RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 SEMG1P04279 462 aa12.07□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 IL24Q13007 206 aa12.07□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 KPNB1Q14974 876 aaKnown RBP12.07□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 BAIAP2L2Q6UXY1 529 aa12.07□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 HEPN1Q6WQI6 88 aa12.07□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 EGFL6Q8IUX8 553 aa12.07□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 TOMM40LQ969M1 308 aa12.07□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 RPEQ96AT9 228 aa12.07□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 CEP19Q96LK0 163 aa12.07□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 EFCAB1Q9HAE3 211 aa12.07□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 FAM206AQ9NX38 181 aa12.07□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 LAMP5Q9UJQ1 280 aa12.07□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 AP4M1O00189 453 aa12.06□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 CCRL2O00421 344 aa12.06□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 KRT36O76013 467 aa12.06□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 HAND1O96004 215 aa12.06□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 IGHA1P01876 353 aa12.06□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 COX4I1P13073 169 aa12.06□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 GPR50Q13585 617 aa12.06□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 HNF4GQ14541 408 aa12.06□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 OR52N4Q8NGI2 321 aa12.06□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 OR56B4Q8NH76 319 aa12.06□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 HRASLS5Q96KN8 279 aa12.06□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 TEAD3Q99594 435 aa12.06□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 EDA2RQ9HAV5 297 aa12.06□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 ZNF286AQ9HBT8 521 aa12.06□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 DNAJB9Q9UBS3 223 aa12.06□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 FAM230AA0A1W2PPH8 454 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 FAM90A18PA6NE21 464 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 FAM90A16PA6NEW6 464 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 FAM90A20PA6NIJ5 464 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 FAM90A9PA6NNJ1 464 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 FAM90A12PA8MX19 464 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 FAM90A5PA8MXJ8 464 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 TNFRSF11BO00300 401 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 MGST3O14880 152 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 SASH3O75995 380 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 HCKP08631 526 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 FAM90A15PP0C7V4 464 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 FAM90A13PP0C7W8 464 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 FAM90A14PP0C7W9 464 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 FAM90A24PP0C7X0 464 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 ERP29P30040 261 aaKnown RBP12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 P2RX3P56373 397 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 C8orf82Q6P1X6 216 aaPredicted RBP12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 ZNF429Q86V71 674 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 ENTHD1Q8IYW4 607 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 AQP11Q8NBQ7 271 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 OR11H1Q8NG94 326 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 OR4D6Q8NGJ1 314 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 C4orf3Q8WVX3 66 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 EMG1Q92979 244 aaKnown RBP12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 SLAMF9Q96A28 289 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 TM2D3Q9BRN9 247 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 MROQ9BYG7 248 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 CCDC134Q9H6E4 229 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 GORASP2Q9H8Y8 452 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 MTCH1Q9NZJ7 389 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 ABCD2Q9UBJ2 740 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 GTF2A1LQ9UNN4 478 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 SLC7A11Q9UPY5 501 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 KLHDC2Q9Y2U9 406 aa12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 AMMECR1Q9Y4X0 333 aaPredicted RBP12.05□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 FUOMA2VDF0 154 aa12.04□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 F8VVB4 439 aa12.04□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 F8VWA3 439 aa12.04□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 LY6LH3BQJ8 138 aa12.04□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 LDLRAD4O15165 306 aa12.04□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 CCNB2O95067 398 aa12.04□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 IGLV3-1P01715 115 aa12.04□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 ELANEP08246 267 aa12.04□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 CD34P28906 385 aa12.04□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 VEGFCP49767 419 aa12.04□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 FOXE3Q13461 319 aa12.04□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 ZNF829Q3KNS6 432 aaPredicted RBP12.04□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 TMEM42Q69YG0 159 aa12.04□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 RNF148Q8N7C7 305 aa12.04□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 TEX47Q8TBZ9 253 aa12.04□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 TAS2R3Q9NYW6 316 aa12.04□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 STARD9Q9P2P6 4700 aa12.03□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 RBMY1BA6NDE4 496 aaKnown RBP12.03□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 RBMY1EA6NEQ0 496 aaKnown RBP12.03□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 A6NIN4 97 aa12.03□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 PRR23D1E9PI22 279 aaPredicted RBP12.03□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 RRP9O43818 475 aaKnown RBP12.03□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 PSPNO60542 156 aa12.03□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 OR8U8P0C7N1 319 aa12.03□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 RBMY1DP0C7P1 496 aaKnown RBP12.03□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 PRR23D2P0DMB1 279 aaPredicted RBP12.03□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 PSME3P61289 254 aa12.03□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 RPS7P62081 194 aaKnown RBP12.03□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 FHL3Q13643 280 aa12.03□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 DEGS2Q6QHC5 323 aa12.03□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 C16orf89Q6UX73 402 aa12.03□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 HACD2Q6Y1H2 254 aa12.03□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 CADM1Q9BY67 442 aaKnown RBP12.03□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 SPAG4Q9NPE6 437 aa12.03□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 ISYNA1Q9NPH2 558 aa12.03□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 NUFIP1Q9UHK0 495 aaKnown RBP12.03□□□□□ -0.48
NEDD8-MDP1-204ENST00000605847 U3KQV3 271 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms