RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 WISP2O76076 250 aa12.14□□□□□ -0.47
PCDHGA3-202ENST00000612467 DIRAS3O95661 229 aa12.14□□□□□ -0.47
PCDHGA3-202ENST00000612467 ACTL6AO96019 429 aa12.14□□□□□ -0.47
PCDHGA3-202ENST00000612467 ZNF708P17019 499 aa12.14□□□□□ -0.47
PCDHGA3-202ENST00000612467 SRSF6Q13247 344 aaKnown RBP12.14□□□□□ -0.47
PCDHGA3-202ENST00000612467 FAM189A2Q15884 450 aa12.14□□□□□ -0.47
PCDHGA3-202ENST00000612467 GGNBP1Q5YKI7 109 aa12.14□□□□□ -0.47
PCDHGA3-202ENST00000612467 TMPRSS7Q7RTY8 843 aa12.14□□□□□ -0.47
PCDHGA3-202ENST00000612467 C10orf35Q96D05 121 aa12.14□□□□□ -0.47
PCDHGA3-202ENST00000612467 MED12LQ86YW9 2145 aa12.14□□□□□ -0.47
PCDHGA3-202ENST00000612467 KRBOX1C9JBD0 128 aa12.14□□□□□ -0.47
PCDHGA3-202ENST00000612467 XRCC2O43543 280 aa12.14□□□□□ -0.47
PCDHGA3-202ENST00000612467 TNFSF15O95150 251 aa12.14□□□□□ -0.47
PCDHGA3-202ENST00000612467 FARS2O95363 451 aaKnown RBP12.14□□□□□ -0.47
PCDHGA3-202ENST00000612467 IL15RAQ13261 267 aa12.14□□□□□ -0.47
PCDHGA3-202ENST00000612467 OR8B8Q15620 311 aa12.14□□□□□ -0.47
PCDHGA3-202ENST00000612467 HIKESHIQ53FT3 197 aa12.14□□□□□ -0.47
PCDHGA3-202ENST00000612467 RIPPLY2Q5TAB7 128 aa12.14□□□□□ -0.47
PCDHGA3-202ENST00000612467 LYZL2Q7Z4W2 148 aa12.14□□□□□ -0.47
PCDHGA3-202ENST00000612467 BAP18Q8IXM2 172 aa12.14□□□□□ -0.47
PCDHGA3-202ENST00000612467 AIFM2Q9BRQ8 373 aa12.14□□□□□ -0.47
PCDHGA3-202ENST00000612467 ZC4H2Q9NQZ6 224 aa12.14□□□□□ -0.47
PCDHGA3-202ENST00000612467 SLC7A11Q9UPY5 501 aa12.14□□□□□ -0.47
PCDHGA3-202ENST00000612467 STARD10Q9Y365 291 aa12.14□□□□□ -0.47
PCDHGA3-202ENST00000612467 ZNF816-ZNF321PA0A0X1KG74 233 aa12.13□□□□□ -0.47
PCDHGA3-202ENST00000612467 FAM74A7A6NL05 159 aa12.13□□□□□ -0.47
PCDHGA3-202ENST00000612467 M0R296 226 aa12.13□□□□□ -0.47
PCDHGA3-202ENST00000612467 HAAOP46952 286 aa12.13□□□□□ -0.47
PCDHGA3-202ENST00000612467 AIMP2Q13155 320 aaKnown RBP12.13□□□□□ -0.47
PCDHGA3-202ENST00000612467 STK11Q15831 433 aa12.13□□□□□ -0.47
PCDHGA3-202ENST00000612467 FAM74A3Q4VXF1 159 aa12.13□□□□□ -0.47
PCDHGA3-202ENST00000612467 SPATA46Q5T0L3 261 aa12.13□□□□□ -0.47
PCDHGA3-202ENST00000612467 NSUN5P2Q63ZY6 315 aa12.13□□□□□ -0.47
PCDHGA3-202ENST00000612467 OR5T2Q8NGG2 359 aa12.13□□□□□ -0.47
PCDHGA3-202ENST00000612467 HPSE2Q8WWQ2 592 aa12.13□□□□□ -0.47
PCDHGA3-202ENST00000612467 FBXO24O75426 580 aa12.13□□□□□ -0.47
PCDHGA3-202ENST00000612467 MT-CO3P00414 261 aa12.13□□□□□ -0.47
PCDHGA3-202ENST00000612467 ZNF728P0DKX0 622 aa12.13□□□□□ -0.47
PCDHGA3-202ENST00000612467 FUT6P51993 359 aa12.13□□□□□ -0.47
PCDHGA3-202ENST00000612467 PMP22Q01453 160 aa12.13□□□□□ -0.47
PCDHGA3-202ENST00000612467 SGPP2Q8IWX5 399 aa12.13□□□□□ -0.47
PCDHGA3-202ENST00000612467 LRRC46Q96FV0 321 aa12.13□□□□□ -0.47
PCDHGA3-202ENST00000612467 SCGB3A2Q96PL1 93 aa12.13□□□□□ -0.47
PCDHGA3-202ENST00000612467 ZNF552Q9H707 407 aaPredicted RBP12.13□□□□□ -0.47
PCDHGA3-202ENST00000612467 PLA2G2EQ9NZK7 142 aa12.13□□□□□ -0.47
PCDHGA3-202ENST00000612467 CRYM-AS1A6NIL9 109 aa12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 SLC33A1O00400 549 aaPredicted RBP12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 TPT1P13693 172 aaKnown RBP12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 MEOX1P50221 254 aa12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 PCBD1P61457 104 aa12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 CYCSP99999 105 aaKnown RBP12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 PRDX4Q13162 271 aa12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 TSC22D1Q15714 1073 aa12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 RNFT1Q5M7Z0 435 aa12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 HES3Q5TGS1 186 aa12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 DDA1Q9BW61 102 aa12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 C1QTNF5Q9BXJ0 243 aa12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 SLC5A7Q9GZV3 580 aa12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 FAM96BQ9Y3D0 163 aa12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 GPR31O00270 319 aa12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 SYNGR1O43759 233 aa12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 CTSDP07339 412 aaPredicted RBP12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 HKR1P10072 659 aa12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 ADCYAP1P18509 176 aa12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 ASCL1P50553 236 aa12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 RBM11P57052 281 aaKnown RBP12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 RAB1AP62820 205 aa12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 LHFPL5Q8TAF8 219 aa12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 ADAMTS17Q8TE56 1095 aa12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 RTN4IP1Q8WWV3 396 aaPredicted RBP12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 BCO1Q9HAY6 547 aa12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 NECAP2Q9NVZ3 263 aa12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 ARHGAP21Q5T5U3 1957 aa12.12□□□□□ -0.47
PCDHGA3-202ENST00000612467 MED19A0JLT2 244 aaPredicted RBP12.11□□□□□ -0.47
PCDHGA3-202ENST00000612467 AGPAT2O15120 278 aa12.11□□□□□ -0.47
PCDHGA3-202ENST00000612467 NME2P22392 152 aa12.11□□□□□ -0.47
PCDHGA3-202ENST00000612467 AADACP22760 399 aa12.11□□□□□ -0.47
PCDHGA3-202ENST00000612467 EIF3IQ13347 325 aaKnown RBP12.11□□□□□ -0.47
PCDHGA3-202ENST00000612467 FAM122CQ6P4D5 195 aa12.11□□□□□ -0.47
PCDHGA3-202ENST00000612467 ASCL4Q6XD76 172 aa12.11□□□□□ -0.47
PCDHGA3-202ENST00000612467 MEX3BQ6ZN04 569 aaKnown RBP12.11□□□□□ -0.47
PCDHGA3-202ENST00000612467 C17orf78Q8N4C9 275 aa12.11□□□□□ -0.47
PCDHGA3-202ENST00000612467 HRH4Q9H3N8 390 aa12.11□□□□□ -0.47
PCDHGA3-202ENST00000612467 PARPBPQ9NWS1 579 aa12.11□□□□□ -0.47
PCDHGA3-202ENST00000612467 C1orf123Q9NWV4 160 aa12.11□□□□□ -0.47
PCDHGA3-202ENST00000612467 ABCD4O14678 606 aa12.11□□□□□ -0.47
PCDHGA3-202ENST00000612467 LRP3O75074 770 aa12.11□□□□□ -0.47
PCDHGA3-202ENST00000612467 FAM157CP0CG43 387 aa12.11□□□□□ -0.47
PCDHGA3-202ENST00000612467 GUCA2BQ16661 112 aa12.11□□□□□ -0.47
PCDHGA3-202ENST00000612467 ABCA11PQ4W5N1 156 aa12.11□□□□□ -0.47
PCDHGA3-202ENST00000612467 EIF4E3Q8N5X7 224 aaKnown RBP12.11□□□□□ -0.47
PCDHGA3-202ENST00000612467 IL22RA1Q8N6P7 574 aa12.11□□□□□ -0.47
PCDHGA3-202ENST00000612467 OR52M1Q8NGK5 317 aa12.11□□□□□ -0.47
PCDHGA3-202ENST00000612467 ERGIC1Q969X5 290 aa12.11□□□□□ -0.47
PCDHGA3-202ENST00000612467 CPNE2Q96FN4 548 aaPredicted RBP12.11□□□□□ -0.47
PCDHGA3-202ENST00000612467 SLC2A9Q9NRM0 540 aa12.11□□□□□ -0.47
PCDHGA3-202ENST00000612467 HSF4Q9ULV5 492 aa12.11□□□□□ -0.47
PCDHGA3-202ENST00000612467 MGAQ8IWI9 3026 aa12.11□□□□□ -0.47
PCDHGA3-202ENST00000612467 KMT2EQ8IZD2 1858 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms