aa11.32□□□□□ -0.6
SCN8A-209ENST00000627620 FNDC7Q5VTL7 733 aa11.32□□□□□ -0.6
SCN8A-209ENST00000627620 DHRS7BQ6IAN0 325 aaPredicted RBP11.32□□□□□ -0.6
SCN8A-209ENST00000627620 LYPD8Q6UX82 237 aa11.32□□□□□ -0.6
SCN8A-209ENST00000627620 MPC2O95563 127 aa11.32□□□□□ -0.6
SCN8A-209ENST00000627620 SELENOPP49908 381 aa11.32□□□□□ -0.6
SCN8A-209ENST00000627620 HLXQ14774 488 aaPredicted RBP11.32□□□□□ -0.6
SCN8A-209ENST00000627620 OR4D11Q8NGI4 311 aa11.32□□□□□ -0.6
SCN8A-209ENST00000627620 RAB1CQ92928 201 aa11.32□□□□□ -0.6
SCN8A-209ENST00000627620 HSD17B10Q99714 261 aaKnown RBP11.32□□□□□ -0.6
SCN8A-209ENST00000627620 ANKRD20A5PA0PJZ0 165 aa11.32□□□□□ -0.6
SCN8A-209ENST00000627620 MAP1LC3B2A6NCE7 125 aa11.32□□□□□ -0.6
SCN8A-209ENST00000627620 C5orf67F2Z3F1 127 aa11.32□□□□□ -0.6
SCN8A-209ENST00000627620 CYR61O00622 381 aa11.32□□□□□ -0.6
SCN8A-209ENST00000627620 HSBP1O75506 76 aa11.32□□□□□ -0.6
SCN8A-209ENST00000627620 CEACAM3P40198 252 aa11.32□□□□□ -0.6
SCN8A-209ENST00000627620 LSM6P62312 80 aaKnown RBP11.32□□□□□ -0.6
SCN8A-209ENST00000627620 BTNL3Q6UXE8 466 aa11.32□□□□□ -0.6
SCN8A-209ENST00000627620 FA2HQ7L5A8 372 aa11.32□□□□□ -0.6
SCN8A-209ENST00000627620 OR2C3Q8N628 320 aa11.32□□□□□ -0.6
SCN8A-209ENST00000627620 MAP1LC3BQ9GZQ8 125 aa11.32□□□□□ -0.6
SCN8A-209ENST00000627620 MMP26Q9NRE1 261 aa11.32□□□□□ -0.6
SCN8A-209ENST00000627620 WSB1Q9Y6I7 421 aa11.32□□□□□ -0.6
SCN8A-209ENST00000627620 NTN1O95631 604 aa11.32□□□□□ -0.6
SCN8A-209ENST00000627620 C11orf91Q3C1V1 193 aa11.32□□□□□ -0.6
SCN8A-209ENST00000627620 WDR13Q9H1Z4 485 aa11.32□□□□□ -0.6
SCN8A-209ENST00000627620 TRAPPC1Q9Y5R8 145 aa11.32□□□□□ -0.6
SCN8A-209ENST00000627620 IGHV5-10-1A0A0J9YXX1 117 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 LANCL1O43813 399 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 GAB4Q2WGN9 574 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 MYPOPQ86VE0 399 aaPredicted RBP11.31□□□□□ -0.6
SCN8A-209ENST00000627620 OR1L4Q8NGR5 311 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 OR10AC1Q8NH08 325 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 PTPMT1Q8WUK0 201 aaPredicted RBP11.31□□□□□ -0.6
SCN8A-209ENST00000627620 PTP4A1Q93096 173 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 FFAR1O14842 300 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 ACTL6AO96019 429 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 PTTG1IPP53801 180 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 IL13RA2Q14627 380 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 LSMEM1Q8N8F7 131 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 BLNKQ8WV28 456 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 ABHD1Q96SE0 405 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 TRAV38-1A0A0B4J264 116 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 PRSS44E7EML9 344 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 TCAPO15273 167 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 TPPP2P59282 170 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 APOBEC4Q8WW27 367 aaKnown RBP11.31□□□□□ -0.6
SCN8A-209ENST00000627620 GPR27Q9NS67 375 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 FRRS1LQ9P0K9 344 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 OR1A1Q9P1Q5 309 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 A0A1W2PPV9 198 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 C21orf140B9A014 251 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 CST2P09228 141 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 THYN1Q9P016 225 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 TMPRSS2O15393 492 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 PNPP00491 289 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 CCL3P10147 92 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 CSF2RBP32927 897 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 FOXO1Q12778 655 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 MAP6Q96JE9 813 aa11.31□□□□□ -0.6
SCN8A-209ENST00000627620 NOL4LQ96MY1 436 aaPredicted RBP11.31□□□□□ -0.6
SCN8A-209ENST00000627620 A0A1W2PRD5 423 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 A0A1W2PRF3 423 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 A0A1W2PRM7 423 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 OGG1O15527 345 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 ANKRD34CP0C6C1 535 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 RPS4XP62701 263 aaKnown RBP11.3□□□□□ -0.6
SCN8A-209ENST00000627620 PRSS54Q6PEW0 395 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 BCORQ6W2J9 1755 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 DOK5Q9P104 306 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 MED19A0JLT2 244 aaPredicted RBP11.3□□□□□ -0.6
SCN8A-209ENST00000627620 GYPAP02724 150 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 MRPS11P82912 194 aaKnown RBP11.3□□□□□ -0.6
SCN8A-209ENST00000627620 SIGLEC14Q08ET2 396 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 SPNS3Q6ZMD2 512 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 LIAT1Q6ZQX7 453 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 ZAR1Q86SH2 424 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 FAM157AC9JC47 383 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 RHOBP62745 196 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 TREM2Q9NZC2 230 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 STRCQ7RTU9 1775 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 ARAP2Q8WZ64 1704 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 RD3LP0DJH9 198 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 PMCHP20382 165 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 SRP14P37108 136 aaKnown RBP11.3□□□□□ -0.6
SCN8A-209ENST00000627620 CDC34P49427 236 aaPredicted RBP11.3□□□□□ -0.6
SCN8A-209ENST00000627620 GNG4P50150 75 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 TNXAQ16473 311 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 ZNF260Q3ZCT1 412 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 SLC52A3Q9NQ40 469 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 PATE3B3GLJ2 98 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 TRDCB7Z8K6 153 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 ZNF737O75373 536 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 AGFG2O95081 481 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 OR4A8P0C604 315 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 TMEM241Q24JQ0 296 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 SMRP1Q8NCR6 262 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 OR2M7Q8NG81 312 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 OR4S2Q8NH73 311 aa11.3□□□□□ -0.6
SCN8A-209ENST00000627620 RND1Q92730 232 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms