RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 DCLRE1BQ9H816 532 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 NEK6Q9HC98 313 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 HMG20AQ9NP66 347 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 RBFOX1Q9NWB1 397 aaKnown RBP10.66□□□□□ -0.7
USE1-207ENST00000596136 BABAM2Q9NXR7 383 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 ZNRD1Q9P1U0 126 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 EXOSC1Q9Y3B2 195 aaKnown RBP10.66□□□□□ -0.7
USE1-207ENST00000596136 SF3B6Q9Y3B4 125 aaKnown RBP10.66□□□□□ -0.7
USE1-207ENST00000596136 POM121CA8CG34 1229 aa10.65□□□□□ -0.7
USE1-207ENST00000596136 ANKRD65E5RJM6 399 aa10.65□□□□□ -0.7
USE1-207ENST00000596136 SPRY1O43609 319 aaPredicted RBP10.65□□□□□ -0.7
USE1-207ENST00000596136 SULT1B1O43704 296 aa10.65□□□□□ -0.7
USE1-207ENST00000596136 NDUFA7O95182 113 aa10.65□□□□□ -0.7
USE1-207ENST00000596136 HAND1O96004 215 aa10.65□□□□□ -0.7
USE1-207ENST00000596136 IGHV4-59P01825 116 aa10.65□□□□□ -0.7
USE1-207ENST00000596136 RBP4P02753 201 aa10.65□□□□□ -0.7
USE1-207ENST00000596136 PIPP12273 146 aaPredicted RBP10.65□□□□□ -0.7
USE1-207ENST00000596136 LMO1P25800 156 aa10.65□□□□□ -0.7
USE1-207ENST00000596136 SAA4P35542 130 aa10.65□□□□□ -0.7
USE1-207ENST00000596136 POU3F4P49335 361 aa10.65□□□□□ -0.7
USE1-207ENST00000596136 ZP1P60852 638 aa10.65□□□□□ -0.7
USE1-207ENST00000596136 PRB3Q04118 309 aaPredicted RBP10.65□□□□□ -0.7
USE1-207ENST00000596136 MEF2CQ06413 473 aaPredicted RBP10.65□□□□□ -0.7
USE1-207ENST00000596136 ZNF273Q14593 569 aa10.65□□□□□ -0.7
USE1-207ENST00000596136 OR2G6Q5TZ20 316 aa10.65□□□□□ -0.7
USE1-207ENST00000596136 XAF1Q6GPH4 301 aa10.65□□□□□ -0.7
USE1-207ENST00000596136 ASPHD2Q6ICH7 369 aa10.65□□□□□ -0.7
USE1-207ENST00000596136 ASCC1Q8N9N2 400 aaKnown RBP10.65□□□□□ -0.7
USE1-207ENST00000596136 OR4M1Q8NGD0 313 aa10.65□□□□□ -0.7
USE1-207ENST00000596136 OR52N4Q8NGI2 321 aa10.65□□□□□ -0.7
USE1-207ENST00000596136 OR52N1Q8NH53 320 aa10.65□□□□□ -0.7
USE1-207ENST00000596136 GGHQ92820 318 aa10.65□□□□□ -0.7
USE1-207ENST00000596136 TMEM80Q96HE8 168 aa10.65□□□□□ -0.7
USE1-207ENST00000596136 DPAGT1Q9H3H5 408 aa10.65□□□□□ -0.7
USE1-207ENST00000596136 HEXA-AS1Q9H8Q6 139 aa10.65□□□□□ -0.7
USE1-207ENST00000596136 PLCXD1Q9NUJ7 323 aa10.65□□□□□ -0.7
USE1-207ENST00000596136 IL36RNQ9UBH0 155 aa10.65□□□□□ -0.7
USE1-207ENST00000596136 DHDHQ9UQ10 334 aa10.65□□□□□ -0.7
USE1-207ENST00000596136 FAM96BQ9Y3D0 163 aa10.65□□□□□ -0.7
USE1-207ENST00000596136 SIRT4Q9Y6E7 314 aaPredicted RBP10.65□□□□□ -0.7
USE1-207ENST00000596136 A0A1B0GUS0 222 aa10.64□□□□□ -0.71
USE1-207ENST00000596136 hCG_1809904A0A1W2PP81 198 aa10.64□□□□□ -0.71
USE1-207ENST00000596136 A0A1W2PPE2 198 aa10.64□□□□□ -0.71
USE1-207ENST00000596136 A0A1W2PR64 198 aa10.64□□□□□ -0.71
USE1-207ENST00000596136 A0A1W2PRV1 198 aa10.64□□□□□ -0.71
USE1-207ENST00000596136 PSPNO60542 156 aa10.64□□□□□ -0.71
USE1-207ENST00000596136 INMTO95050 263 aa10.64□□□□□ -0.71
USE1-207ENST00000596136 GNAO1P09471 354 aa10.64□□□□□ -0.71
USE1-207ENST00000596136 CCL3L1P16619 93 aa10.64□□□□□ -0.71
USE1-207ENST00000596136 ERP29P30040 261 aaKnown RBP10.64□□□□□ -0.71
USE1-207ENST00000596136 RELBQ01201 579 aa10.64□□□□□ -0.71
USE1-207ENST00000596136 KISS1Q15726 138 aa10.64□□□□□ -0.71
USE1-207ENST00000596136 FIP1L1Q6UN15 594 aaKnown RBP10.64□□□□□ -0.71
USE1-207ENST00000596136 C8orf59Q8N0T1 100 aaPredicted RBP10.64□□□□□ -0.71
USE1-207ENST00000596136 PNKDQ8N490 385 aa10.64□□□□□ -0.71
USE1-207ENST00000596136 BEND2Q8NDZ0 799 aa10.64□□□□□ -0.71
USE1-207ENST00000596136 GPR148Q8TDV2 347 aa10.64□□□□□ -0.71
USE1-207ENST00000596136 TFAP2CQ92754 450 aa10.64□□□□□ -0.71
USE1-207ENST00000596136 SPACA5Q96QH8 159 aa10.64□□□□□ -0.71
USE1-207ENST00000596136 MEGF9Q9H1U4 602 aa10.64□□□□□ -0.71
USE1-207ENST00000596136 CNOT2Q9NZN8 540 aaKnown RBP10.64□□□□□ -0.71
USE1-207ENST00000596136 C1RLQ9NZP8 487 aa10.64□□□□□ -0.71
USE1-207ENST00000596136 CLEC2DQ9UHP7 191 aa10.64□□□□□ -0.71
USE1-207ENST00000596136 KIAA2026Q5HYC2 2103 aa10.63□□□□□ -0.71
USE1-207ENST00000596136 MEIOCA2RUB1 952 aa10.63□□□□□ -0.71
USE1-207ENST00000596136 EFCAB10A6NFE3 127 aa10.63□□□□□ -0.71
USE1-207ENST00000596136 MGST3O14880 152 aa10.63□□□□□ -0.71
USE1-207ENST00000596136 ANGPTL7O43827 346 aa10.63□□□□□ -0.71
USE1-207ENST00000596136 LALBAP00709 142 aa10.63□□□□□ -0.71
USE1-207ENST00000596136 ALDOBP05062 364 aa10.63□□□□□ -0.71
USE1-207ENST00000596136 OCM2P0CE71 109 aa10.63□□□□□ -0.71
USE1-207ENST00000596136 OCMP0CE72 109 aaPredicted RBP10.63□□□□□ -0.71
USE1-207ENST00000596136 ZNF728P0DKX0 622 aa10.63□□□□□ -0.71
USE1-207ENST00000596136 PRKACAP17612 351 aa10.63□□□□□ -0.71
USE1-207ENST00000596136 MYL12AP19105 171 aa10.63□□□□□ -0.71
USE1-207ENST00000596136 ERVFRD-1P60508 538 aa10.63□□□□□ -0.71
USE1-207ENST00000596136 ST3GAL4Q11206 333 aa10.63□□□□□ -0.71
USE1-207ENST00000596136 TAF9Q16594 264 aa10.63□□□□□ -0.71
USE1-207ENST00000596136 AANATQ16613 207 aa10.63□□□□□ -0.71
USE1-207ENST00000596136 DMKNQ6E0U4 476 aaPredicted RBP10.63□□□□□ -0.71
USE1-207ENST00000596136 ELP2Q6IA86 826 aa10.63□□□□□ -0.71
USE1-207ENST00000596136 GDPD3Q7L5L3 318 aa10.63□□□□□ -0.71
USE1-207ENST00000596136 TCF23Q7RTU1 214 aa10.63□□□□□ -0.71
USE1-207ENST00000596136 Q8NFD4 153 aa10.63□□□□□ -0.71
USE1-207ENST00000596136 PXT1Q8NFP0 134 aa10.63□□□□□ -0.71
USE1-207ENST00000596136 TSEN15Q8WW01 171 aaKnown RBP10.63□□□□□ -0.71
USE1-207ENST00000596136 TAF15Q92804 592 aaKnown RBP eCLIP10.63□□□□□ -0.71
USE1-207ENST00000596136 RFT1Q96AA3 541 aa10.63□□□□□ -0.71
USE1-207ENST00000596136 SMIM19Q96E16 107 aa10.63□□□□□ -0.71
USE1-207ENST00000596136 SLITRK2Q9H156 845 aa10.63□□□□□ -0.71
USE1-207ENST00000596136 GLS2Q9UI32 602 aa10.63□□□□□ -0.71
USE1-207ENST00000596136 PSORS1C1Q9UIG5 152 aa10.63□□□□□ -0.71
USE1-207ENST00000596136 ZNF281Q9Y2X9 895 aa10.63□□□□□ -0.71
USE1-207ENST00000596136 PKD1L1Q8TDX9 2849 aa10.63□□□□□ -0.71
USE1-207ENST00000596136 A0A1W2PRD5 423 aa10.62□□□□□ -0.71
USE1-207ENST00000596136 A0A1W2PRF3 423 aa10.62□□□□□ -0.71
USE1-207ENST00000596136 A0A1W2PRM7 423 aa10.62□□□□□ -0.71
USE1-207ENST00000596136 FAM90A8PA6NJQ4 464 aa10.62□□□□□ -0.71
USE1-207ENST00000596136 H0YJX3 145 aa10.62□□□□□ -0.71
USE1-207ENST00000596136 SH2D1BO14796 132 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms