RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 C6orf201Q7Z4U5 140 aa12.17□□□□□ -0.46
CIITA-213ENST00000618327 RND1Q92730 232 aa12.17□□□□□ -0.46
CIITA-213ENST00000618327 ADAT3Q96EY9 351 aaPredicted RBP12.17□□□□□ -0.46
CIITA-213ENST00000618327 FN3KRPQ9HA64 309 aa12.17□□□□□ -0.46
CIITA-213ENST00000618327 NPBWR1P48145 328 aa12.17□□□□□ -0.46
CIITA-213ENST00000618327 RNF151Q2KHN1 245 aa12.17□□□□□ -0.46
CIITA-213ENST00000618327 ZNF441Q8N8Z8 693 aa12.17□□□□□ -0.46
CIITA-213ENST00000618327 SCCPDHQ8NBX0 429 aa12.17□□□□□ -0.46
CIITA-213ENST00000618327 UMAD1C9J7I0 102 aa12.17□□□□□ -0.46
CIITA-213ENST00000618327 IGHMP01871 453 aa12.17□□□□□ -0.46
CIITA-213ENST00000618327 RPA2P15927 270 aa12.17□□□□□ -0.46
CIITA-213ENST00000618327 PSG4Q00888 419 aa12.17□□□□□ -0.46
CIITA-213ENST00000618327 OR13C8Q8NGS7 320 aa12.17□□□□□ -0.46
CIITA-213ENST00000618327 FAAP24Q9BTP7 215 aa12.17□□□□□ -0.46
CIITA-213ENST00000618327 OSGIN2Q9Y236 505 aa12.17□□□□□ -0.46
CIITA-213ENST00000618327 A0A1W2PPH5 198 aa12.17□□□□□ -0.46
CIITA-213ENST00000618327 OR5H14A6NHG9 310 aa12.17□□□□□ -0.46
CIITA-213ENST00000618327 RD3LP0DJH9 198 aa12.17□□□□□ -0.46
CIITA-213ENST00000618327 CSRP1P21291 193 aaKnown RBP12.17□□□□□ -0.46
CIITA-213ENST00000618327 INO80CQ6PI98 192 aaPredicted RBP12.17□□□□□ -0.46
CIITA-213ENST00000618327 MAP6Q96JE9 813 aa12.17□□□□□ -0.46
CIITA-213ENST00000618327 PGLYRP3Q96LB9 341 aa12.17□□□□□ -0.46
CIITA-213ENST00000618327 TMEM231Q9H6L2 316 aa12.17□□□□□ -0.46
CIITA-213ENST00000618327 CSAG2Q9Y5P2 127 aa12.17□□□□□ -0.46
CIITA-213ENST00000618327 NUP210Q8TEM1 1887 aaPredicted RBP12.17□□□□□ -0.46
CIITA-213ENST00000618327 PYCARD-AS1I3L0S3 204 aa12.16□□□□□ -0.46
CIITA-213ENST00000618327 PSMB6P28072 239 aa12.16□□□□□ -0.46
CIITA-213ENST00000618327 KLF3P57682 345 aaPredicted RBP12.16□□□□□ -0.46
CIITA-213ENST00000618327 NAA40Q86UY6 237 aa12.16□□□□□ -0.46
CIITA-213ENST00000618327 OR8U1Q8NH10 309 aa12.16□□□□□ -0.46
CIITA-213ENST00000618327 VPS25Q9BRG1 176 aa12.16□□□□□ -0.46
CIITA-213ENST00000618327 HIPK2Q9H2X6 1198 aa12.16□□□□□ -0.46
CIITA-213ENST00000618327 AHRRA9YTQ3 701 aa12.16□□□□□ -0.46
CIITA-213ENST00000618327 PDCD6O75340 191 aa12.16□□□□□ -0.46
CIITA-213ENST00000618327 AGFG2O95081 481 aa12.16□□□□□ -0.46
CIITA-213ENST00000618327 KRTCAP3Q53RY4 240 aa12.16□□□□□ -0.46
CIITA-213ENST00000618327 MDP1Q86V88 176 aa12.16□□□□□ -0.46
CIITA-213ENST00000618327 CHST5Q9GZS9 411 aa12.16□□□□□ -0.46
CIITA-213ENST00000618327 TAAR5O14804 337 aa12.16□□□□□ -0.46
CIITA-213ENST00000618327 RIPPLY2Q5TAB7 128 aa12.16□□□□□ -0.46
CIITA-213ENST00000618327 BAP18Q8IXM2 172 aa12.16□□□□□ -0.46
CIITA-213ENST00000618327 MRPS24Q96EL2 167 aaKnown RBP12.16□□□□□ -0.46
CIITA-213ENST00000618327 ZNF230Q9UIE0 474 aaPredicted RBP12.16□□□□□ -0.46
CIITA-213ENST00000618327 LHFPL6Q9Y693 200 aa12.16□□□□□ -0.46
CIITA-213ENST00000618327 DOCK9Q9BZ29 2069 aa12.16□□□□□ -0.46
CIITA-213ENST00000618327 NDUFB6O95139 128 aa12.16□□□□□ -0.46
CIITA-213ENST00000618327 AADACP22760 399 aa12.16□□□□□ -0.46
CIITA-213ENST00000618327 MDC1Q14676 2089 aaKnown RBP12.15□□□□□ -0.46
CIITA-213ENST00000618327 F6UZH7 168 aa12.15□□□□□ -0.46
CIITA-213ENST00000618327 PNPP00491 289 aa12.15□□□□□ -0.46
CIITA-213ENST00000618327 SIGIRRQ6IA17 410 aa12.15□□□□□ -0.46
CIITA-213ENST00000618327 CD200R1LQ6Q8B3 271 aa12.15□□□□□ -0.46
CIITA-213ENST00000618327 OR2AK2Q8NG84 335 aa12.15□□□□□ -0.46
CIITA-213ENST00000618327 OR1S2Q8NGQ3 325 aa12.15□□□□□ -0.46
CIITA-213ENST00000618327 PTAFRP25105 342 aa12.15□□□□□ -0.46
CIITA-213ENST00000618327 FNDC7Q5VTL7 733 aa12.15□□□□□ -0.46
CIITA-213ENST00000618327 Q6ZRG5 221 aa12.15□□□□□ -0.46
CIITA-213ENST00000618327 FADS6Q8N9I5 356 aa12.15□□□□□ -0.46
CIITA-213ENST00000618327 RTN4IP1Q8WWV3 396 aaPredicted RBP12.15□□□□□ -0.46
CIITA-213ENST00000618327 RTN4RQ9BZR6 473 aa12.15□□□□□ -0.46
CIITA-213ENST00000618327 ZNF703Q9H7S9 590 aaPredicted RBP12.15□□□□□ -0.46
CIITA-213ENST00000618327 HIF1ANQ9NWT6 349 aa12.15□□□□□ -0.46
CIITA-213ENST00000618327 PPP1R3CQ9UQK1 317 aa12.15□□□□□ -0.46
CIITA-213ENST00000618327 ZIC3O60481 467 aa12.15□□□□□ -0.46
CIITA-213ENST00000618327 PIGPP57054 158 aa12.15□□□□□ -0.46
CIITA-213ENST00000618327 ZBTB37Q5TC79 503 aa12.15□□□□□ -0.46
CIITA-213ENST00000618327 S100A7AQ86SG5 101 aa12.15□□□□□ -0.46
CIITA-213ENST00000618327 LYG2Q86SG7 212 aa12.15□□□□□ -0.46
CIITA-213ENST00000618327 ZNF561Q8N587 486 aa12.15□□□□□ -0.46
CIITA-213ENST00000618327 OR4A16Q8NH70 328 aa12.15□□□□□ -0.46
CIITA-213ENST00000618327 GPX8Q8TED1 209 aa12.15□□□□□ -0.46
CIITA-213ENST00000618327 ZMIZ1Q9ULJ6 1067 aa12.15□□□□□ -0.46
CIITA-213ENST00000618327 RPH3ALQ9UNE2 315 aa12.15□□□□□ -0.46
CIITA-213ENST00000618327 A0A0U1RQV5 110 aa12.14□□□□□ -0.47
CIITA-213ENST00000618327 ENSAO43768 121 aaKnown RBP12.14□□□□□ -0.47
CIITA-213ENST00000618327 NKX2-1P43699 371 aaPredicted RBP12.14□□□□□ -0.47
CIITA-213ENST00000618327 CBY1Q9Y3M2 126 aa12.14□□□□□ -0.47
CIITA-213ENST00000618327 RALGAPA1Q6GYQ0 2036 aa12.14□□□□□ -0.47
CIITA-213ENST00000618327 TUBAL3A6NHL2 446 aa12.14□□□□□ -0.47
CIITA-213ENST00000618327 CTDSPLO15194 276 aa12.14□□□□□ -0.47
CIITA-213ENST00000618327 RAMP1O60894 148 aa12.14□□□□□ -0.47
CIITA-213ENST00000618327 IL3RAP26951 378 aa12.14□□□□□ -0.47
CIITA-213ENST00000618327 AANATQ16613 207 aa12.14□□□□□ -0.47
CIITA-213ENST00000618327 C1orf185Q5T7R7 199 aa12.14□□□□□ -0.47
CIITA-213ENST00000618327 CLRN3Q8NCR9 226 aa12.14□□□□□ -0.47
CIITA-213ENST00000618327 OR52B4Q8NGK2 314 aa12.14□□□□□ -0.47
CIITA-213ENST00000618327 ESRP2Q9H6T0 727 aaKnown RBP12.14□□□□□ -0.47
CIITA-213ENST00000618327 GBF1Q92538 1859 aa12.14□□□□□ -0.47
CIITA-213ENST00000618327 TRBV5-5A0A0J9YX44 114 aa12.14□□□□□ -0.47
CIITA-213ENST00000618327 LGALS8O00214 317 aa12.14□□□□□ -0.47
CIITA-213ENST00000618327 TMPRSS3P57727 454 aa12.14□□□□□ -0.47
CIITA-213ENST00000618327 TCTE3Q8IZS6 198 aa12.14□□□□□ -0.47
CIITA-213ENST00000618327 HEYLQ9NQ87 328 aaPredicted RBP12.14□□□□□ -0.47
CIITA-213ENST00000618327 SF3B6Q9Y3B4 125 aaKnown RBP12.14□□□□□ -0.47
CIITA-213ENST00000618327 A0A0G2JMM0 328 aa12.14□□□□□ -0.47
CIITA-213ENST00000618327 A0A1W2PPB8 328 aa12.14□□□□□ -0.47
CIITA-213ENST00000618327 A0A1W2PRS3 328 aa12.14□□□□□ -0.47
CIITA-213ENST00000618327 TMEM30CPA0ZSE6 113 aa12.14□□□□□ -0.47
CIITA-213ENST00000618327 KIR3DP1A8MWS1 328 aa12.14□□□□□ -0.47
CIITA-213ENST00000618327 DBX2Q6ZNG2 339 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms