RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 CAB39Q9Y376 341 aaPredicted RBP15.74■□□□□ 0.11
SGMS1-208ENST00000608287 HSPE1-MOB4S4R3N1 261 aa15.74■□□□□ 0.11
SGMS1-208ENST00000608287 CENPVL3A0A0U1RRI6 287 aa15.73■□□□□ 0.11
SGMS1-208ENST00000608287 A0A1W2PQ09 198 aa15.73■□□□□ 0.11
SGMS1-208ENST00000608287 XPNPEP2O43895 674 aa15.73■□□□□ 0.11
SGMS1-208ENST00000608287 RPSAP08865 295 aaKnown RBP15.73■□□□□ 0.11
SGMS1-208ENST00000608287 MYL12AP19105 171 aa15.73■□□□□ 0.11
SGMS1-208ENST00000608287 GTF2A1P52655 376 aaPredicted RBP15.73■□□□□ 0.11
SGMS1-208ENST00000608287 MTCP1P56278 107 aa15.73■□□□□ 0.11
SGMS1-208ENST00000608287 ERVK11-1P61568 191 aa15.73■□□□□ 0.11
SGMS1-208ENST00000608287 SLC34A1Q06495 639 aa15.73■□□□□ 0.11
SGMS1-208ENST00000608287 LHFPL2Q6ZUX7 228 aa15.73■□□□□ 0.11
SGMS1-208ENST00000608287 VMO1Q7Z5L0 202 aa15.73■□□□□ 0.11
SGMS1-208ENST00000608287 LDLRAD3Q86YD5 345 aa15.73■□□□□ 0.11
SGMS1-208ENST00000608287 ZNF561Q8N587 486 aa15.73■□□□□ 0.11
SGMS1-208ENST00000608287 OR13C9Q8NGT0 318 aa15.73■□□□□ 0.11
SGMS1-208ENST00000608287 C8orf46Q8TAG6 207 aa15.73■□□□□ 0.11
SGMS1-208ENST00000608287 TSEN15Q8WW01 171 aaKnown RBP15.73■□□□□ 0.11
SGMS1-208ENST00000608287 DMRTB1Q96MA1 342 aa15.73■□□□□ 0.11
SGMS1-208ENST00000608287 DIMT1Q9UNQ2 313 aaKnown RBP15.73■□□□□ 0.11
SGMS1-208ENST00000608287 EXOSC1Q9Y3B2 195 aaKnown RBP15.73■□□□□ 0.11
SGMS1-208ENST00000608287 F8VVB4 439 aa15.72■□□□□ 0.11
SGMS1-208ENST00000608287 F8VWA3 439 aa15.72■□□□□ 0.11
SGMS1-208ENST00000608287 CYB5AP00167 134 aa15.72■□□□□ 0.11
SGMS1-208ENST00000608287 PRB2P02812 416 aaPredicted RBP15.72■□□□□ 0.11
SGMS1-208ENST00000608287 POU3F4P49335 361 aa15.72■□□□□ 0.11
SGMS1-208ENST00000608287 MED21Q13503 144 aa15.72■□□□□ 0.11
SGMS1-208ENST00000608287 OR2G6Q5TZ20 316 aa15.72■□□□□ 0.11
SGMS1-208ENST00000608287 PDZD9Q8IXQ8 264 aa15.72■□□□□ 0.11
SGMS1-208ENST00000608287 MKXQ8IYA7 352 aa15.72■□□□□ 0.11
SGMS1-208ENST00000608287 RFT1Q96AA3 541 aa15.72■□□□□ 0.11
SGMS1-208ENST00000608287 SPSB1Q96BD6 273 aa15.72■□□□□ 0.11
SGMS1-208ENST00000608287 TMEM80Q96HE8 168 aa15.72■□□□□ 0.11
SGMS1-208ENST00000608287 OPALINQ96PE5 141 aa15.72■□□□□ 0.11
SGMS1-208ENST00000608287 CHCHD3Q9NX63 227 aaKnown RBP15.72■□□□□ 0.11
SGMS1-208ENST00000608287 DHDHQ9UQ10 334 aa15.72■□□□□ 0.11
SGMS1-208ENST00000608287 XAF1Q6GPH4 301 aa15.71■□□□□ 0.11
SGMS1-208ENST00000608287 RPL22L1Q6P5R6 122 aaKnown RBP15.71■□□□□ 0.11
SGMS1-208ENST00000608287 C11orf88Q6PI97 169 aa15.71■□□□□ 0.11
SGMS1-208ENST00000608287 Q6ZSV7 163 aa15.71■□□□□ 0.11
SGMS1-208ENST00000608287 FAM185AQ8N0U4 392 aa15.71■□□□□ 0.11
SGMS1-208ENST00000608287 GGHQ92820 318 aa15.71■□□□□ 0.11
SGMS1-208ENST00000608287 EMG1Q92979 244 aaKnown RBP15.71■□□□□ 0.11
SGMS1-208ENST00000608287 ZCCHC4Q9H5U6 513 aa15.71■□□□□ 0.11
SGMS1-208ENST00000608287 NEK6Q9HC98 313 aa15.71■□□□□ 0.11
SGMS1-208ENST00000608287 SIRT7Q9NRC8 400 aa15.71■□□□□ 0.11
SGMS1-208ENST00000608287 CLEC2DQ9UHP7 191 aa15.71■□□□□ 0.11
SGMS1-208ENST00000608287 TRBV23-1A0A0A0MS06 115 aa15.7■□□□□ 0.1
SGMS1-208ENST00000608287 IGHV1-69DA0A0B4J2H0 117 aa15.7■□□□□ 0.1
SGMS1-208ENST00000608287 IGHV1-69P01742 117 aa15.7■□□□□ 0.1
SGMS1-208ENST00000608287 IER3P46695 156 aa15.7■□□□□ 0.1
SGMS1-208ENST00000608287 ST3GAL4Q11206 333 aa15.7■□□□□ 0.1
SGMS1-208ENST00000608287 HERPUD1Q15011 391 aa15.7■□□□□ 0.1
SGMS1-208ENST00000608287 CCDC58Q4VC31 144 aa15.7■□□□□ 0.1
SGMS1-208ENST00000608287 SERPINA12Q8IW75 414 aa15.7■□□□□ 0.1
SGMS1-208ENST00000608287 OR5D14Q8NGL3 314 aa15.7■□□□□ 0.1
SGMS1-208ENST00000608287 SGCDQ92629 289 aa15.7■□□□□ 0.1
SGMS1-208ENST00000608287 SPACA5Q96QH8 159 aa15.7■□□□□ 0.1
SGMS1-208ENST00000608287 EFCAB10A6NFE3 127 aa15.69■□□□□ 0.1
SGMS1-208ENST00000608287 TSPAN9O75954 239 aa15.69■□□□□ 0.1
SGMS1-208ENST00000608287 MT-ND2P03891 347 aa15.69■□□□□ 0.1
SGMS1-208ENST00000608287 HCKP08631 526 aa15.69■□□□□ 0.1
SGMS1-208ENST00000608287 BCL3P20749 454 aa15.69■□□□□ 0.1
SGMS1-208ENST00000608287 TGFBR2P37173 567 aa15.69■□□□□ 0.1
SGMS1-208ENST00000608287 NPBWR2P48146 333 aa15.69■□□□□ 0.1
SGMS1-208ENST00000608287 SOX2P48431 317 aa15.69■□□□□ 0.1
SGMS1-208ENST00000608287 COL10A1Q03692 680 aa15.69■□□□□ 0.1
SGMS1-208ENST00000608287 PRB3Q04118 309 aaPredicted RBP15.69■□□□□ 0.1
SGMS1-208ENST00000608287 PDZK1IP1Q13113 114 aa15.69■□□□□ 0.1
SGMS1-208ENST00000608287 BLMHQ13867 455 aa15.69■□□□□ 0.1
SGMS1-208ENST00000608287 CDK5R1Q15078 307 aa15.69■□□□□ 0.1
SGMS1-208ENST00000608287 LAIR2Q6ISS4 152 aa15.69■□□□□ 0.1
SGMS1-208ENST00000608287 Q8IYB0 196 aa15.69■□□□□ 0.1
SGMS1-208ENST00000608287 PARP16Q8N5Y8 322 aa15.69■□□□□ 0.1
SGMS1-208ENST00000608287 Q8N7P7 452 aa15.69■□□□□ 0.1
SGMS1-208ENST00000608287 ASCC1Q8N9N2 400 aaKnown RBP15.69■□□□□ 0.1
SGMS1-208ENST00000608287 BPIFB6Q8NFQ5 453 aa15.69■□□□□ 0.1
SGMS1-208ENST00000608287 TFAP2CQ92754 450 aa15.69■□□□□ 0.1
SGMS1-208ENST00000608287 C19orf12Q9NSK7 152 aa15.69■□□□□ 0.1
SGMS1-208ENST00000608287 RBFOX1Q9NWB1 397 aaKnown RBP15.69■□□□□ 0.1
SGMS1-208ENST00000608287 BABAM2Q9NXR7 383 aa15.69■□□□□ 0.1
SGMS1-208ENST00000608287 M0R1W7 72 aa15.68■□□□□ 0.1
SGMS1-208ENST00000608287 SULT1B1O43704 296 aa15.68■□□□□ 0.1
SGMS1-208ENST00000608287 IGHV4-59P01825 116 aa15.68■□□□□ 0.1
SGMS1-208ENST00000608287 TK1P04183 234 aa15.68■□□□□ 0.1
SGMS1-208ENST00000608287 CHRM2P08172 466 aa15.68■□□□□ 0.1
SGMS1-208ENST00000608287 PIPP12273 146 aaPredicted RBP15.68■□□□□ 0.1
SGMS1-208ENST00000608287 DLX1P56177 255 aa15.68■□□□□ 0.1
SGMS1-208ENST00000608287 RPL31P62899 125 aaKnown RBP15.68■□□□□ 0.1
SGMS1-208ENST00000608287 STX19Q8N4C7 294 aa15.68■□□□□ 0.1
SGMS1-208ENST00000608287 OR4M1Q8NGD0 313 aa15.68■□□□□ 0.1
SGMS1-208ENST00000608287 OR5D18Q8NGL1 313 aa15.68■□□□□ 0.1
SGMS1-208ENST00000608287 OR52N1Q8NH53 320 aa15.68■□□□□ 0.1
SGMS1-208ENST00000608287 GPR148Q8TDV2 347 aa15.68■□□□□ 0.1
SGMS1-208ENST00000608287 NRG4Q8WWG1 115 aa15.68■□□□□ 0.1
SGMS1-208ENST00000608287 RGP1Q92546 391 aaPredicted RBP15.68■□□□□ 0.1
SGMS1-208ENST00000608287 CNOT2Q9NZN8 540 aaKnown RBP15.68■□□□□ 0.1
SGMS1-208ENST00000608287 IL36RNQ9UBH0 155 aa15.68■□□□□ 0.1
SGMS1-208ENST00000608287 FAM96BQ9Y3D0 163 aa15.68■□□□□ 0.1
SGMS1-208ENST00000608287 RYR3Q15413 4870 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms