RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 PHYHD1Q5SRE7 291 aa9.46□□□□□ -0.89
SENP3-EIF4A1-201ENST00000614237 DCAF12Q5T6F0 453 aa9.46□□□□□ -0.89
SENP3-EIF4A1-201ENST00000614237 PEG10Q86TG7 708 aaKnown RBP9.46□□□□□ -0.89
SENP3-EIF4A1-201ENST00000614237 GGNQ86UU5 652 aa9.46□□□□□ -0.89
SENP3-EIF4A1-201ENST00000614237 WFIKKN1Q96NZ8 548 aa9.46□□□□□ -0.89
SENP3-EIF4A1-201ENST00000614237 FSCN3Q9NQT6 498 aa9.46□□□□□ -0.89
SENP3-EIF4A1-201ENST00000614237 PCSK5Q92824 1860 aa9.46□□□□□ -0.89
SENP3-EIF4A1-201ENST00000614237 A0A0A6YYD4 124 aa9.46□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 IGKV1-9A0A0C4DH69 117 aa9.46□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 TERTO14746 1132 aaKnown RBP9.46□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 RER1O15258 196 aa9.46□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 SCAF4O95104 1147 aaKnown RBP9.46□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 RBMXP38159 391 aaKnown RBP9.46□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 SSX2Q16385 188 aa9.46□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 MICBQ29980 383 aa9.46□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 PHLDA2Q53GA4 152 aa9.46□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 MEX3BQ6ZN04 569 aaKnown RBP9.46□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 STX12Q86Y82 276 aa9.46□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 TMEM217Q8N7C4 229 aa9.46□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 OR5H2Q8NGV7 314 aa9.46□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 MRPS28Q9Y2Q9 187 aaKnown RBP9.46□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 PI4KAP42356 2102 aa9.46□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 ZNF716A6NP11 495 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 AP4M1O00189 453 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 WRBO00258 174 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 CFIP05156 583 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 SERPINA7P05543 415 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 HIST1H1DP16402 221 aaKnown RBP9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 RPL12P30050 165 aaKnown RBP9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 CDAP32320 146 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 OPRM1P35372 400 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 NOVA1P51513 510 aaKnown RBP9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 TMEM33P57088 247 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 RAB35Q15286 201 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 SULF2Q8IWU5 870 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 MARS2Q96GW9 593 aaKnown RBP9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 LIN37Q96GY3 246 aaPredicted RBP9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 TCFL5Q9UL49 500 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 HSF4Q9ULV5 492 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 A0A0J9YW62 118 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 RRP8O43159 456 aaKnown RBP9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 CYB5BO43169 146 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 CELA2AP08217 269 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 GABRR1P24046 479 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 PPP1CCP36873 323 aaKnown RBP9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 RNF212Q495C1 297 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 TRIM61Q5EBN2 209 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 TMEM42Q69YG0 159 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 GLIPR1L1Q6UWM5 242 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 LHFPL1Q86WI0 220 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 ZFP62Q8NB50 900 aaPredicted RBP9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 ERGIC1Q969X5 290 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 RNF122Q9H9V4 155 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 CYTL1Q9NRR1 136 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 DECR2Q9NUI1 292 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 DNAJB11Q9UBS4 358 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 DKKL1Q9UK85 242 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 IGKV3D-15A0A087WSY6 115 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 OR6C6A6NF89 314 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 NPIPA2E9PIF3 369 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 NPIPA3F8WFD2 350 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 SYNGR3O43761 229 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 FAM157CP0CG43 387 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 PMELP40967 661 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 SPNS3Q6ZMD2 512 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 ABHD12BQ7Z5M8 362 aaPredicted RBP9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 LURAP1LQ8IV03 231 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 NECAP1Q8NC96 275 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 HPSE2Q8WWQ2 592 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 HAS2Q92819 552 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 TAAR9Q96RI9 348 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 CDC6Q99741 560 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 URM1Q9BTM9 101 aaKnown RBP9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 CNTNAP3Q9BZ76 1288 aa9.45□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 TRBV6-7A0A0A0MS04 114 aa9.44□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 ZNHIT1O43257 154 aa9.44□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 DUS4LO95620 317 aaKnown RBP9.44□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 MT-ND4LP03901 98 aa9.44□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 SELLP14151 372 aa9.44□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 TAGLN2P37802 199 aaKnown RBP9.44□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 ECI1P42126 302 aa9.44□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 GUCA1AP43080 201 aaPredicted RBP9.44□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 TMEM50BP56557 158 aa9.44□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 Q0VFX4 171 aa9.44□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 SOHLH1Q5JUK2 328 aa9.44□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 PLXDC2Q6UX71 529 aa9.44□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 C6orf15Q6UXA7 325 aaPredicted RBP9.44□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 SPTSSAQ969W0 71 aa9.44□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 SPSB1Q96BD6 273 aa9.44□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 ARHGAP5-AS1Q96IT6 56 aa9.44□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 SCGB3A2Q96PL1 93 aa9.44□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 ZNF385AQ96PM9 386 aaKnown RBP9.44□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 HDHD3Q9BSH5 251 aaPredicted RBP9.44□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 ABHD14AQ9BUJ0 271 aa9.44□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 LINC00470Q9BZP3 86 aa9.44□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 MAGT1Q9H0U3 335 aa9.44□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 UFSP2Q9NUQ7 469 aa9.44□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 PADI1Q9ULC6 663 aa9.44□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 LRRC3CA6NJW4 275 aa9.44□□□□□ -0.9
SENP3-EIF4A1-201ENST00000614237 SERPINE3A8MV23 424 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms