RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 IL34Q6ZMJ4 242 aa11.25□□□□□ -0.61
MSH6-215ENST00000622629 LYZL2Q7Z4W2 148 aa11.25□□□□□ -0.61
MSH6-215ENST00000622629 HOGA1Q86XE5 327 aa11.25□□□□□ -0.61
MSH6-215ENST00000622629 RXFP4Q8TDU9 374 aa11.25□□□□□ -0.61
MSH6-215ENST00000622629 DNASE2BQ8WZ79 361 aa11.25□□□□□ -0.61
MSH6-215ENST00000622629 TGIF2Q9GZN2 237 aa11.25□□□□□ -0.61
MSH6-215ENST00000622629 MKI67P46013 3256 aaKnown RBP11.25□□□□□ -0.61
MSH6-215ENST00000622629 OR6C65A6NJZ3 312 aa11.25□□□□□ -0.61
MSH6-215ENST00000622629 DFFBO76075 338 aa11.25□□□□□ -0.61
MSH6-215ENST00000622629 SERPINA7P05543 415 aa11.25□□□□□ -0.61
MSH6-215ENST00000622629 CTSDP07339 412 aaPredicted RBP11.25□□□□□ -0.61
MSH6-215ENST00000622629 GCNT2Q8N0V5 402 aa11.25□□□□□ -0.61
MSH6-215ENST00000622629 OR13G1Q8NGZ3 307 aa11.25□□□□□ -0.61
MSH6-215ENST00000622629 FAM173AQ9BQD7 235 aa11.25□□□□□ -0.61
MSH6-215ENST00000622629 RTL8AQ9BWD3 113 aa11.25□□□□□ -0.61
MSH6-215ENST00000622629 UQCC1Q9NVA1 299 aa11.25□□□□□ -0.61
MSH6-215ENST00000622629 SH3BGRL2Q9UJC5 107 aa11.25□□□□□ -0.61
MSH6-215ENST00000622629 GPR132Q9UNW8 380 aa11.25□□□□□ -0.61
MSH6-215ENST00000622629 RCC1P18754 421 aaPredicted RBP11.24□□□□□ -0.61
MSH6-215ENST00000622629 POLR2GP62487 172 aaKnown RBP eCLIP11.24□□□□□ -0.61
MSH6-215ENST00000622629 LFNGQ8NES3 379 aa11.24□□□□□ -0.61
MSH6-215ENST00000622629 DMBX1Q8NFW5 382 aa11.24□□□□□ -0.61
MSH6-215ENST00000622629 A0A1W2PPV4 95 aa11.24□□□□□ -0.61
MSH6-215ENST00000622629 SLC25A4P12235 298 aa11.24□□□□□ -0.61
MSH6-215ENST00000622629 CA6P23280 308 aa11.24□□□□□ -0.61
MSH6-215ENST00000622629 FABP6P51161 128 aa11.24□□□□□ -0.61
MSH6-215ENST00000622629 EDDM3BP56851 147 aa11.24□□□□□ -0.61
MSH6-215ENST00000622629 CFHR1Q03591 330 aa11.24□□□□□ -0.61
MSH6-215ENST00000622629 OR8G1Q15617 311 aa11.24□□□□□ -0.61
MSH6-215ENST00000622629 HIST2H3PS2Q5TEC6 136 aa11.24□□□□□ -0.61
MSH6-215ENST00000622629 ERRFI1Q9UJM3 462 aaPredicted RBP11.24□□□□□ -0.61
MSH6-215ENST00000622629 HS3ST3B1Q9Y662 390 aa11.24□□□□□ -0.61
MSH6-215ENST00000622629 ZNF345Q14585 488 aa11.24□□□□□ -0.61
MSH6-215ENST00000622629 M1APQ8TC57 530 aa11.24□□□□□ -0.61
MSH6-215ENST00000622629 SLC2A9Q9NRM0 540 aa11.24□□□□□ -0.61
MSH6-215ENST00000622629 ADAM20O43506 726 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 IFNA4P05014 189 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 PLPPR2Q96GM1 343 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 TAAR9Q96RI9 348 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 CHRNA10Q9GZZ6 450 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 TP53TG5Q9Y2B4 290 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 PLXNA2O75051 1894 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 RNF212BA8MTL3 300 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 NPIPB7O75200 414 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 OR2C1O95371 312 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 MPLP40238 635 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 BAXQ07812 192 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 FHL1Q13642 323 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 VAX1Q5SQQ9 334 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 CST9LP1Q5W188 147 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 CXorf67Q86X51 503 aaPredicted RBP11.23□□□□□ -0.61
MSH6-215ENST00000622629 TUSC5Q8IXB3 177 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 CT55Q8WUE5 264 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 TMEM38BQ9NVV0 291 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 LPAR3Q9UBY5 353 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 TMED3Q9Y3Q3 217 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 MFSD2BA6NFX1 497 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 SURF2Q15527 256 aaPredicted RBP11.23□□□□□ -0.61
MSH6-215ENST00000622629 UBE2V2Q15819 145 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 C1QL2Q7Z5L3 287 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 FRZBQ92765 325 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 C19orf12Q9NSK7 152 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 NDRG3Q9UGV2 375 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 ZNF391Q9UJN7 358 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 POLDIP2Q9Y2S7 368 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 PLXNB3Q9ULL4 1909 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 C3orf85A0A1B0GTC6 90 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 TMEM14DPA8MWL7 114 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 NDUFA6P56556 154 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 SSPNQ14714 243 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 SNAI3Q3KNW1 292 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 FAM27BQ5VT28 67 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 FANCMQ8IYD8 2048 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 GNPNAT1Q96EK6 184 aaPredicted RBP11.23□□□□□ -0.61
MSH6-215ENST00000622629 SF3B5Q9BWJ5 86 aaKnown RBP11.23□□□□□ -0.61
MSH6-215ENST00000622629 C5orf66Q9H5L9 145 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 WDR54Q9H977 334 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 PLXNA4Q9HCM2 1894 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 AMDHD2Q9Y303 409 aa11.23□□□□□ -0.61
MSH6-215ENST00000622629 SLC22A20A6NK97 555 aa11.22□□□□□ -0.61
MSH6-215ENST00000622629 IFNA10P01566 189 aa11.22□□□□□ -0.61
MSH6-215ENST00000622629 GABRA4P48169 554 aa11.22□□□□□ -0.61
MSH6-215ENST00000622629 GNG3P63215 75 aa11.22□□□□□ -0.61
MSH6-215ENST00000622629 ZXDAP98168 799 aa11.22□□□□□ -0.61
MSH6-215ENST00000622629 PDLIM3Q53GG5 364 aaPredicted RBP11.22□□□□□ -0.61
MSH6-215ENST00000622629 STPG2Q8N412 459 aa11.22□□□□□ -0.61
MSH6-215ENST00000622629 OR2C3Q8N628 320 aa11.22□□□□□ -0.61
MSH6-215ENST00000622629 OR5C1Q8NGR4 320 aa11.22□□□□□ -0.61
MSH6-215ENST00000622629 LHFPL5Q8TAF8 219 aa11.22□□□□□ -0.61
MSH6-215ENST00000622629 STRAPQ9Y3F4 350 aaKnown RBP11.22□□□□□ -0.61
MSH6-215ENST00000622629 TRAV39A0A0B4J263 110 aa11.22□□□□□ -0.61
MSH6-215ENST00000622629 VSTM5A8MXK1 200 aa11.22□□□□□ -0.61
MSH6-215ENST00000622629 CD74P04233 296 aa11.22□□□□□ -0.61
MSH6-215ENST00000622629 KLK2P20151 261 aa11.22□□□□□ -0.61
MSH6-215ENST00000622629 RPL19P84098 196 aaKnown RBP11.22□□□□□ -0.61
MSH6-215ENST00000622629 KIAA0141Q14154 515 aaPredicted RBP11.22□□□□□ -0.61
MSH6-215ENST00000622629 ANKRD55Q3KP44 614 aa11.22□□□□□ -0.61
MSH6-215ENST00000622629 POM121Q96HA1 1249 aa11.22□□□□□ -0.61
MSH6-215ENST00000622629 OR10C1Q96KK4 312 aa11.22□□□□□ -0.61
MSH6-215ENST00000622629 OR2H1Q9GZK4 316 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms