RNA–Protein interactions for RNA: ENST00000617087.1

PVT1-225, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 130 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-225ENST00000617087 CEACAM16Q2WEN9 425 aa3.34□□□□□ -1.87
PVT1-225ENST00000617087 COMTD1Q86VU5 262 aa3.34□□□□□ -1.87
PVT1-225ENST00000617087 SELENOHQ8IZQ5 122 aaKnown RBP3.34□□□□□ -1.87
PVT1-225ENST00000617087 LRRC52Q8N7C0 313 aa3.34□□□□□ -1.87
PVT1-225ENST00000617087 SLC25A29Q8N8R3 303 aa3.34□□□□□ -1.87
PVT1-225ENST00000617087 OR4K2Q8NGD2 314 aa3.34□□□□□ -1.87
PVT1-225ENST00000617087 CPNE4Q96A23 557 aaPredicted RBP3.34□□□□□ -1.87
PVT1-225ENST00000617087 ZNF649Q9BS31 505 aa3.34□□□□□ -1.87
PVT1-225ENST00000617087 NLE1Q9NVX2 485 aaPredicted RBP3.34□□□□□ -1.87
PVT1-225ENST00000617087 C21orf62Q9NYP8 219 aa3.34□□□□□ -1.87
PVT1-225ENST00000617087 CBY1Q9Y3M2 126 aa3.34□□□□□ -1.87
PVT1-225ENST00000617087 ENPP4Q9Y6X5 453 aa3.34□□□□□ -1.87
PVT1-225ENST00000617087 TMEM131LA2VDJ0 1609 aa3.33□□□□□ -1.88
PVT1-225ENST00000617087 XIRP1Q702N8 1843 aaKnown RBP3.33□□□□□ -1.88
PVT1-225ENST00000617087 VWA8A3KMH1 1905 aa3.33□□□□□ -1.88
PVT1-225ENST00000617087 ISPDA4D126 451 aa3.33□□□□□ -1.88
PVT1-225ENST00000617087 SGCEO43556 437 aa3.33□□□□□ -1.88
PVT1-225ENST00000617087 GRB2P62993 217 aaKnown RBP3.33□□□□□ -1.88
PVT1-225ENST00000617087 ADIGQ0VDE8 80 aa3.33□□□□□ -1.88
PVT1-225ENST00000617087 ZNF816Q0VGE8 651 aaPredicted RBP3.33□□□□□ -1.88
PVT1-225ENST00000617087 ABCA11PQ4W5N1 156 aa3.33□□□□□ -1.88
PVT1-225ENST00000617087 CLEC19AQ6UXS0 136 aa3.33□□□□□ -1.88
PVT1-225ENST00000617087 AHSA2Q719I0 299 aa3.33□□□□□ -1.88
PVT1-225ENST00000617087 SPICQ8N5J4 248 aa3.33□□□□□ -1.88
PVT1-225ENST00000617087 RNF10Q8N5U6 811 aaKnown RBP3.33□□□□□ -1.88
PVT1-225ENST00000617087 LINC00337Q8N6G1 96 aa3.33□□□□□ -1.88
PVT1-225ENST00000617087 OR5M1Q8NGP8 315 aa3.33□□□□□ -1.88
PVT1-225ENST00000617087 OR5P2Q8WZ92 322 aa3.33□□□□□ -1.88
PVT1-225ENST00000617087 GTF2H4Q92759 462 aa3.33□□□□□ -1.88
PVT1-225ENST00000617087 RNF157Q96PX1 679 aa3.33□□□□□ -1.88
PVT1-225ENST00000617087 OR2M4Q96R27 311 aa3.33□□□□□ -1.88
PVT1-225ENST00000617087 CYTH2Q99418 400 aa3.33□□□□□ -1.88
PVT1-225ENST00000617087 DOK1Q99704 481 aa3.33□□□□□ -1.88
PVT1-225ENST00000617087 NXF2Q9GZY0 626 aaKnown RBP3.33□□□□□ -1.88
PVT1-225ENST00000617087 CHMP4BQ9H444 224 aaKnown RBP3.33□□□□□ -1.88
PVT1-225ENST00000617087 SIRT7Q9NRC8 400 aa3.33□□□□□ -1.88
PVT1-225ENST00000617087 CA10Q9NS85 328 aa3.33□□□□□ -1.88
PVT1-225ENST00000617087 FADS3Q9Y5Q0 445 aa3.33□□□□□ -1.88
PVT1-225ENST00000617087 USP42Q9H9J4 1324 aaKnown RBP3.33□□□□□ -1.88
PVT1-225ENST00000617087 SETD1AO15047 1707 aaKnown RBP3.33□□□□□ -1.88
PVT1-225ENST00000617087 CDIPTO14735 213 aa3.32□□□□□ -1.88
PVT1-225ENST00000617087 SHOX2O60902 331 aaPredicted RBP3.32□□□□□ -1.88
PVT1-225ENST00000617087 SCO1O75880 301 aa3.32□□□□□ -1.88
PVT1-225ENST00000617087 CYB5R3P00387 301 aaPredicted RBP3.32□□□□□ -1.88
PVT1-225ENST00000617087 SLC35E2BP0CK96 405 aa3.32□□□□□ -1.88
PVT1-225ENST00000617087 NELFEP18615 380 aaKnown RBP3.32□□□□□ -1.88
PVT1-225ENST00000617087 MAGEA6P43360 314 aa3.32□□□□□ -1.88
PVT1-225ENST00000617087 CMC4P56277 68 aaPredicted RBP3.32□□□□□ -1.88
PVT1-225ENST00000617087 RAB38P57729 211 aa3.32□□□□□ -1.88
PVT1-225ENST00000617087 PMVKQ15126 192 aa3.32□□□□□ -1.88
PVT1-225ENST00000617087 FAM222AQ5U5X8 452 aa3.32□□□□□ -1.88
PVT1-225ENST00000617087 OR8G5Q8NG78 346 aa3.32□□□□□ -1.88
PVT1-225ENST00000617087 OR9A2Q8NGT5 310 aa3.32□□□□□ -1.88
PVT1-225ENST00000617087 HGDQ93099 445 aa3.32□□□□□ -1.88
PVT1-225ENST00000617087 STARD4Q96DR4 205 aa3.32□□□□□ -1.88
PVT1-225ENST00000617087 SMIM8Q96KF7 97 aa3.32□□□□□ -1.88
PVT1-225ENST00000617087 CATSPER2Q96P56 530 aa3.32□□□□□ -1.88
PVT1-225ENST00000617087 BBS2Q9BXC9 721 aa3.32□□□□□ -1.88
PVT1-225ENST00000617087 MS4A12Q9NXJ0 267 aa3.32□□□□□ -1.88
PVT1-225ENST00000617087 NAIPQ13075 1403 aa3.32□□□□□ -1.88
PVT1-225ENST00000617087 NKTRP30414 1462 aaKnown RBP3.32□□□□□ -1.88
PVT1-225ENST00000617087 MIA3Q5JRA6 1907 aa3.32□□□□□ -1.88
PVT1-225ENST00000617087 KIAA1671Q9BY89 1806 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 MYO5BQ9ULV0 1848 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 NRXN3Q9Y4C0 1643 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 HFM1A2PYH4 1435 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 LOC102724200A0A096LPH7 203 aaPredicted RBP3.31□□□□□ -1.88
PVT1-225ENST00000617087 IGHV1-3A0A0C4DH29 117 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 A0A0G2JMP0 313 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 A0A0X1KG70 313 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 TMEM72A0PK05 275 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 ZNF233A6NK53 670 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 MAGEB4O15481 346 aaPredicted RBP3.31□□□□□ -1.88
PVT1-225ENST00000617087 NDUFS6O75380 124 aaKnown RBP3.31□□□□□ -1.88
PVT1-225ENST00000617087 MPZL1O95297 269 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 OR4Q2P0C623 313 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 HLA-GP17693 338 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 EIF4EBP1Q13541 118 aaPredicted RBP3.31□□□□□ -1.88
PVT1-225ENST00000617087 TPBGQ13641 420 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 DMC1Q14565 340 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 SHHQ15465 462 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 MAPRE2Q15555 327 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 OR4D1Q15615 310 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 BSXQ3C1V8 233 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 LINC00303Q3SY05 128 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 HBMQ6B0K9 141 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 ERICH5Q6P6B1 374 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 LRRC6Q86X45 466 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 ZNF101Q8IZC7 436 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 ORMDL3Q8N138 153 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 CYP4Z2PQ8N1L4 340 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 CCNYL1Q8N7R7 359 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 SPANXA2-OT1Q8N9U9 137 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 CLHC1Q8NHS4 586 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 ORAOV1Q8WV07 137 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 TRNT1Q96Q11 434 aaKnown RBP3.31□□□□□ -1.88
PVT1-225ENST00000617087 SPIN2AQ99865 258 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 SPIN2BQ9BPZ2 258 aa3.31□□□□□ -1.88
PVT1-225ENST00000617087 METTL8Q9H825 291 aaKnown RBP3.31□□□□□ -1.88
PVT1-225ENST00000617087 IFT46Q9NQC8 304 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms