RNA–Protein interactions for RNA: ENST00000597968.1

TRIM28-211, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-211ENST00000597968 A0A1W2PQL4 384 aaPredicted RBP10.97□□□□□ -0.65
TRIM28-211ENST00000597968 SAC3D1A6NKF1 404 aa10.97□□□□□ -0.65
TRIM28-211ENST00000597968 FAM90A22PA8MWA6 464 aa10.97□□□□□ -0.65
TRIM28-211ENST00000597968 G3V4G9 280 aa10.97□□□□□ -0.65
TRIM28-211ENST00000597968 H3BSH0 61 aa10.97□□□□□ -0.65
TRIM28-211ENST00000597968 ATP5HO75947 161 aa10.97□□□□□ -0.65
TRIM28-211ENST00000597968 RPP14O95059 124 aaKnown RBP10.97□□□□□ -0.65
TRIM28-211ENST00000597968 HAND1O96004 215 aa10.97□□□□□ -0.65
TRIM28-211ENST00000597968 PIPP12273 146 aaPredicted RBP10.97□□□□□ -0.65
TRIM28-211ENST00000597968 ATP6V1E1P36543 226 aa10.97□□□□□ -0.65
TRIM28-211ENST00000597968 ISL1P61371 349 aa10.97□□□□□ -0.65
TRIM28-211ENST00000597968 ACTA2P62736 377 aa10.97□□□□□ -0.65
TRIM28-211ENST00000597968 ACTG2P63267 376 aa10.97□□□□□ -0.65
TRIM28-211ENST00000597968 ACTC1P68032 377 aa10.97□□□□□ -0.65
TRIM28-211ENST00000597968 ACTA1P68133 377 aa10.97□□□□□ -0.65
TRIM28-211ENST00000597968 ZNF91Q05481 1191 aa10.97□□□□□ -0.65
TRIM28-211ENST00000597968 LHFPL2Q6ZUX7 228 aa10.97□□□□□ -0.65
TRIM28-211ENST00000597968 SLC25A26Q70HW3 274 aa10.97□□□□□ -0.65
TRIM28-211ENST00000597968 SSX6Q7RTT6 188 aa10.97□□□□□ -0.65
TRIM28-211ENST00000597968 C1QL4Q86Z23 238 aa10.97□□□□□ -0.65
TRIM28-211ENST00000597968 ZNF676Q8N7Q3 588 aa10.97□□□□□ -0.65
TRIM28-211ENST00000597968 TRMT10AQ8TBZ6 339 aaKnown RBP10.97□□□□□ -0.65
TRIM28-211ENST00000597968 ZNF596Q8TC21 504 aa10.97□□□□□ -0.65
TRIM28-211ENST00000597968 EMG1Q92979 244 aaKnown RBP10.97□□□□□ -0.65
TRIM28-211ENST00000597968 TBX5Q99593 518 aa10.97□□□□□ -0.65
TRIM28-211ENST00000597968 NKX3-1Q99801 234 aaPredicted RBP10.97□□□□□ -0.65
TRIM28-211ENST00000597968 CLEC7AQ9BXN2 247 aa10.97□□□□□ -0.65
TRIM28-211ENST00000597968 GABARAPL3Q9BY60 117 aa10.97□□□□□ -0.65
TRIM28-211ENST00000597968 TMEM133Q9H2Q1 129 aa10.97□□□□□ -0.65
TRIM28-211ENST00000597968 GAL3ST2Q9H3Q3 398 aa10.97□□□□□ -0.65
TRIM28-211ENST00000597968 NEK6Q9HC98 313 aa10.97□□□□□ -0.65
TRIM28-211ENST00000597968 PCDHGB5Q9Y5G0 923 aa10.97□□□□□ -0.65
TRIM28-211ENST00000597968 IGKV1-27A0A075B6S5 117 aa10.96□□□□□ -0.65
TRIM28-211ENST00000597968 IGHV2-26A0A0B4J1V2 119 aa10.96□□□□□ -0.65
TRIM28-211ENST00000597968 F2RL2O00254 374 aa10.96□□□□□ -0.65
TRIM28-211ENST00000597968 HTR1DP28221 377 aa10.96□□□□□ -0.65
TRIM28-211ENST00000597968 DYNC1I2Q13409 638 aaKnown RBP10.96□□□□□ -0.65
TRIM28-211ENST00000597968 GRK1Q15835 563 aa10.96□□□□□ -0.65
TRIM28-211ENST00000597968 SLC25A30Q5SVS4 291 aa10.96□□□□□ -0.65
TRIM28-211ENST00000597968 FDX2Q6P4F2 183 aa10.96□□□□□ -0.65
TRIM28-211ENST00000597968 CCBE1Q6UXH8 406 aaPredicted RBP10.96□□□□□ -0.65
TRIM28-211ENST00000597968 FAM58AQ8N1B3 248 aa10.96□□□□□ -0.65
TRIM28-211ENST00000597968 BATF2Q8N1L9 274 aa10.96□□□□□ -0.65
TRIM28-211ENST00000597968 DYNAPQ8N1N2 210 aa10.96□□□□□ -0.65
TRIM28-211ENST00000597968 CORO2AQ92828 525 aa10.96□□□□□ -0.65
TRIM28-211ENST00000597968 RIBC2Q9H4K1 309 aa10.96□□□□□ -0.65
TRIM28-211ENST00000597968 LIN7BQ9HAP6 207 aa10.96□□□□□ -0.65
TRIM28-211ENST00000597968 TAS2R3Q9NYW6 316 aa10.96□□□□□ -0.65
TRIM28-211ENST00000597968 OAZ3Q9UMX2 235 aa10.96□□□□□ -0.65
TRIM28-211ENST00000597968 LOC107986453A0A1B0GWG9 222 aa10.95□□□□□ -0.66
TRIM28-211ENST00000597968 TMEM82A0PJX8 343 aa10.95□□□□□ -0.66
TRIM28-211ENST00000597968 F8VVB4 439 aa10.95□□□□□ -0.66
TRIM28-211ENST00000597968 F8VWA3 439 aa10.95□□□□□ -0.66
TRIM28-211ENST00000597968 MT-ND2P03891 347 aa10.95□□□□□ -0.66
TRIM28-211ENST00000597968 CSN2P05814 226 aa10.95□□□□□ -0.66
TRIM28-211ENST00000597968 LMO1P25800 156 aa10.95□□□□□ -0.66
TRIM28-211ENST00000597968 BRS3P32247 399 aa10.95□□□□□ -0.66
TRIM28-211ENST00000597968 CCR9P51686 369 aa10.95□□□□□ -0.66
TRIM28-211ENST00000597968 BDH1Q02338 343 aa10.95□□□□□ -0.66
TRIM28-211ENST00000597968 ODF4Q2M2E3 257 aa10.95□□□□□ -0.66
TRIM28-211ENST00000597968 MEDAGQ5VYS4 303 aa10.95□□□□□ -0.66
TRIM28-211ENST00000597968 HEPN1Q6WQI6 88 aa10.95□□□□□ -0.66
TRIM28-211ENST00000597968 TCF23Q7RTU1 214 aa10.95□□□□□ -0.66
TRIM28-211ENST00000597968 SAXO1Q8IYX7 474 aa10.95□□□□□ -0.66
TRIM28-211ENST00000597968 PRSS35Q8N3Z0 413 aa10.95□□□□□ -0.66
TRIM28-211ENST00000597968 C11orf44Q8N8P7 122 aa10.95□□□□□ -0.66
TRIM28-211ENST00000597968 WFDC9Q8NEX5 89 aa10.95□□□□□ -0.66
TRIM28-211ENST00000597968 OR10H4Q8NGA5 316 aa10.95□□□□□ -0.66
TRIM28-211ENST00000597968 PYDC1Q8WXC3 89 aa10.95□□□□□ -0.66
TRIM28-211ENST00000597968 SLAMF9Q96A28 289 aa10.95□□□□□ -0.66
TRIM28-211ENST00000597968 MRPL48Q96GC5 212 aaKnown RBP10.95□□□□□ -0.66
TRIM28-211ENST00000597968 MBOAT4Q96T53 435 aa10.95□□□□□ -0.66
TRIM28-211ENST00000597968 NECAP2Q9NVZ3 263 aa10.95□□□□□ -0.66
TRIM28-211ENST00000597968 DPM3Q9P2X0 92 aa10.95□□□□□ -0.66
TRIM28-211ENST00000597968 TRGV10A0A0A0MS01 117 aa10.94□□□□□ -0.66
TRIM28-211ENST00000597968 SNTNA6NMZ2 147 aa10.94□□□□□ -0.66
TRIM28-211ENST00000597968 OOSP1A8MZH6 123 aa10.94□□□□□ -0.66
TRIM28-211ENST00000597968 M0QZK8 103 aa10.94□□□□□ -0.66
TRIM28-211ENST00000597968 SH2D1BO14796 132 aa10.94□□□□□ -0.66
TRIM28-211ENST00000597968 ENTPD6O75354 484 aa10.94□□□□□ -0.66
TRIM28-211ENST00000597968 ALX3O95076 343 aa10.94□□□□□ -0.66
TRIM28-211ENST00000597968 GABRR1P24046 479 aa10.94□□□□□ -0.66
TRIM28-211ENST00000597968 PAX6P26367 422 aa10.94□□□□□ -0.66
TRIM28-211ENST00000597968 CD34P28906 385 aa10.94□□□□□ -0.66
TRIM28-211ENST00000597968 CEACAM3P40198 252 aa10.94□□□□□ -0.66
TRIM28-211ENST00000597968 VDAC2P45880 294 aaPredicted RBP10.94□□□□□ -0.66
TRIM28-211ENST00000597968 RAB13P51153 203 aa10.94□□□□□ -0.66
TRIM28-211ENST00000597968 MTCP1P56278 107 aa10.94□□□□□ -0.66
TRIM28-211ENST00000597968 P2RX3P56373 397 aa10.94□□□□□ -0.66
TRIM28-211ENST00000597968 SLC34A1Q06495 639 aa10.94□□□□□ -0.66
TRIM28-211ENST00000597968 PDZK1IP1Q13113 114 aa10.94□□□□□ -0.66
TRIM28-211ENST00000597968 ARSJQ5FYB0 599 aaPredicted RBP10.94□□□□□ -0.66
TRIM28-211ENST00000597968 LDLRAD2Q5SZI1 272 aa10.94□□□□□ -0.66
TRIM28-211ENST00000597968 CHST4Q8NCG5 386 aa10.94□□□□□ -0.66
TRIM28-211ENST00000597968 NDNFQ8TB73 568 aa10.94□□□□□ -0.66
TRIM28-211ENST00000597968 EME1Q96AY2 570 aa10.94□□□□□ -0.66
TRIM28-211ENST00000597968 R3HDM4Q96D70 268 aa10.94□□□□□ -0.66
TRIM28-211ENST00000597968 CENPNQ96H22 339 aaPredicted RBP10.94□□□□□ -0.66
TRIM28-211ENST00000597968 HMG20AQ9NP66 347 aa10.94□□□□□ -0.66
TRIM28-211ENST00000597968 A0A087X0M5 115 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms