RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 SLC7A11Q9UPY5 501 aa12.39□□□□□ -0.43
LIG1-214ENST00000597146 F2RL2O00254 374 aa12.38□□□□□ -0.43
LIG1-214ENST00000597146 SYT7O43581 403 aa12.38□□□□□ -0.43
LIG1-214ENST00000597146 ENTPD6O75354 484 aa12.38□□□□□ -0.43
LIG1-214ENST00000597146 SULT1C4O75897 302 aa12.38□□□□□ -0.43
LIG1-214ENST00000597146 TTRP02766 147 aa12.38□□□□□ -0.43
LIG1-214ENST00000597146 JUNBP17275 347 aaPredicted RBP12.38□□□□□ -0.43
LIG1-214ENST00000597146 LGALS4P56470 323 aa12.38□□□□□ -0.43
LIG1-214ENST00000597146 ERVFRD-1P60508 538 aa12.38□□□□□ -0.43
LIG1-214ENST00000597146 CLVS2Q5SYC1 327 aa12.38□□□□□ -0.43
LIG1-214ENST00000597146 HAGHLQ6PII5 290 aaPredicted RBP12.38□□□□□ -0.43
LIG1-214ENST00000597146 ADAMTSL5Q6ZMM2 481 aa12.38□□□□□ -0.43
LIG1-214ENST00000597146 CENPVQ7Z7K6 275 aaPredicted RBP12.38□□□□□ -0.43
LIG1-214ENST00000597146 ZNF573Q86YE8 665 aa12.38□□□□□ -0.43
LIG1-214ENST00000597146 ZNF555Q8NEP9 628 aa12.38□□□□□ -0.43
LIG1-214ENST00000597146 RPS4Y2Q8TD47 263 aa12.38□□□□□ -0.43
LIG1-214ENST00000597146 HRASLS5Q96KN8 279 aa12.38□□□□□ -0.43
LIG1-214ENST00000597146 ABCB10Q9NRK6 738 aa12.38□□□□□ -0.43
LIG1-214ENST00000597146 GPR173Q9NS66 373 aa12.38□□□□□ -0.43
LIG1-214ENST00000597146 SLC22A13Q9Y226 551 aa12.38□□□□□ -0.43
LIG1-214ENST00000597146 A6NIN4 97 aa12.37□□□□□ -0.43
LIG1-214ENST00000597146 PRR32B1ATL7 298 aa12.37□□□□□ -0.43
LIG1-214ENST00000597146 H3BSH0 61 aa12.37□□□□□ -0.43
LIG1-214ENST00000597146 SIGLEC5O15389 551 aa12.37□□□□□ -0.43
LIG1-214ENST00000597146 MPZL2O60487 215 aa12.37□□□□□ -0.43
LIG1-214ENST00000597146 OCM2P0CE71 109 aa12.37□□□□□ -0.43
LIG1-214ENST00000597146 OCMP0CE72 109 aaPredicted RBP12.37□□□□□ -0.43
LIG1-214ENST00000597146 CAPZA1P52907 286 aa12.37□□□□□ -0.43
LIG1-214ENST00000597146 CAV3P56539 151 aa12.37□□□□□ -0.43
LIG1-214ENST00000597146 SNRPGP62308 76 aaKnown RBP12.37□□□□□ -0.43
LIG1-214ENST00000597146 ACTC1P68032 377 aa12.37□□□□□ -0.43
LIG1-214ENST00000597146 ACTA1P68133 377 aa12.37□□□□□ -0.43
LIG1-214ENST00000597146 TP53I3Q53FA7 332 aa12.37□□□□□ -0.43
LIG1-214ENST00000597146 KCTD20Q7Z5Y7 419 aa12.37□□□□□ -0.43
LIG1-214ENST00000597146 PQLC1Q8N2U9 271 aa12.37□□□□□ -0.43
LIG1-214ENST00000597146 RCHY1Q96PM5 261 aa12.37□□□□□ -0.43
LIG1-214ENST00000597146 ZNF649Q9BS31 505 aa12.37□□□□□ -0.43
LIG1-214ENST00000597146 TLNRD1Q9H1K6 362 aa12.37□□□□□ -0.43
LIG1-214ENST00000597146 OR51I2Q9H344 312 aa12.37□□□□□ -0.43
LIG1-214ENST00000597146 C19orf12Q9NSK7 152 aa12.37□□□□□ -0.43
LIG1-214ENST00000597146 FAM230AA0A1W2PPH8 454 aa12.36□□□□□ -0.43
LIG1-214ENST00000597146 DLGAP1O14490 977 aa12.36□□□□□ -0.43
LIG1-214ENST00000597146 FAM76BQ5HYJ3 339 aa12.36□□□□□ -0.43
LIG1-214ENST00000597146 LDLRAD2Q5SZI1 272 aa12.36□□□□□ -0.43
LIG1-214ENST00000597146 UNQ9370/PRO34162Q6UXP9 181 aa12.36□□□□□ -0.43
LIG1-214ENST00000597146 SSX6Q7RTT6 188 aa12.36□□□□□ -0.43
LIG1-214ENST00000597146 CCDC54Q8NEL0 328 aa12.36□□□□□ -0.43
LIG1-214ENST00000597146 OR4X2Q8NGF9 303 aa12.36□□□□□ -0.43
LIG1-214ENST00000597146 ANGPTL6Q8NI99 470 aa12.36□□□□□ -0.43
LIG1-214ENST00000597146 HPSE2Q8WWQ2 592 aa12.36□□□□□ -0.43
LIG1-214ENST00000597146 DNTTIP1Q9H147 329 aa12.36□□□□□ -0.43
LIG1-214ENST00000597146 NLKQ9UBE8 527 aa12.36□□□□□ -0.43
LIG1-214ENST00000597146 PITPNC1Q9UKF7 332 aa12.36□□□□□ -0.43
LIG1-214ENST00000597146 FAM90A8PA6NJQ4 464 aa12.35□□□□□ -0.43
LIG1-214ENST00000597146 OR2AT4A6NND4 320 aa12.35□□□□□ -0.43
LIG1-214ENST00000597146 J3QLW9 94 aa12.35□□□□□ -0.43
LIG1-214ENST00000597146 ZNF19P17023 458 aa12.35□□□□□ -0.43
LIG1-214ENST00000597146 HAAOP46952 286 aa12.35□□□□□ -0.43
LIG1-214ENST00000597146 SSX2Q16385 188 aa12.35□□□□□ -0.43
LIG1-214ENST00000597146 ZNF782Q6ZMW2 699 aaPredicted RBP12.35□□□□□ -0.43
LIG1-214ENST00000597146 CATSPERDQ86XM0 798 aa12.35□□□□□ -0.43
LIG1-214ENST00000597146 C11orf42Q8N5U0 333 aa12.35□□□□□ -0.43
LIG1-214ENST00000597146 ACBD7Q8N6N7 88 aa12.35□□□□□ -0.43
LIG1-214ENST00000597146 ZNRF1Q8ND25 227 aa12.35□□□□□ -0.43
LIG1-214ENST00000597146 TMEM185AQ8NFB2 350 aa12.35□□□□□ -0.43
LIG1-214ENST00000597146 OR14K1Q8NGZ2 314 aa12.35□□□□□ -0.43
LIG1-214ENST00000597146 MCRIP2Q9BUT9 160 aaKnown RBP12.35□□□□□ -0.43
LIG1-214ENST00000597146 HEXA-AS1Q9H8Q6 139 aa12.35□□□□□ -0.43
LIG1-214ENST00000597146 RASL12Q9NYN1 266 aa12.35□□□□□ -0.43
LIG1-214ENST00000597146 POLDIP2Q9Y2S7 368 aa12.35□□□□□ -0.43
LIG1-214ENST00000597146 V9GYS6 101 aa12.35□□□□□ -0.43
LIG1-214ENST00000597146 A0A1B0GTI1 187 aa12.34□□□□□ -0.43
LIG1-214ENST00000597146 LOC100130705A0A1B0GUX0 176 aa12.34□□□□□ -0.43
LIG1-214ENST00000597146 SRSF10O75494 262 aaKnown RBP12.34□□□□□ -0.43
LIG1-214ENST00000597146 RHBDL1O75783 438 aa12.34□□□□□ -0.43
LIG1-214ENST00000597146 GATBO75879 557 aaKnown RBP12.34□□□□□ -0.43
LIG1-214ENST00000597146 NXPH2O95156 264 aa12.34□□□□□ -0.43
LIG1-214ENST00000597146 FADS2O95864 444 aaKnown RBP12.34□□□□□ -0.43
LIG1-214ENST00000597146 HTR1AP08908 422 aa12.34□□□□□ -0.43
LIG1-214ENST00000597146 ACAA1P09110 424 aaPredicted RBP12.34□□□□□ -0.43
LIG1-214ENST00000597146 THBS3P49746 956 aa12.34□□□□□ -0.43
LIG1-214ENST00000597146 SLC25A30Q5SVS4 291 aa12.34□□□□□ -0.43
LIG1-214ENST00000597146 TMEM244Q5VVB8 128 aa12.34□□□□□ -0.43
LIG1-214ENST00000597146 C18orf65Q6ZTR6 163 aa12.34□□□□□ -0.43
LIG1-214ENST00000597146 TRMT10AQ8TBZ6 339 aaKnown RBP12.34□□□□□ -0.43
LIG1-214ENST00000597146 AQP3Q92482 292 aa12.34□□□□□ -0.43
LIG1-214ENST00000597146 SLC29A1Q99808 456 aa12.34□□□□□ -0.43
LIG1-214ENST00000597146 NKX1-2Q9UD57 310 aaPredicted RBP12.34□□□□□ -0.43
LIG1-214ENST00000597146 FRAS1Q86XX4 4008 aa12.34□□□□□ -0.43
LIG1-214ENST00000597146 DHRS7CA6NNS2 312 aa12.33□□□□□ -0.44
LIG1-214ENST00000597146 CYB5AP00167 134 aa12.33□□□□□ -0.44
LIG1-214ENST00000597146 IGLV3-1P01715 115 aa12.33□□□□□ -0.44
LIG1-214ENST00000597146 UBCP0CG48 685 aaKnown RBP12.33□□□□□ -0.44
LIG1-214ENST00000597146 CCL3L1P16619 93 aa12.33□□□□□ -0.44
LIG1-214ENST00000597146 ZNF20P17024 532 aa12.33□□□□□ -0.44
LIG1-214ENST00000597146 LUMP51884 338 aaPredicted RBP12.33□□□□□ -0.44
LIG1-214ENST00000597146 ZNF85Q03923 595 aa12.33□□□□□ -0.44
LIG1-214ENST00000597146 SMIM21Q3B7S5 101 aa12.33□□□□□ -0.44
LIG1-214ENST00000597146 LHFPL3Q86UP9 236 aa12.33□□□□□ -0.44
LIG1-214ENST00000597146 FOXRED1Q96CU9 486 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 782.6 ms