RNA–Protein interactions for RNA: ENST00000620254.4

CYFIP2-222, Transcript of cytoplasmic FMR1 interacting protein 2, human

APPRIS P1 TSL 1 (best) BASIC

Gene CYFIP2, Length 4,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYFIP2-222	ENST00000620254	SHANK1	Q9Y566	2161 aa		11.29	□□□□□ -0.6
CYFIP2-222	ENST00000620254	SIRPB1	O00241	398 aa		11.29	□□□□□ -0.6
CYFIP2-222	ENST00000620254	WNT9B	O14905	357 aa		11.29	□□□□□ -0.6
CYFIP2-222	ENST00000620254	SPRY3	O43610	288 aa		11.29	□□□□□ -0.6
CYFIP2-222	ENST00000620254		Q6ZR03	302 aa		11.29	□□□□□ -0.6
CYFIP2-222	ENST00000620254	WDR13	Q9H1Z4	485 aa		11.29	□□□□□ -0.6
CYFIP2-222	ENST00000620254	GHITM	Q9H3K2	345 aa		11.29	□□□□□ -0.6
CYFIP2-222	ENST00000620254	TRAV39	A0A0B4J263	110 aa		11.29	□□□□□ -0.6
CYFIP2-222	ENST00000620254	TMEM82	A0PJX8	343 aa		11.29	□□□□□ -0.6
CYFIP2-222	ENST00000620254	ABCD4	O14678	606 aa		11.29	□□□□□ -0.6
CYFIP2-222	ENST00000620254	NXPH2	O95156	264 aa		11.29	□□□□□ -0.6
CYFIP2-222	ENST00000620254	ZFP69	Q49AA0	526 aa		11.29	□□□□□ -0.6
CYFIP2-222	ENST00000620254	ADAM5	Q6NVV9	412 aa		11.29	□□□□□ -0.6
CYFIP2-222	ENST00000620254	UBALD1	Q8TB05	177 aa		11.29	□□□□□ -0.6
CYFIP2-222	ENST00000620254	OR51I2	Q9H344	312 aa		11.29	□□□□□ -0.6
CYFIP2-222	ENST00000620254	AKAP6	Q13023	2319 aa		11.29	□□□□□ -0.6
CYFIP2-222	ENST00000620254	OR2AT4	A6NND4	320 aa		11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	FOXI3	A8MTJ6	420 aa	Predicted RBP	11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	SERPINE3	A8MV23	424 aa		11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	IQCF6	A8MYZ5	107 aa		11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	PDCD6	O75340	191 aa		11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	ZNF735	P0CB33	412 aa		11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	AKR1C4	P17516	323 aa		11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	OR8G5	Q8NG78	346 aa		11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	OR13C8	Q8NGS7	320 aa		11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	MARCH1	Q8TCQ1	289 aa		11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	TUBD1	Q9UJT1	453 aa		11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	BOLA1	Q9Y3E2	137 aa		11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	GRN	P28799	593 aa	Known RBP	11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	PNLIPRP3	Q17RR3	467 aa		11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	LIN54	Q6MZP7	749 aa		11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	FAM58A	Q8N1B3	248 aa		11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	PCDHB16	Q9NRJ7	776 aa		11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	SIX6	O95475	246 aa		11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	VAMP1	P23763	118 aa		11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	SSBP1	Q04837	148 aa	Known RBP	11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	OR11H7	Q8NGC8	314 aa		11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	CASTOR1	Q8WTX7	329 aa		11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	MEMO1	Q9Y316	297 aa		11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	COL12A1	Q99715	3063 aa		11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	FUT3	P21217	361 aa		11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	CD40	P25942	277 aa		11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	ASCL4	Q6XD76	172 aa		11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	OR5T2	Q8NGG2	359 aa		11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	PIGM	Q9H3S5	423 aa		11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254	VSIG4	Q9Y279	399 aa		11.28	□□□□□ -0.6
CYFIP2-222	ENST00000620254		J3QT63	122 aa		11.27	□□□□□ -0.6
CYFIP2-222	ENST00000620254	FGF12	P61328	243 aa		11.27	□□□□□ -0.6
CYFIP2-222	ENST00000620254	MEF2D	Q14814	521 aa		11.27	□□□□□ -0.6
CYFIP2-222	ENST00000620254	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	11.27	□□□□□ -0.6
CYFIP2-222	ENST00000620254	CD74	P04233	296 aa		11.27	□□□□□ -0.61
CYFIP2-222	ENST00000620254	ATPAF1	Q5TC12	328 aa	Predicted RBP	11.27	□□□□□ -0.61
CYFIP2-222	ENST00000620254	LINC01560	Q8TB33	94 aa		11.27	□□□□□ -0.61
CYFIP2-222	ENST00000620254	CCDC107	Q8WV48	283 aa		11.27	□□□□□ -0.61
CYFIP2-222	ENST00000620254	PPP1R14B	Q96C90	147 aa		11.27	□□□□□ -0.61
CYFIP2-222	ENST00000620254	SPEF1	Q9Y4P9	236 aa		11.27	□□□□□ -0.61
CYFIP2-222	ENST00000620254	CFAP46	Q8IYW2	2715 aa		11.27	□□□□□ -0.61
CYFIP2-222	ENST00000620254	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	11.27	□□□□□ -0.61
CYFIP2-222	ENST00000620254	PLSCR5	A0PG75	271 aa		11.27	□□□□□ -0.61
CYFIP2-222	ENST00000620254	FXYD4	P59646	89 aa		11.27	□□□□□ -0.61
CYFIP2-222	ENST00000620254	DAZAP2	Q15038	168 aa	Predicted RBP	11.27	□□□□□ -0.61
CYFIP2-222	ENST00000620254	SPRN	Q5BIV9	151 aa		11.27	□□□□□ -0.61
CYFIP2-222	ENST00000620254	TMEM17	Q86X19	198 aa		11.27	□□□□□ -0.61
CYFIP2-222	ENST00000620254	ZCCHC24	Q8N2G6	241 aa	Known RBP	11.27	□□□□□ -0.61
CYFIP2-222	ENST00000620254	PRR18	Q8N4B5	295 aa		11.27	□□□□□ -0.61
CYFIP2-222	ENST00000620254	PRR7	Q8TB68	274 aa		11.27	□□□□□ -0.61
CYFIP2-222	ENST00000620254	TOMM40L	Q969M1	308 aa		11.27	□□□□□ -0.61
CYFIP2-222	ENST00000620254	PRRT1	Q99946	306 aa		11.27	□□□□□ -0.61
CYFIP2-222	ENST00000620254	VKORC1	Q9BQB6	163 aa		11.27	□□□□□ -0.61
CYFIP2-222	ENST00000620254	PPA2	Q9H2U2	334 aa		11.27	□□□□□ -0.61
CYFIP2-222	ENST00000620254	PRR13	Q9NZ81	148 aa		11.27	□□□□□ -0.61
CYFIP2-222	ENST00000620254	IGSF10	Q6WRI0	2623 aa		11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254	C7orf66	A4D0T2	115 aa		11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254	FAM172BP	A6NC97	362 aa		11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254		J3QW42	95 aa		11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254	BSPH1	Q075Z2	132 aa		11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254	MAB21L1	Q13394	359 aa		11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254	C11orf88	Q6PI97	169 aa		11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254	WFIKKN1	Q96NZ8	548 aa		11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254	MGAT4C	Q9UBM8	478 aa		11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254	ATP23	Q9Y6H3	246 aa		11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254	ZSCAN5B	A6NJL1	495 aa		11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254	CREBL2	O60519	120 aa	Predicted RBP	11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254	FCGR3A	P08637	254 aa		11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254	KLF3	P57682	345 aa	Predicted RBP	11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254	HOGA1	Q86XE5	327 aa		11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254	ELMOD3	Q96FG2	381 aa		11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254	NUDT16L1	Q9BRJ7	211 aa	Known RBP	11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254	IL36G	Q9NZH8	169 aa		11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254	TAAR3P	Q9P1P4	343 aa		11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254	LRP5L	A4QPB2	252 aa		11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254	METTL11B	Q5VVY1	283 aa		11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254	GLDN	Q6ZMI3	551 aa	Predicted RBP	11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254	ADAD2	Q8NCV1	583 aa	Known RBP	11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254	MRPS24	Q96EL2	167 aa	Known RBP	11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254	OCSTAMP	Q9BR26	566 aa		11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254	MRPL37	Q9BZE1	423 aa	Known RBP	11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254	PRORY	Q9H606	182 aa		11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.26	□□□□□ -0.61
CYFIP2-222	ENST00000620254	KNG1	P01042	644 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms