RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 ZNF442Q9H7R0 627 aa14.91□□□□□ -0.02
NEK3-206ENST00000611833 MRPS18CQ9Y3D5 142 aaKnown RBP14.91□□□□□ -0.02
NEK3-206ENST00000611833 PDCD6O75340 191 aa14.9□□□□□ -0.02
NEK3-206ENST00000611833 JTBO76095 146 aa14.9□□□□□ -0.02
NEK3-206ENST00000611833 TMEM33P57088 247 aa14.9□□□□□ -0.02
NEK3-206ENST00000611833 OR8B8Q15620 311 aa14.9□□□□□ -0.02
NEK3-206ENST00000611833 RAB11FIP2Q7L804 512 aa14.9□□□□□ -0.02
NEK3-206ENST00000611833 TECTBQ96PL2 329 aa14.9□□□□□ -0.02
NEK3-206ENST00000611833 CARHSP1Q9Y2V2 147 aaKnown RBP14.9□□□□□ -0.02
NEK3-206ENST00000611833 NOSIPQ9Y314 301 aaKnown RBP14.9□□□□□ -0.02
NEK3-206ENST00000611833 FAM96BQ9Y3D0 163 aa14.9□□□□□ -0.02
NEK3-206ENST00000611833 MRPL33O75394 65 aaKnown RBP14.89□□□□□ -0.03
NEK3-206ENST00000611833 GLI4P10075 376 aa14.89□□□□□ -0.03
NEK3-206ENST00000611833 EDN3P14138 238 aa14.89□□□□□ -0.03
NEK3-206ENST00000611833 GLP1RP43220 463 aa14.89□□□□□ -0.03
NEK3-206ENST00000611833 LPAR6P43657 344 aa14.89□□□□□ -0.03
NEK3-206ENST00000611833 SRYQ05066 204 aa14.89□□□□□ -0.03
NEK3-206ENST00000611833 C10orf91Q5T1B1 145 aa14.89□□□□□ -0.03
NEK3-206ENST00000611833 SPAG16Q8N0X2 631 aa14.89□□□□□ -0.03
NEK3-206ENST00000611833 BATF2Q8N1L9 274 aa14.89□□□□□ -0.03
NEK3-206ENST00000611833 OR5L1Q8NGL2 311 aa14.89□□□□□ -0.03
NEK3-206ENST00000611833 GALNT14Q96FL9 552 aa14.89□□□□□ -0.03
NEK3-206ENST00000611833 SUCNR1Q9BXA5 334 aa14.89□□□□□ -0.03
NEK3-206ENST00000611833 SLC2A9Q9NRM0 540 aa14.89□□□□□ -0.03
NEK3-206ENST00000611833 PARPBPQ9NWS1 579 aa14.89□□□□□ -0.03
NEK3-206ENST00000611833 LRFN1Q9P244 771 aa14.89□□□□□ -0.03
NEK3-206ENST00000611833 BOKQ9UMX3 212 aaPredicted RBP14.89□□□□□ -0.03
NEK3-206ENST00000611833 ZNF587BE7ETH6 402 aa14.89□□□□□ -0.03
NEK3-206ENST00000611833 OR7C1O76099 320 aaPredicted RBP14.89□□□□□ -0.03
NEK3-206ENST00000611833 MMP7P09237 267 aaPredicted RBP14.89□□□□□ -0.03
NEK3-206ENST00000611833 CCNOP22674 350 aa14.89□□□□□ -0.03
NEK3-206ENST00000611833 SULT1A2P50226 295 aa14.89□□□□□ -0.03
NEK3-206ENST00000611833 CAV2P51636 162 aa14.89□□□□□ -0.03
NEK3-206ENST00000611833 RBM11P57052 281 aaKnown RBP14.89□□□□□ -0.03
NEK3-206ENST00000611833 DBX2Q6ZNG2 339 aa14.89□□□□□ -0.03
NEK3-206ENST00000611833 LYZL2Q7Z4W2 148 aa14.89□□□□□ -0.03
NEK3-206ENST00000611833 ZNF611Q8N823 705 aa14.89□□□□□ -0.03
NEK3-206ENST00000611833 CPEB3Q8NE35 698 aaKnown RBP14.89□□□□□ -0.03
NEK3-206ENST00000611833 THOC3Q96J01 351 aaKnown RBP14.89□□□□□ -0.03
NEK3-206ENST00000611833 SYT3Q9BQG1 590 aa14.89□□□□□ -0.03
NEK3-206ENST00000611833 SEC11CQ9BY50 192 aa14.89□□□□□ -0.03
NEK3-206ENST00000611833 PLEKHA2Q9HB19 425 aa14.89□□□□□ -0.03
NEK3-206ENST00000611833 E5RGE8 158 aa14.88□□□□□ -0.03
NEK3-206ENST00000611833 SNAPINO95295 136 aa14.88□□□□□ -0.03
NEK3-206ENST00000611833 F12P00748 615 aaPredicted RBP14.88□□□□□ -0.03
NEK3-206ENST00000611833 MBPP02686 304 aaPredicted RBP14.88□□□□□ -0.03
NEK3-206ENST00000611833 GAPDHP04406 335 aaKnown RBP14.88□□□□□ -0.03
NEK3-206ENST00000611833 FUT3P21217 361 aa14.88□□□□□ -0.03
NEK3-206ENST00000611833 TMEM268Q5VZI3 342 aa14.88□□□□□ -0.03
NEK3-206ENST00000611833 SLC25A26Q70HW3 274 aa14.88□□□□□ -0.03
NEK3-206ENST00000611833 CALHM1Q8IU99 346 aa14.88□□□□□ -0.03
NEK3-206ENST00000611833 C1QTNF5Q9BXJ0 243 aa14.88□□□□□ -0.03
NEK3-206ENST00000611833 AMDHD2Q9Y303 409 aa14.88□□□□□ -0.03
NEK3-206ENST00000611833 NSG2Q9Y328 171 aa14.88□□□□□ -0.03
NEK3-206ENST00000611833 ARID1AO14497 2285 aa14.88□□□□□ -0.03
NEK3-206ENST00000611833 MUC1P15941 1255 aaPredicted RBP14.88□□□□□ -0.03
NEK3-206ENST00000611833 RFC3P40938 356 aa14.88□□□□□ -0.03
NEK3-206ENST00000611833 HERV-K104P61576 105 aa14.88□□□□□ -0.03
NEK3-206ENST00000611833 C9orf135Q5VTT2 229 aa14.88□□□□□ -0.03
NEK3-206ENST00000611833 LIAT1Q6ZQX7 453 aa14.88□□□□□ -0.03
NEK3-206ENST00000611833 TAAR9Q96RI9 348 aa14.88□□□□□ -0.03
NEK3-206ENST00000611833 SPRY4Q9C004 299 aa14.88□□□□□ -0.03
NEK3-206ENST00000611833 PRDM14Q9GZV8 571 aa14.88□□□□□ -0.03
NEK3-206ENST00000611833 TECTAO75443 2155 aa14.87□□□□□ -0.03
NEK3-206ENST00000611833 C9orf172C9J069 976 aa14.87□□□□□ -0.03
NEK3-206ENST00000611833 AGPAT2O15120 278 aa14.87□□□□□ -0.03
NEK3-206ENST00000611833 DIRAS3O95661 229 aa14.87□□□□□ -0.03
NEK3-206ENST00000611833 TMEM211Q6ICI0 200 aa14.87□□□□□ -0.03
NEK3-206ENST00000611833 SPSB4Q96A44 273 aa14.87□□□□□ -0.03
NEK3-206ENST00000611833 TMEM45BQ96B21 275 aa14.87□□□□□ -0.03
NEK3-206ENST00000611833 MOB3AQ96BX8 217 aa14.87□□□□□ -0.03
NEK3-206ENST00000611833 ZPBPQ9BS86 351 aa14.87□□□□□ -0.03
NEK3-206ENST00000611833 STARD10Q9Y365 291 aa14.87□□□□□ -0.03
NEK3-206ENST00000611833 CELSR3Q9NYQ7 3312 aa14.87□□□□□ -0.03
NEK3-206ENST00000611833 NPBWR2P48146 333 aa14.87□□□□□ -0.03
NEK3-206ENST00000611833 ARF1P84077 181 aaKnown RBP14.87□□□□□ -0.03
NEK3-206ENST00000611833 SWI5Q1ZZU3 235 aa14.87□□□□□ -0.03
NEK3-206ENST00000611833 CLEC9AQ6UXN8 241 aa14.87□□□□□ -0.03
NEK3-206ENST00000611833 LGI3Q8N145 548 aa14.87□□□□□ -0.03
NEK3-206ENST00000611833 OR11L1Q8NGX0 322 aa14.87□□□□□ -0.03
NEK3-206ENST00000611833 SIGLEC12Q96PQ1 595 aa14.87□□□□□ -0.03
NEK3-206ENST00000611833 NRIP2Q9BQI9 281 aa14.87□□□□□ -0.03
NEK3-206ENST00000611833 PAPOLGQ9BWT3 736 aaKnown RBP14.87□□□□□ -0.03
NEK3-206ENST00000611833 STRADBQ9C0K7 418 aa14.87□□□□□ -0.03
NEK3-206ENST00000611833 FBXO9Q9UK97 447 aaPredicted RBP14.87□□□□□ -0.03
NEK3-206ENST00000611833 A0A096LPE4 126 aa14.86□□□□□ -0.03
NEK3-206ENST00000611833 A0A1W2PPZ6 126 aa14.86□□□□□ -0.03
NEK3-206ENST00000611833 RNASEK-C17orf49H0YIS7 233 aa14.86□□□□□ -0.03
NEK3-206ENST00000611833 H7C2Y5 167 aa14.86□□□□□ -0.03
NEK3-206ENST00000611833 PHF1O43189 567 aaPredicted RBP14.86□□□□□ -0.03
NEK3-206ENST00000611833 NEURL1O76050 574 aa14.86□□□□□ -0.03
NEK3-206ENST00000611833 CELA3AP09093 270 aa14.86□□□□□ -0.03
NEK3-206ENST00000611833 JMJD7P0C870 316 aa14.86□□□□□ -0.03
NEK3-206ENST00000611833 AADACP22760 399 aa14.86□□□□□ -0.03
NEK3-206ENST00000611833 CBLN2Q8IUK8 224 aa14.86□□□□□ -0.03
NEK3-206ENST00000611833 LRTM2Q8N967 370 aa14.86□□□□□ -0.03
NEK3-206ENST00000611833 CCDC71LQ8N9Z2 235 aa14.86□□□□□ -0.03
NEK3-206ENST00000611833 C18orf12Q96KH6 178 aa14.86□□□□□ -0.03
NEK3-206ENST00000611833 PARP11Q9NR21 331 aa14.86□□□□□ -0.03
NEK3-206ENST00000611833 SLC7A10Q9NS82 523 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms