RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 STRCP1A6NGW2 1772 aa17.81■□□□□ 0.44
CTDP1-208ENST00000613122 ATXN7O15265 892 aaPredicted RBP17.81■□□□□ 0.44
CTDP1-208ENST00000613122 PEBP1P30086 187 aaKnown RBP17.81■□□□□ 0.44
CTDP1-208ENST00000613122 BCL2L11O43521 198 aa17.81■□□□□ 0.44
CTDP1-208ENST00000613122 SLC38A11Q08AI6 406 aa17.81■□□□□ 0.44
CTDP1-208ENST00000613122 DDA1Q9BW61 102 aa17.81■□□□□ 0.44
CTDP1-208ENST00000613122 NKX6-2Q9C056 277 aaPredicted RBP17.81■□□□□ 0.44
CTDP1-208ENST00000613122 RASL12Q9NYN1 266 aa17.81■□□□□ 0.44
CTDP1-208ENST00000613122 SMCHD1A6NHR9 2005 aa17.81■□□□□ 0.44
CTDP1-208ENST00000613122 CDIPTO14735 213 aa17.81■□□□□ 0.44
CTDP1-208ENST00000613122 WNT1P04628 370 aa17.81■□□□□ 0.44
CTDP1-208ENST00000613122 CD96P40200 585 aa17.81■□□□□ 0.44
CTDP1-208ENST00000613122 FNDC7Q5VTL7 733 aa17.81■□□□□ 0.44
CTDP1-208ENST00000613122 SCN1AP35498 2009 aa17.81■□□□□ 0.44
CTDP1-208ENST00000613122 MS4A18H0YCH9 400 aa17.81■□□□□ 0.44
CTDP1-208ENST00000613122 FOXS1O43638 330 aa17.81■□□□□ 0.44
CTDP1-208ENST00000613122 HOXD4P09016 255 aaPredicted RBP17.81■□□□□ 0.44
CTDP1-208ENST00000613122 FAM3AP98173 230 aa17.81■□□□□ 0.44
CTDP1-208ENST00000613122 MS4A18Q3C1V0 323 aa17.81■□□□□ 0.44
CTDP1-208ENST00000613122 ZNF260Q3ZCT1 412 aa17.81■□□□□ 0.44
CTDP1-208ENST00000613122 CXorf58Q96LI9 332 aa17.81■□□□□ 0.44
CTDP1-208ENST00000613122 G3V3Q6 166 aa17.8■□□□□ 0.44
CTDP1-208ENST00000613122 ZNF205O95201 554 aa17.8■□□□□ 0.44
CTDP1-208ENST00000613122 COL19A1Q14993 1142 aa17.8■□□□□ 0.44
CTDP1-208ENST00000613122 FFAR4Q5NUL3 377 aa17.8■□□□□ 0.44
CTDP1-208ENST00000613122 LRRTM1Q86UE6 522 aa17.8■□□□□ 0.44
CTDP1-208ENST00000613122 C10orf35Q96D05 121 aa17.8■□□□□ 0.44
CTDP1-208ENST00000613122 CES1P1Q9UKY3 287 aa17.8■□□□□ 0.44
CTDP1-208ENST00000613122 DNPH1O43598 174 aa17.8■□□□□ 0.44
CTDP1-208ENST00000613122 OR2J3O76001 311 aa17.8■□□□□ 0.44
CTDP1-208ENST00000613122 SPP1P10451 314 aa17.8■□□□□ 0.44
CTDP1-208ENST00000613122 ZNF721Q8TF20 911 aa17.8■□□□□ 0.44
CTDP1-208ENST00000613122 WDR61Q9GZS3 305 aaKnown RBP17.8■□□□□ 0.44
CTDP1-208ENST00000613122 WDR31Q8NA23 367 aa17.8■□□□□ 0.44
CTDP1-208ENST00000613122 SPINK2P20155 84 aa17.8■□□□□ 0.44
CTDP1-208ENST00000613122 ZNF770Q6IQ21 691 aaPredicted RBP17.8■□□□□ 0.44
CTDP1-208ENST00000613122 SPNS3Q6ZMD2 512 aa17.8■□□□□ 0.44
CTDP1-208ENST00000613122 GLDNQ6ZMI3 551 aaPredicted RBP17.8■□□□□ 0.44
CTDP1-208ENST00000613122 SLC25A40Q8TBP6 338 aa17.8■□□□□ 0.44
CTDP1-208ENST00000613122 PECRQ9BY49 303 aa17.8■□□□□ 0.44
CTDP1-208ENST00000613122 MRM2Q9UI43 246 aaKnown RBP17.8■□□□□ 0.44
CTDP1-208ENST00000613122 SFT2D2O95562 160 aa17.8■□□□□ 0.44
CTDP1-208ENST00000613122 OR5M8Q8NGP6 311 aa17.8■□□□□ 0.44
CTDP1-208ENST00000613122 PLAC1Q9HBJ0 212 aa17.8■□□□□ 0.44
CTDP1-208ENST00000613122 TMEM38BQ9NVV0 291 aa17.8■□□□□ 0.44
CTDP1-208ENST00000613122 CACNG5Q9UF02 275 aa17.8■□□□□ 0.44
CTDP1-208ENST00000613122 IGHA2P01877 340 aa17.79■□□□□ 0.44
CTDP1-208ENST00000613122 OPN1MWP04001 364 aa17.79■□□□□ 0.44
CTDP1-208ENST00000613122 SLC25A5P05141 298 aaKnown RBP17.79■□□□□ 0.44
CTDP1-208ENST00000613122 OPN1MW2P0DN77 364 aa17.79■□□□□ 0.44
CTDP1-208ENST00000613122 OPN1MW3P0DN78 364 aa17.79■□□□□ 0.44
CTDP1-208ENST00000613122 MAP6Q96JE9 813 aa17.79■□□□□ 0.44
CTDP1-208ENST00000613122 NAA60Q9H7X0 242 aa17.79■□□□□ 0.44
CTDP1-208ENST00000613122 PTHLHP12272 177 aa17.79■□□□□ 0.44
CTDP1-208ENST00000613122 PDZK1IP1Q13113 114 aa17.79■□□□□ 0.44
CTDP1-208ENST00000613122 SLC22A18ASQ8N1D0 253 aa17.79■□□□□ 0.44
CTDP1-208ENST00000613122 RELL2Q8NC24 303 aaPredicted RBP17.79■□□□□ 0.44
CTDP1-208ENST00000613122 CLEC5AQ9NY25 188 aa17.79■□□□□ 0.44
CTDP1-208ENST00000613122 BCL3P20749 454 aa17.79■□□□□ 0.44
CTDP1-208ENST00000613122 ETV3LQ6ZN32 361 aa17.79■□□□□ 0.44
CTDP1-208ENST00000613122 ZNF574Q6ZN55 896 aaPredicted RBP17.79■□□□□ 0.44
CTDP1-208ENST00000613122 INSL4Q14641 139 aa17.79■□□□□ 0.44
CTDP1-208ENST00000613122 SPINK9Q5DT21 86 aa17.79■□□□□ 0.44
CTDP1-208ENST00000613122 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.79■□□□□ 0.44
CTDP1-208ENST00000613122 SSX7Q7RTT5 188 aa17.79■□□□□ 0.44
CTDP1-208ENST00000613122 OR8D4Q8NGM9 314 aa17.79■□□□□ 0.44
CTDP1-208ENST00000613122 NTNG2Q96CW9 530 aa17.79■□□□□ 0.44
CTDP1-208ENST00000613122 MRPS18BQ9Y676 258 aaKnown RBP17.79■□□□□ 0.44
CTDP1-208ENST00000613122 FABP9Q0Z7S8 132 aa17.78■□□□□ 0.44
CTDP1-208ENST00000613122 COL13A1Q5TAT6 717 aaPredicted RBP17.78■□□□□ 0.44
CTDP1-208ENST00000613122 SPICQ8N5J4 248 aa17.78■□□□□ 0.44
CTDP1-208ENST00000613122 PCMT1P22061 227 aa17.78■□□□□ 0.44
CTDP1-208ENST00000613122 ERVFC1-1P60608 527 aa17.78■□□□□ 0.44
CTDP1-208ENST00000613122 MTFP1Q9UDX5 166 aa17.78■□□□□ 0.44
CTDP1-208ENST00000613122 ADAM10O14672 748 aa17.78■□□□□ 0.44
CTDP1-208ENST00000613122 NDUFB6O95139 128 aa17.78■□□□□ 0.44
CTDP1-208ENST00000613122 FCER1GP30273 86 aa17.78■□□□□ 0.44
CTDP1-208ENST00000613122 C11orf87Q6NUJ2 197 aa17.78■□□□□ 0.44
CTDP1-208ENST00000613122 FAM103A1Q9BTL3 118 aaKnown RBP17.78■□□□□ 0.44
CTDP1-208ENST00000613122 RAB18Q9NP72 206 aa17.78■□□□□ 0.44
CTDP1-208ENST00000613122 CLN8Q9UBY8 286 aa17.78■□□□□ 0.44
CTDP1-208ENST00000613122 SLC45A2Q9UMX9 530 aa17.78■□□□□ 0.44
CTDP1-208ENST00000613122 MRPL22Q9NWU5 206 aaKnown RBP17.78■□□□□ 0.44
CTDP1-208ENST00000613122 TRDCB7Z8K6 153 aa17.78■□□□□ 0.44
CTDP1-208ENST00000613122 NKX2-8O15522 239 aa17.78■□□□□ 0.44
CTDP1-208ENST00000613122 C17orf47Q8NEP4 570 aa17.78■□□□□ 0.44
CTDP1-208ENST00000613122 SHANK3Q9BYB0 1731 aa17.77■□□□□ 0.44
CTDP1-208ENST00000613122 CRYBB2P43320 205 aa17.77■□□□□ 0.44
CTDP1-208ENST00000613122 OR5R1Q8NH85 324 aa17.77■□□□□ 0.44
CTDP1-208ENST00000613122 OR1A1Q9P1Q5 309 aa17.77■□□□□ 0.44
CTDP1-208ENST00000613122 PILRBQ9UKJ0 227 aa17.77■□□□□ 0.44
CTDP1-208ENST00000613122 RFPL4AA6NLU0 287 aa17.77■□□□□ 0.44
CTDP1-208ENST00000613122 RFPL4AL1F8VTS6 287 aa17.77■□□□□ 0.44
CTDP1-208ENST00000613122 IGHA1P01876 353 aa17.77■□□□□ 0.44
CTDP1-208ENST00000613122 BGLAPP02818 100 aa17.77■□□□□ 0.44
CTDP1-208ENST00000613122 LYZP61626 148 aa17.77■□□□□ 0.44
CTDP1-208ENST00000613122 OR1L4Q8NGR5 311 aa17.77■□□□□ 0.44
CTDP1-208ENST00000613122 CABLES2Q9BTV7 478 aa17.77■□□□□ 0.44
CTDP1-208ENST00000613122 AKIP1Q9NQ31 210 aa17.77■□□□□ 0.44
CTDP1-208ENST00000613122 ARPC4-TTLL3A0A0A6YYG9 625 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms