RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 OR4M1Q8NGD0 313 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 ITPKCQ96DU7 683 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 BORCS8Q96FH0 119 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 CEP19Q96LK0 163 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 TECTBQ96PL2 329 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 GPER1Q99527 375 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 MRI1Q9BV20 369 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 TMEM165Q9HC07 324 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 MRPL15Q9P015 296 aaKnown RBP10.57□□□□□ -0.72
PNKP-217ENST00000625216 MIOXQ9UGB7 285 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 MPC1Q9Y5U8 109 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 ETV7Q9Y603 341 aa10.57□□□□□ -0.72
PNKP-217ENST00000625216 LOC105371242A0A075B767 164 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 FAM25AB3EWG3 89 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 FAM25CB3EWG5 89 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 FAM25GB3EWG6 89 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 BPNT1O95861 308 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 EPHA1P21709 976 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 CA6P23280 308 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 FUT6P51993 359 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 SCAND1P57086 179 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 MZT1Q08AG7 82 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 MAB21L1Q13394 359 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 UNC119Q13432 240 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 ZNF846Q147U1 533 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 ZNF79Q15937 498 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 CEACAM21Q3KPI0 293 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 C2orf76Q3KRA6 126 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 UBE2NLQ5JXB2 153 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 AWAT2Q6E213 333 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 OR10K2Q6IF99 312 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 MOGAT3Q86VF5 341 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 FTMTQ8N4E7 242 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 OR11L1Q8NGX0 322 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 Q8TCH9 128 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 TNFAIP8L1Q8WVP5 186 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 S100ZQ8WXG8 99 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 OR5P3Q8WZ94 311 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 DIRAS2Q96HU8 199 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 JMJD8Q96S16 334 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 ADAT1Q9BUB4 502 aaKnown RBP10.56□□□□□ -0.72
PNKP-217ENST00000625216 WDR12Q9GZL7 423 aaKnown RBP10.56□□□□□ -0.72
PNKP-217ENST00000625216 HMG20AQ9NP66 347 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 RHBDL2Q9NX52 303 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 EXTL2Q9UBQ6 330 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 OPN4Q9UHM6 478 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 ADAM30Q9UKF2 790 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 SLC7A11Q9UPY5 501 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 PPIAL4AQ9Y536 164 aa10.56□□□□□ -0.72
PNKP-217ENST00000625216 CEACAM18A8MTB9 384 aa10.55□□□□□ -0.72
PNKP-217ENST00000625216 TMEM14DPA8MWL7 114 aa10.55□□□□□ -0.72
PNKP-217ENST00000625216 PTBP3O95758 552 aaKnown RBP10.55□□□□□ -0.72
PNKP-217ENST00000625216 CYB5R3P00387 301 aaPredicted RBP10.55□□□□□ -0.72
PNKP-217ENST00000625216 APOA1P02647 267 aa10.55□□□□□ -0.72
PNKP-217ENST00000625216 VSIG8P0DPA2 414 aa10.55□□□□□ -0.72
PNKP-217ENST00000625216 ARSBP15848 533 aa10.55□□□□□ -0.72
PNKP-217ENST00000625216 FPR2P25090 351 aa10.55□□□□□ -0.72
PNKP-217ENST00000625216 PMELP40967 661 aa10.55□□□□□ -0.72
PNKP-217ENST00000625216 RBP2P50120 134 aa10.55□□□□□ -0.72
PNKP-217ENST00000625216 GPM6AP51674 278 aa10.55□□□□□ -0.72
PNKP-217ENST00000625216 MTCP1P56278 107 aa10.55□□□□□ -0.72
PNKP-217ENST00000625216 QRFPP83859 136 aa10.55□□□□□ -0.72
PNKP-217ENST00000625216 SRSF2Q01130 221 aaKnown RBP10.55□□□□□ -0.72
PNKP-217ENST00000625216 OR8G1Q15617 311 aa10.55□□□□□ -0.72
PNKP-217ENST00000625216 GLIPR1L1Q6UWM5 242 aa10.55□□□□□ -0.72
PNKP-217ENST00000625216 WDR86Q86TI4 376 aa10.55□□□□□ -0.72
PNKP-217ENST00000625216 ANGPTL5Q86XS5 388 aa10.55□□□□□ -0.72
PNKP-217ENST00000625216 CMTM4Q8IZR5 234 aa10.55□□□□□ -0.72
PNKP-217ENST00000625216 DTX3Q8N9I9 347 aa10.55□□□□□ -0.72
PNKP-217ENST00000625216 SOSTQ9BQB4 213 aa10.55□□□□□ -0.72
PNKP-217ENST00000625216 SUCNR1Q9BXA5 334 aa10.55□□□□□ -0.72
PNKP-217ENST00000625216 FN3KRPQ9HA64 309 aa10.55□□□□□ -0.72
PNKP-217ENST00000625216 NEK6Q9HC98 313 aa10.55□□□□□ -0.72
PNKP-217ENST00000625216 AUP1Q9Y679 476 aa10.55□□□□□ -0.72
PNKP-217ENST00000625216 IGKV1-12A0A0C4DH73 117 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.54□□□□□ -0.72
PNKP-217ENST00000625216 A0A1W2PP11 408 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 ZNF732B4DXR9 585 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 TRAPPC2LH3BP13 241 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 SPRY1O43609 319 aaPredicted RBP10.54□□□□□ -0.72
PNKP-217ENST00000625216 ANGPTL7O43827 346 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 KDM4BO94953 1096 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 VENTXO95231 258 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 PLATP00750 562 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 FSHBP01225 129 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 IGKV1D-12P01611 117 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 CD40LGP29965 261 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 PTGFRP43088 359 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 ATP1B3P54709 279 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 HILS1P60008 231 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 ZNF45Q02386 682 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 ZNF154Q13106 437 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 KCNJ8Q15842 424 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 SPANXN2Q5MJ10 180 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 NLRC3Q7RTR2 1065 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 CALHM1Q8IU99 346 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 IZUMO1Q8IYV9 350 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 PNLDC1Q8NA58 520 aaKnown RBP10.54□□□□□ -0.72
PNKP-217ENST00000625216 DEFB108BQ8NET1 73 aa10.54□□□□□ -0.72
PNKP-217ENST00000625216 OR5A2Q8NGI9 324 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms