RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 DUX4L6P0CJ89 424 aa9□□□□□ -0.97
VPS11-208ENST00000621676 DUX4L7P0CJ90 424 aa9□□□□□ -0.97
VPS11-208ENST00000621676 RPS16P62249 146 aaKnown RBP9□□□□□ -0.97
VPS11-208ENST00000621676 CNN3Q15417 329 aaKnown RBP9□□□□□ -0.97
VPS11-208ENST00000621676 C1orf185Q5T7R7 199 aa9□□□□□ -0.97
VPS11-208ENST00000621676 DUX4L9Q6RFH8 374 aaPredicted RBP9□□□□□ -0.97
VPS11-208ENST00000621676 HAVCR2Q8TDQ0 301 aa9□□□□□ -0.97
VPS11-208ENST00000621676 REPIN1Q9BWE0 567 aaKnown RBP9□□□□□ -0.97
VPS11-208ENST00000621676 PRDM14Q9GZV8 571 aa9□□□□□ -0.97
VPS11-208ENST00000621676 DUX4Q9UBX2 424 aa9□□□□□ -0.97
VPS11-208ENST00000621676 SLC23A1Q9UHI7 598 aa9□□□□□ -0.97
VPS11-208ENST00000621676 COL5A1P20908 1838 aaPredicted RBP9□□□□□ -0.97
VPS11-208ENST00000621676 TEX13DA0A0J9YY54 714 aaPredicted RBP9□□□□□ -0.97
VPS11-208ENST00000621676 TMEM82A0PJX8 343 aa9□□□□□ -0.97
VPS11-208ENST00000621676 ANKRD20A5PA0PJZ0 165 aa9□□□□□ -0.97
VPS11-208ENST00000621676 ARPC5O15511 151 aa9□□□□□ -0.97
VPS11-208ENST00000621676 SMPD2O60906 423 aa9□□□□□ -0.97
VPS11-208ENST00000621676 GSTT2P0CG29 244 aa9□□□□□ -0.97
VPS11-208ENST00000621676 GSTT2BP0CG30 244 aa9□□□□□ -0.97
VPS11-208ENST00000621676 ZNF35P13682 527 aa9□□□□□ -0.97
VPS11-208ENST00000621676 TMPRSS3P57727 454 aa9□□□□□ -0.97
VPS11-208ENST00000621676 IL13RA1P78552 427 aa9□□□□□ -0.97
VPS11-208ENST00000621676 AESQ08117 197 aa9□□□□□ -0.97
VPS11-208ENST00000621676 NSUN5P2Q63ZY6 315 aa9□□□□□ -0.97
VPS11-208ENST00000621676 FAM166AQ6J272 317 aa9□□□□□ -0.97
VPS11-208ENST00000621676 PP6455Q8WZ26 134 aa9□□□□□ -0.97
VPS11-208ENST00000621676 TAS2R8Q9NYW2 309 aa9□□□□□ -0.97
VPS11-208ENST00000621676 MGAT4AQ9UM21 535 aa9□□□□□ -0.97
VPS11-208ENST00000621676 A0A0U1RQV5 110 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 PLSCR5A0PG75 271 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 SLC22A5O76082 557 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 IGHG3P01860 377 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 PAX6P26367 422 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 THBS4P35443 961 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 ASCL1P50553 236 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 UNQ6494/PRO21346Q6UXR6 183 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 MOGAT3Q86VF5 341 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 PDZD9Q8IXQ8 264 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 ZNRF1Q8ND25 227 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 OR11H4Q8NGC9 324 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 OR56B1Q8NGI3 324 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 OR10V1Q8NGI7 309 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 IGFBPL1Q8WX77 278 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 WNT2BQ93097 391 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 MOB1AQ9H8S9 216 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 ETV7Q9Y603 341 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 CHD3Q12873 2000 aaKnown RBP8.99□□□□□ -0.97
VPS11-208ENST00000621676 RFPL4AA6NLU0 287 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 TMEM14DPA8MWL7 114 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 AHRRA9YTQ3 701 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 RFPL4AL1F8VTS6 287 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 HSD17B6O14756 317 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 CPT2P23786 658 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 AP3S2P59780 193 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 RRAS2P62070 204 aaPredicted RBP8.99□□□□□ -0.97
VPS11-208ENST00000621676 PPA1Q15181 289 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 C20orf204Q6ZNR8 217 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 WDR86Q86TI4 376 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 OR51H1Q8NH63 302 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 ITPKCQ96DU7 683 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 VSIG4Q9Y279 399 aa8.99□□□□□ -0.97
VPS11-208ENST00000621676 MRPS18CQ9Y3D5 142 aaKnown RBP8.99□□□□□ -0.97
VPS11-208ENST00000621676 OR5H1A6NKK0 313 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 XRCC2O43543 280 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 FCGR2CP31995 323 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 RPS27AP62979 156 aaKnown RBP8.98□□□□□ -0.97
VPS11-208ENST00000621676 PPP1R1AQ13522 171 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 C1orf100Q5SVJ3 147 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 ZNF808Q8N4W9 903 aaPredicted RBP8.98□□□□□ -0.97
VPS11-208ENST00000621676 SCCPDHQ8NBX0 429 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 GPX8Q8TED1 209 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 FOXRED1Q96CU9 486 aaPredicted RBP8.98□□□□□ -0.97
VPS11-208ENST00000621676 ELMOD3Q96FG2 381 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 C1QTNF5Q9BXJ0 243 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 PARP12Q9H0J9 701 aaKnown RBP8.98□□□□□ -0.97
VPS11-208ENST00000621676 ZNF391Q9UJN7 358 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 BPNT1O95861 308 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 CYB5R3P00387 301 aaPredicted RBP8.98□□□□□ -0.97
VPS11-208ENST00000621676 NUBP1P53384 320 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 SORDQ00796 357 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 CA5BP1Q8WTZ4 195 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 TMEM45BQ96B21 275 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 USB1Q9BQ65 265 aaKnown RBP8.98□□□□□ -0.97
VPS11-208ENST00000621676 SLX1AQ9BQ83 275 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 MARVELD1Q9BSK0 173 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 METTL8Q9H825 291 aaKnown RBP8.98□□□□□ -0.97
VPS11-208ENST00000621676 C1orf123Q9NWV4 160 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 TAAR3PQ9P1P4 343 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 V9GYS6 101 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 TNCP24821 2201 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 PROB1E7EW31 1015 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 RRASP10301 218 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 ZNF14P17017 642 aaPredicted RBP8.98□□□□□ -0.97
VPS11-208ENST00000621676 FAUP35544 74 aaKnown RBP8.98□□□□□ -0.97
VPS11-208ENST00000621676 FUT6P51993 359 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 TAS2R19P59542 299 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 S100A10P60903 97 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 ZMYND11Q15326 602 aa8.98□□□□□ -0.97
VPS11-208ENST00000621676 PAN3Q58A45 887 aaKnown RBP8.98□□□□□ -0.97
VPS11-208ENST00000621676 METTL11BQ5VVY1 283 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms