RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 OR2T6Q8NHC8 308 aa11.87□□□□□ -0.51
IRF3-223ENST00000599223 ZNF671Q8TAW3 534 aa11.87□□□□□ -0.51
IRF3-223ENST00000599223 TMEM80Q96HE8 168 aa11.87□□□□□ -0.51
IRF3-223ENST00000599223 FAM234AQ9H0X4 552 aa11.87□□□□□ -0.51
IRF3-223ENST00000599223 HES4Q9HCC6 221 aa11.87□□□□□ -0.51
IRF3-223ENST00000599223 GPR173Q9NS66 373 aa11.87□□□□□ -0.51
IRF3-223ENST00000599223 SERTAD4Q9NUC0 356 aa11.87□□□□□ -0.51
IRF3-223ENST00000599223 ENPP5Q9UJA9 477 aa11.87□□□□□ -0.51
IRF3-223ENST00000599223 PQLC2LA1A4F0 135 aa11.86□□□□□ -0.51
IRF3-223ENST00000599223 A6NIN4 97 aa11.86□□□□□ -0.51
IRF3-223ENST00000599223 ACOD1A6NK06 481 aa11.86□□□□□ -0.51
IRF3-223ENST00000599223 ADARB2-AS1A8MUL3 147 aa11.86□□□□□ -0.51
IRF3-223ENST00000599223 DHRS3O75911 302 aa11.86□□□□□ -0.51
IRF3-223ENST00000599223 FADS2O95864 444 aaKnown RBP11.86□□□□□ -0.51
IRF3-223ENST00000599223 NRASP01111 189 aa11.86□□□□□ -0.51
IRF3-223ENST00000599223 MT-ND2P03891 347 aa11.86□□□□□ -0.51
IRF3-223ENST00000599223 PRDX2P32119 198 aa11.86□□□□□ -0.51
IRF3-223ENST00000599223 RAB13P51153 203 aa11.86□□□□□ -0.51
IRF3-223ENST00000599223 EFNB1P98172 346 aa11.86□□□□□ -0.51
IRF3-223ENST00000599223 RAB40BQ12829 278 aa11.86□□□□□ -0.51
IRF3-223ENST00000599223 ZBTB37Q5TC79 503 aa11.86□□□□□ -0.51
IRF3-223ENST00000599223 LCN1P1Q5VSP4 162 aa11.86□□□□□ -0.51
IRF3-223ENST00000599223 C11orf88Q6PI97 169 aa11.86□□□□□ -0.51
IRF3-223ENST00000599223 DEGS2Q6QHC5 323 aa11.86□□□□□ -0.51
IRF3-223ENST00000599223 TMEM219Q86XT9 240 aa11.86□□□□□ -0.51
IRF3-223ENST00000599223 CALHM1Q8IU99 346 aa11.86□□□□□ -0.51
IRF3-223ENST00000599223 ZNF679Q8IYX0 411 aa11.86□□□□□ -0.51
IRF3-223ENST00000599223 ZNF561Q8N587 486 aa11.86□□□□□ -0.51
IRF3-223ENST00000599223 WIPF2Q8TF74 440 aaPredicted RBP11.86□□□□□ -0.51
IRF3-223ENST00000599223 RNFT2Q96EX2 444 aa11.86□□□□□ -0.51
IRF3-223ENST00000599223 NKX3-1Q99801 234 aaPredicted RBP11.86□□□□□ -0.51
IRF3-223ENST00000599223 MROQ9BYG7 248 aa11.86□□□□□ -0.51
IRF3-223ENST00000599223 NPFFR1Q9GZQ6 430 aa11.86□□□□□ -0.51
IRF3-223ENST00000599223 FKBP14Q9NWM8 211 aa11.86□□□□□ -0.51
IRF3-223ENST00000599223 PAK1IP1Q9NWT1 392 aaPredicted RBP11.86□□□□□ -0.51
IRF3-223ENST00000599223 RASL12Q9NYN1 266 aa11.86□□□□□ -0.51
IRF3-223ENST00000599223 WARS2Q9UGM6 360 aaKnown RBP11.86□□□□□ -0.51
IRF3-223ENST00000599223 ERGIC3Q9Y282 383 aa11.86□□□□□ -0.51
IRF3-223ENST00000599223 A0A1B0GTI1 187 aa11.85□□□□□ -0.51
IRF3-223ENST00000599223 FAM90A8PA6NJQ4 464 aa11.85□□□□□ -0.51
IRF3-223ENST00000599223 VGLL3A8MV65 326 aa11.85□□□□□ -0.51
IRF3-223ENST00000599223 ODF3BA8MYP8 253 aa11.85□□□□□ -0.51
IRF3-223ENST00000599223 F8VVB4 439 aa11.85□□□□□ -0.51
IRF3-223ENST00000599223 F8VWA3 439 aa11.85□□□□□ -0.51
IRF3-223ENST00000599223 NXPH2O95156 264 aa11.85□□□□□ -0.51
IRF3-223ENST00000599223 CD28P10747 220 aa11.85□□□□□ -0.51
IRF3-223ENST00000599223 HTR1FP30939 366 aa11.85□□□□□ -0.51
IRF3-223ENST00000599223 TBCEQ15813 527 aaPredicted RBP11.85□□□□□ -0.51
IRF3-223ENST00000599223 FAM189A2Q15884 450 aa11.85□□□□□ -0.51
IRF3-223ENST00000599223 ZNF829Q3KNS6 432 aaPredicted RBP11.85□□□□□ -0.51
IRF3-223ENST00000599223 ZNF684Q5T5D7 378 aa11.85□□□□□ -0.51
IRF3-223ENST00000599223 KCTD18Q6PI47 426 aaPredicted RBP11.85□□□□□ -0.51
IRF3-223ENST00000599223 Q8N2B8 174 aa11.85□□□□□ -0.51
IRF3-223ENST00000599223 OR2T27Q8NH04 317 aa11.85□□□□□ -0.51
IRF3-223ENST00000599223 DGCR14Q96DF8 476 aaKnown RBP11.85□□□□□ -0.51
IRF3-223ENST00000599223 MYCBPQ99417 103 aaPredicted RBP11.85□□□□□ -0.51
IRF3-223ENST00000599223 CNN2Q99439 309 aaKnown RBP11.85□□□□□ -0.51
IRF3-223ENST00000599223 RAB18Q9NP72 206 aa11.85□□□□□ -0.51
IRF3-223ENST00000599223 OR14J1Q9UGF5 321 aa11.85□□□□□ -0.51
IRF3-223ENST00000599223 IKZF2Q9UKS7 526 aa11.85□□□□□ -0.51
IRF3-223ENST00000599223 GTF2A1LQ9UNN4 478 aa11.85□□□□□ -0.51
IRF3-223ENST00000599223 TCF19Q9Y242 345 aa11.85□□□□□ -0.51
IRF3-223ENST00000599223 MYL12BO14950 172 aa11.84□□□□□ -0.51
IRF3-223ENST00000599223 NOS1APO75052 506 aaPredicted RBP11.84□□□□□ -0.51
IRF3-223ENST00000599223 ZNF254O75437 659 aa11.84□□□□□ -0.51
IRF3-223ENST00000599223 TK1P04183 234 aa11.84□□□□□ -0.51
IRF3-223ENST00000599223 HTR1AP08908 422 aa11.84□□□□□ -0.51
IRF3-223ENST00000599223 MPZP25189 248 aa11.84□□□□□ -0.51
IRF3-223ENST00000599223 DCKP27707 260 aa11.84□□□□□ -0.51
IRF3-223ENST00000599223 PSMB9P28065 219 aa11.84□□□□□ -0.51
IRF3-223ENST00000599223 RIDAP52758 137 aaKnown RBP11.84□□□□□ -0.51
IRF3-223ENST00000599223 ERVK11-1P61568 191 aa11.84□□□□□ -0.51
IRF3-223ENST00000599223 EMX1Q04741 257 aaPredicted RBP11.84□□□□□ -0.51
IRF3-223ENST00000599223 NSUN5P1Q3KNT7 163 aa11.84□□□□□ -0.51
IRF3-223ENST00000599223 TMEM95Q3KNT9 176 aa11.84□□□□□ -0.51
IRF3-223ENST00000599223 FBLN7Q53RD9 439 aa11.84□□□□□ -0.51
IRF3-223ENST00000599223 OXLD1Q5BKU9 147 aa11.84□□□□□ -0.51
IRF3-223ENST00000599223 AADACL4Q5VUY2 407 aa11.84□□□□□ -0.51
IRF3-223ENST00000599223 LIAT1Q6ZQX7 453 aa11.84□□□□□ -0.51
IRF3-223ENST00000599223 Q6ZS46 218 aa11.84□□□□□ -0.51
IRF3-223ENST00000599223 MEPCEQ7L2J0 689 aaKnown RBP11.84□□□□□ -0.51
IRF3-223ENST00000599223 ANGPTL5Q86XS5 388 aa11.84□□□□□ -0.51
IRF3-223ENST00000599223 OR14K1Q8NGZ2 314 aa11.84□□□□□ -0.51
IRF3-223ENST00000599223 MUL1Q969V5 352 aa11.84□□□□□ -0.51
IRF3-223ENST00000599223 MND1Q9BWT6 205 aa11.84□□□□□ -0.51
IRF3-223ENST00000599223 CDCA4Q9BXL8 241 aa11.84□□□□□ -0.51
IRF3-223ENST00000599223 MMP28Q9H239 520 aa11.84□□□□□ -0.51
IRF3-223ENST00000599223 HEXA-AS1Q9H8Q6 139 aa11.84□□□□□ -0.51
IRF3-223ENST00000599223 ADGRL4Q9HBW9 690 aa11.84□□□□□ -0.51
IRF3-223ENST00000599223 ACOT13Q9NPJ3 140 aa11.84□□□□□ -0.51
IRF3-223ENST00000599223 EXOSC1Q9Y3B2 195 aaKnown RBP11.84□□□□□ -0.51
IRF3-223ENST00000599223 V9GYS6 101 aa11.84□□□□□ -0.51
IRF3-223ENST00000599223 A6NDX4 124 aa11.83□□□□□ -0.52
IRF3-223ENST00000599223 C17orf98A8MV24 154 aa11.83□□□□□ -0.52
IRF3-223ENST00000599223 LOC110117498-PIK3R3F6TDL0 507 aa11.83□□□□□ -0.52
IRF3-223ENST00000599223 H3BSH0 61 aa11.83□□□□□ -0.52
IRF3-223ENST00000599223 ZNF737O75373 536 aa11.83□□□□□ -0.52
IRF3-223ENST00000599223 FBXO24O75426 580 aa11.83□□□□□ -0.52
IRF3-223ENST00000599223 CLVS2Q5SYC1 327 aa11.83□□□□□ -0.52
IRF3-223ENST00000599223 BCL2L15Q5TBC7 163 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms