RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 AKR7LQ8NHP1 331 aa18.44■□□□□ 0.54
SGMS1-210ENST00000619438 SLC25A15Q9Y619 301 aa18.44■□□□□ 0.54
SGMS1-210ENST00000619438 TEP1Q99973 2627 aaKnown RBP18.43■□□□□ 0.54
SGMS1-210ENST00000619438 A0A1W2PP11 408 aa18.43■□□□□ 0.54
SGMS1-210ENST00000619438 DPRXA6NFQ7 191 aa18.43■□□□□ 0.54
SGMS1-210ENST00000619438 HMSDA8MTL9 139 aa18.43■□□□□ 0.54
SGMS1-210ENST00000619438 LCATP04180 440 aa18.43■□□□□ 0.54
SGMS1-210ENST00000619438 MGMTP16455 207 aa18.43■□□□□ 0.54
SGMS1-210ENST00000619438 ACKR3P25106 362 aa18.43■□□□□ 0.54
SGMS1-210ENST00000619438 HRH1P35367 487 aa18.43■□□□□ 0.54
SGMS1-210ENST00000619438 HTR2BP41595 481 aa18.43■□□□□ 0.54
SGMS1-210ENST00000619438 H2BFSP57053 126 aa18.43■□□□□ 0.54
SGMS1-210ENST00000619438 CNN3Q15417 329 aaKnown RBP18.43■□□□□ 0.54
SGMS1-210ENST00000619438 SCGB2B2Q4G0G5 96 aa18.43■□□□□ 0.54
SGMS1-210ENST00000619438 C12orf45Q8N5I9 185 aaPredicted RBP18.43■□□□□ 0.54
SGMS1-210ENST00000619438 MRGPRFQ96AM1 343 aa18.43■□□□□ 0.54
SGMS1-210ENST00000619438 AMDHD2Q9Y303 409 aa18.43■□□□□ 0.54
SGMS1-210ENST00000619438 HIVEP1P15822 2718 aa18.43■□□□□ 0.54
SGMS1-210ENST00000619438 PRR14LQ5THK1 2151 aa18.42■□□□□ 0.54
SGMS1-210ENST00000619438 F5H5P2 479 aa18.42■□□□□ 0.54
SGMS1-210ENST00000619438 ZNF81P51508 661 aa18.42■□□□□ 0.54
SGMS1-210ENST00000619438 UBE2NP61088 152 aaKnown RBP18.42■□□□□ 0.54
SGMS1-210ENST00000619438 C2orf68Q2NKX9 166 aa18.42■□□□□ 0.54
SGMS1-210ENST00000619438 HIKESHIQ53FT3 197 aa18.42■□□□□ 0.54
SGMS1-210ENST00000619438 OR52W1Q6IF63 320 aa18.42■□□□□ 0.54
SGMS1-210ENST00000619438 TMEM108Q6UXF1 575 aa18.42■□□□□ 0.54
SGMS1-210ENST00000619438 ARRDC1Q8N5I2 433 aa18.42■□□□□ 0.54
SGMS1-210ENST00000619438 OR8H1Q8NGG4 311 aa18.42■□□□□ 0.54
SGMS1-210ENST00000619438 OR51T1Q8NGJ9 327 aa18.42■□□□□ 0.54
SGMS1-210ENST00000619438 FGFBP3Q8TAT2 258 aa18.42■□□□□ 0.54
SGMS1-210ENST00000619438 ARHGAP5-AS1Q96IT6 56 aa18.42■□□□□ 0.54
SGMS1-210ENST00000619438 S100A13Q99584 98 aa18.42■□□□□ 0.54
SGMS1-210ENST00000619438 B3GNT2Q9NY97 397 aa18.42■□□□□ 0.54
SGMS1-210ENST00000619438 VSIG4Q9Y279 399 aa18.42■□□□□ 0.54
SGMS1-210ENST00000619438 CEACAM18A8MTB9 384 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 SERPINE3A8MV23 424 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 M0R1B8 84 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 CPT2P23786 658 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 SRSF4Q08170 494 aaKnown RBP18.41■□□□□ 0.54
SGMS1-210ENST00000619438 NKPD1Q17RQ9 610 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 ASCL4Q6XD76 172 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 C20orf204Q6ZNR8 217 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 WDR31Q8NA23 367 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 ZNF680Q8NEM1 530 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 OR1K1Q8NGR3 316 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 OR4K15Q8NH41 348 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 ST8SIA4Q92187 359 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 PIGTQ969N2 578 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 SPSB4Q96A44 273 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 TMEM204Q9BSN7 226 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 C1QTNF5Q9BXJ0 243 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 A0A096LPE4 126 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 hCG_38984A0A1B0GV85 526 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 A0A1W2PPZ6 126 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 GOSR2O14653 212 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 XRCC2O43543 280 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 IFNA6P05013 189 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 PATE4P0C8F1 98 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 DHRS2Q13268 280 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 DEFB113Q30KQ7 82 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 LPCAT3Q6P1A2 487 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 COLCA1Q6ZS62 124 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 TMED4Q7Z7H5 227 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 RTN4RL2Q86UN3 420 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 HOGA1Q86XE5 327 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 OR2AE1Q8NHA4 323 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 NPRL2Q8WTW4 380 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 TECTBQ96PL2 329 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 CCL19Q99731 98 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 FOXC2Q99958 501 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 ITPR3Q14573 2671 aa18.41■□□□□ 0.54
SGMS1-210ENST00000619438 ABCD4O14678 606 aa18.4■□□□□ 0.54
SGMS1-210ENST00000619438 TSC22D2O75157 780 aa18.4■□□□□ 0.54
SGMS1-210ENST00000619438 SLC22A5O76082 557 aa18.4■□□□□ 0.54
SGMS1-210ENST00000619438 COX5BP10606 129 aa18.4■□□□□ 0.54
SGMS1-210ENST00000619438 HLA-GP17693 338 aa18.4■□□□□ 0.54
SGMS1-210ENST00000619438 NFYAP23511 347 aaPredicted RBP18.4■□□□□ 0.54
SGMS1-210ENST00000619438 ZBTB25P24278 435 aa18.4■□□□□ 0.54
SGMS1-210ENST00000619438 PTAFRP25105 342 aa18.4■□□□□ 0.54
SGMS1-210ENST00000619438 ARF1P84077 181 aaKnown RBP18.4■□□□□ 0.54
SGMS1-210ENST00000619438 OR8B8Q15620 311 aa18.4■□□□□ 0.54
SGMS1-210ENST00000619438 ADAM5Q6NVV9 412 aa18.4■□□□□ 0.54
SGMS1-210ENST00000619438 LHFPL2Q6ZUX7 228 aa18.4■□□□□ 0.54
SGMS1-210ENST00000619438 OR5D18Q8NGL1 313 aa18.4■□□□□ 0.54
SGMS1-210ENST00000619438 MBD6Q96DN6 1003 aa18.4■□□□□ 0.54
SGMS1-210ENST00000619438 TMEM165Q9HC07 324 aa18.4■□□□□ 0.54
SGMS1-210ENST00000619438 GPR173Q9NS66 373 aa18.4■□□□□ 0.54
SGMS1-210ENST00000619438 VPS13CQ709C8 3753 aa18.4■□□□□ 0.54
SGMS1-210ENST00000619438 HS3ST1O14792 307 aa18.39■□□□□ 0.53
SGMS1-210ENST00000619438 ZNF35P13682 527 aa18.39■□□□□ 0.53
SGMS1-210ENST00000619438 PABPC1L2AQ5JQF8 200 aa18.39■□□□□ 0.53
SGMS1-210ENST00000619438 C1QTNF12Q5T7M4 302 aa18.39■□□□□ 0.53
SGMS1-210ENST00000619438 LYG2Q86SG7 212 aa18.39■□□□□ 0.53
SGMS1-210ENST00000619438 BCL2L2Q92843 193 aaPredicted RBP18.39■□□□□ 0.53
SGMS1-210ENST00000619438 PECRQ9BY49 303 aa18.39■□□□□ 0.53
SGMS1-210ENST00000619438 MCRIP1C9JLW8 97 aa18.38■□□□□ 0.53
SGMS1-210ENST00000619438 CSN2P05814 226 aa18.38■□□□□ 0.53
SGMS1-210ENST00000619438 BLVRBP30043 206 aaPredicted RBP18.38■□□□□ 0.53
SGMS1-210ENST00000619438 MTCP1P56278 107 aa18.38■□□□□ 0.53
SGMS1-210ENST00000619438 UBE2MP61081 183 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms