RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 FAAP24Q9BTP7 215 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 SLC26A1Q9H2B4 701 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 SLC25A22Q9H936 323 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 C11orf94C9JXX5 98 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 BMPR1BO00238 502 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 ZFP36L2P47974 494 aaKnown RBP7.93□□□□□ -1.14
VCL-206ENST00000623461 OR8B8Q15620 311 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 ZNF141Q15928 474 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 Q6ZNB5 142 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 TGIF2LXQ8IUE1 241 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.93□□□□□ -1.14
VCL-206ENST00000623461 RDH5Q92781 318 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 ZNF775Q96BV0 537 aaPredicted RBP7.93□□□□□ -1.14
VCL-206ENST00000623461 GALMQ96C23 342 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 RBM14Q96PK6 669 aaKnown RBP7.93□□□□□ -1.14
VCL-206ENST00000623461 HSPB8Q9UJY1 196 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 SVILO95425 2214 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 OR5AL1P0C617 328 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 PMCHL1Q16048 86 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 Q5BKY6 102 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 OR4A47Q6IF82 309 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 ZNF683Q8IZ20 524 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 C10orf111Q8N326 155 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 NPEPL1Q8NDH3 523 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 TMEM167BQ9NRX6 74 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 NKX6-3A6NJ46 265 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 OR4C45A6NMZ5 311 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 EFSO43281 561 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 OR5G3P0C626 314 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 OR3A4PP47883 348 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 LAIR2Q6ISS4 152 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 C20orf196Q8IYI0 205 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 FER1L6-AS2Q96M78 137 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 MBNL1Q9NR56 388 aaKnown RBP7.93□□□□□ -1.14
VCL-206ENST00000623461 ANXA10Q9UJ72 324 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 CCL26Q9Y258 94 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 DNAJC13O75165 2243 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 DNASE2O00115 360 aaPredicted RBP7.92□□□□□ -1.14
VCL-206ENST00000623461 SPRY1O43609 319 aaPredicted RBP7.92□□□□□ -1.14
VCL-206ENST00000623461 ENSAO43768 121 aaKnown RBP7.92□□□□□ -1.14
VCL-206ENST00000623461 BRS3P32247 399 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 GJA4P35212 333 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 SUCLG1P53597 346 aaKnown RBP7.92□□□□□ -1.14
VCL-206ENST00000623461 EXT1Q16394 746 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 GMPPAQ96IJ6 420 aaPredicted RBP7.92□□□□□ -1.14
VCL-206ENST00000623461 DOK5Q9P104 306 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 MDH2P40926 338 aaKnown RBP7.92□□□□□ -1.14
VCL-206ENST00000623461 FAM53BQ14153 422 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 TMEM251Q8N6I4 163 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 C10orf35Q96D05 121 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 DYNLRB1Q9NP97 96 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 TBC1D29Q9UFV1 150 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 TBX21Q9UL17 535 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 GALR2O43603 387 aaPredicted RBP7.92□□□□□ -1.14
VCL-206ENST00000623461 PDCD6O75340 191 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 SCRG1O75711 98 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 SCGB1C2P0DMR2 95 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 AGFG1P52594 562 aaKnown RBP7.92□□□□□ -1.14
VCL-206ENST00000623461 PLPPR5Q32ZL2 321 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 TMEM255AQ5JRV8 349 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 BPIFA4PQ86YQ2 179 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 ZNF707Q96C28 371 aaPredicted RBP7.92□□□□□ -1.14
VCL-206ENST00000623461 MVB12AQ96EY5 273 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 RNF2Q99496 336 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 P2RX4Q99571 388 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 NRSN2Q9GZP1 204 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 OCIAD1Q9NX40 245 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 SIRPB1O00241 398 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 PIAS2O75928 621 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 LYSMD4Q5XG99 296 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 ROBO4Q8WZ75 1007 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 MSL2Q9HCI7 577 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 RNF24Q9Y225 148 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 SF3B6Q9Y3B4 125 aaKnown RBP7.92□□□□□ -1.14
VCL-206ENST00000623461 LINC00587B1AMM8 73 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 TRDCB7Z8K6 153 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 H3BNC9 293 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 DHHO43323 396 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 GRPP07492 148 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 VDAC1P21796 283 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 VAX1Q5SQQ9 334 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 ZNF793Q6ZN11 406 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 FBXL14Q8N1E6 418 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 MRPL24Q96A35 216 aaKnown RBP7.92□□□□□ -1.14
VCL-206ENST00000623461 CTSVO60911 334 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 BCL2P10415 239 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 ATP6V0CP27449 155 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 CD38P28907 300 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 ACAA2P42765 397 aaKnown RBP7.92□□□□□ -1.14
VCL-206ENST00000623461 EDDM3BP56851 147 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 HFEQ30201 348 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 OR10V1Q8NGI7 309 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 PRSS3P2Q8NHM4 247 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 THOC3Q96J01 351 aaKnown RBP7.92□□□□□ -1.14
VCL-206ENST00000623461 OR1A1Q9P1Q5 309 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 CACNG5Q9UF02 275 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 STARD10Q9Y365 291 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 DSPPQ9NZW4 1301 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 A0A1B0GTH9 108 aa7.92□□□□□ -1.14
VCL-206ENST00000623461 RPS4Y1P22090 263 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms