RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 LHX4Q969G2 390 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 BRCA1P38398 1863 aaKnown RBP13.01□□□□□ -0.33
SNPH-203ENST00000614659 ZNF83P51522 516 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 KLF3P57682 345 aaPredicted RBP13.01□□□□□ -0.33
SNPH-203ENST00000614659 UBE2G2P60604 165 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 FUT5Q11128 374 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 ZAR1Q86SH2 424 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 THNSL2Q86YJ6 484 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 ZNF721Q8TF20 911 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 TRGV10A0A0A0MS01 117 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 A0A1B0GTH9 108 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 FAM221AA4D161 298 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 M0QZ24 198 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 ASAH2BP0C7U1 165 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 EDN3P14138 238 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 SELENOPP49908 381 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 GPM6AP51674 278 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 RSPO4Q2I0M5 234 aaPredicted RBP13.01□□□□□ -0.33
SNPH-203ENST00000614659 SLC24A4Q8NFF2 622 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 SLC39A7Q92504 469 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 RPUSD4Q96CM3 377 aaKnown RBP13.01□□□□□ -0.33
SNPH-203ENST00000614659 ZNF501Q96CX3 271 aaPredicted RBP13.01□□□□□ -0.33
SNPH-203ENST00000614659 GPR137Q96N19 417 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 MPC1Q9Y5U8 109 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 PTPRFP10586 1907 aa13.01□□□□□ -0.33
SNPH-203ENST00000614659 CCL21O00585 134 aa13□□□□□ -0.33
SNPH-203ENST00000614659 RRASP10301 218 aa13□□□□□ -0.33
SNPH-203ENST00000614659 AGFG1P52594 562 aaKnown RBP13□□□□□ -0.33
SNPH-203ENST00000614659 IFITM3Q01628 133 aa13□□□□□ -0.33
SNPH-203ENST00000614659 C19orf57Q0VDD7 668 aa13□□□□□ -0.33
SNPH-203ENST00000614659 ZNF345Q14585 488 aa13□□□□□ -0.33
SNPH-203ENST00000614659 KHDC1LQ5JSQ8 128 aa13□□□□□ -0.33
SNPH-203ENST00000614659 C1orf185Q5T7R7 199 aa13□□□□□ -0.33
SNPH-203ENST00000614659 PRDM6Q9NQX0 595 aa13□□□□□ -0.33
SNPH-203ENST00000614659 HLA-DQB1P01920 261 aa13□□□□□ -0.33
SNPH-203ENST00000614659 PTHLHP12272 177 aa13□□□□□ -0.33
SNPH-203ENST00000614659 SPINK14Q6IE38 97 aa13□□□□□ -0.33
SNPH-203ENST00000614659 SPP1P10451 314 aa13□□□□□ -0.33
SNPH-203ENST00000614659 CTRB1P17538 263 aa13□□□□□ -0.33
SNPH-203ENST00000614659 CSRP1P21291 193 aaKnown RBP13□□□□□ -0.33
SNPH-203ENST00000614659 BMI1P35226 326 aa13□□□□□ -0.33
SNPH-203ENST00000614659 UBE2G1P62253 170 aa13□□□□□ -0.33
SNPH-203ENST00000614659 CTRB2Q6GPI1 263 aa13□□□□□ -0.33
SNPH-203ENST00000614659 OR2M7Q8NG81 312 aa13□□□□□ -0.33
SNPH-203ENST00000614659 NRTNQ99748 197 aa13□□□□□ -0.33
SNPH-203ENST00000614659 ZNF230Q9UIE0 474 aaPredicted RBP13□□□□□ -0.33
SNPH-203ENST00000614659 SCN10AQ9Y5Y9 1956 aa13□□□□□ -0.33
SNPH-203ENST00000614659 PNPP00491 289 aa13□□□□□ -0.33
SNPH-203ENST00000614659 ZNF32P17041 273 aa13□□□□□ -0.33
SNPH-203ENST00000614659 HOXA6P31267 233 aa13□□□□□ -0.33
SNPH-203ENST00000614659 TPPP2P59282 170 aa13□□□□□ -0.33
SNPH-203ENST00000614659 SOX7Q9BT81 388 aa13□□□□□ -0.33
SNPH-203ENST00000614659 TPPP3Q9BW30 176 aa13□□□□□ -0.33
SNPH-203ENST00000614659 C3orf85A0A1B0GTC6 90 aa12.99□□□□□ -0.33
SNPH-203ENST00000614659 NTF3P20783 257 aa12.99□□□□□ -0.33
SNPH-203ENST00000614659 ACP1P24666 158 aa12.99□□□□□ -0.33
SNPH-203ENST00000614659 KIR2DS2P43631 304 aa12.99□□□□□ -0.33
SNPH-203ENST00000614659 PRDX4Q13162 271 aa12.99□□□□□ -0.33
SNPH-203ENST00000614659 OR11H7Q8NGC8 314 aa12.99□□□□□ -0.33
SNPH-203ENST00000614659 TRBV5-5A0A0J9YX44 114 aa12.99□□□□□ -0.33
SNPH-203ENST00000614659 SMIM10L1P0DMW3 83 aa12.99□□□□□ -0.33
SNPH-203ENST00000614659 SLC25A4P12235 298 aa12.99□□□□□ -0.33
SNPH-203ENST00000614659 PAX6P26367 422 aa12.99□□□□□ -0.33
SNPH-203ENST00000614659 ZNF574Q6ZN55 896 aaPredicted RBP12.99□□□□□ -0.33
SNPH-203ENST00000614659 SMIM10Q96HG1 83 aa12.99□□□□□ -0.33
SNPH-203ENST00000614659 GMPPAQ96IJ6 420 aaPredicted RBP12.99□□□□□ -0.33
SNPH-203ENST00000614659 OPN4Q9UHM6 478 aa12.99□□□□□ -0.33
SNPH-203ENST00000614659 CBY3A6NI87 242 aa12.99□□□□□ -0.33
SNPH-203ENST00000614659 P2RY1P47900 373 aa12.99□□□□□ -0.33
SNPH-203ENST00000614659 ZNF774Q6NX45 483 aa12.99□□□□□ -0.33
SNPH-203ENST00000614659 A0A0G2JMZ2 1700 aa12.99□□□□□ -0.33
SNPH-203ENST00000614659 LRRC37A2A6NM11 1700 aa12.99□□□□□ -0.33
SNPH-203ENST00000614659 DXOO77932 396 aaKnown RBP12.99□□□□□ -0.33
SNPH-203ENST00000614659 MBPP02686 304 aaPredicted RBP12.99□□□□□ -0.33
SNPH-203ENST00000614659 GUK1Q16774 197 aa12.99□□□□□ -0.33
SNPH-203ENST00000614659 MICBQ29980 383 aa12.99□□□□□ -0.33
SNPH-203ENST00000614659 GGNBP1Q5YKI7 109 aa12.99□□□□□ -0.33
SNPH-203ENST00000614659 LINC00596Q86U02 117 aa12.99□□□□□ -0.33
SNPH-203ENST00000614659 SLC26A10Q8NG04 563 aa12.99□□□□□ -0.33
SNPH-203ENST00000614659 RNF24Q9Y225 148 aa12.99□□□□□ -0.33
SNPH-203ENST00000614659 TRIP12Q14669 1992 aaPredicted RBP12.99□□□□□ -0.33
SNPH-203ENST00000614659 MEOX2P50222 304 aa12.98□□□□□ -0.33
SNPH-203ENST00000614659 CD300CQ08708 224 aa12.98□□□□□ -0.33
SNPH-203ENST00000614659 ZNF441Q8N8Z8 693 aa12.98□□□□□ -0.33
SNPH-203ENST00000614659 TMEM52Q8NDY8 209 aa12.98□□□□□ -0.33
SNPH-203ENST00000614659 CMBLQ96DG6 245 aa12.98□□□□□ -0.33
SNPH-203ENST00000614659 CLEC18AA5D8T8 446 aa12.98□□□□□ -0.33
SNPH-203ENST00000614659 LEUTXA8MZ59 168 aa12.98□□□□□ -0.33
SNPH-203ENST00000614659 DVL1O14640 695 aa12.98□□□□□ -0.33
SNPH-203ENST00000614659 SNRPEP62304 92 aaKnown RBP12.98□□□□□ -0.33
SNPH-203ENST00000614659 INPP5JQ15735 1006 aaPredicted RBP12.98□□□□□ -0.33
SNPH-203ENST00000614659 CLEC18CQ8NCF0 446 aa12.98□□□□□ -0.33
SNPH-203ENST00000614659 DEFB108BQ8NET1 73 aa12.98□□□□□ -0.33
SNPH-203ENST00000614659 OR5B3Q8NH48 314 aa12.98□□□□□ -0.33
SNPH-203ENST00000614659 CHRDL1Q9BU40 450 aa12.98□□□□□ -0.33
SNPH-203ENST00000614659 ADAT1Q9BUB4 502 aaKnown RBP12.98□□□□□ -0.33
SNPH-203ENST00000614659 TAAR3PQ9P1P4 343 aa12.98□□□□□ -0.33
SNPH-203ENST00000614659 AMMECR1Q9Y4X0 333 aaPredicted RBP12.98□□□□□ -0.33
SNPH-203ENST00000614659 BPIFB3P59826 476 aa12.98□□□□□ -0.33
SNPH-203ENST00000614659 PRSS53Q2L4Q9 553 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms