RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 EMG1Q92979 244 aaKnown RBP9.16□□□□□ -0.94
VRK3-210ENST00000596121 MYDGFQ969H8 173 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 OR14A2Q96R54 314 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 HMG20AQ9NP66 347 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 SCN3BQ9NY72 215 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 ONECUT1Q9UBC0 465 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 RAB26Q9ULW5 256 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 ERGIC3Q9Y282 383 aa9.16□□□□□ -0.94
VRK3-210ENST00000596121 RRP15Q9Y3B9 282 aaKnown RBP9.16□□□□□ -0.94
VRK3-210ENST00000596121 MEX3AA1L020 520 aaKnown RBP9.15□□□□□ -0.94
VRK3-210ENST00000596121 RNASEK-C17orf49H0YIS7 233 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 PSPNO60542 156 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 HAND1O96004 215 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 CD1AP06126 327 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 HCKP08631 526 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 OCMP0CE72 109 aaPredicted RBP9.15□□□□□ -0.94
VRK3-210ENST00000596121 TMEM225BP0DP42 221 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 PRKACAP17612 351 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 OR3A4PP47883 348 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 HSPA13P48723 471 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 CAPZA1P52907 286 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 HILS1P60008 231 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 ACSM1Q08AH1 577 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 ZNF146Q15072 292 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 PDCD1Q15116 288 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 SPHARQ15513 63 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 Q499Y3 187 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 YIF1BQ5BJH7 314 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 METTL11BQ5VVY1 283 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 HCP5Q6MZN7 132 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 Q6P435 159 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 ASCL4Q6XD76 172 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 USP43Q70EL4 1123 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 SAXO1Q8IYX7 474 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 BPIFB2Q8N4F0 458 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 OR4S1Q8NGB4 309 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 LHX4Q969G2 390 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 MND1Q9BWT6 205 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 SEBOXQ9HB31 216 aaPredicted RBP9.15□□□□□ -0.94
VRK3-210ENST00000596121 SIRT7Q9NRC8 400 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 ZNF581Q9P0T4 197 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 TPRKBQ9Y3C4 175 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 KPTNQ9Y664 436 aa9.15□□□□□ -0.94
VRK3-210ENST00000596121 RGS10O43665 173 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 ALDOBP05062 364 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 CD2P06729 351 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 CHRM2P08172 466 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 CCL3L1P16619 93 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 FPR2P25090 351 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 TGFBR2P37173 567 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 OR3A1P47881 315 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 DLX6P56179 175 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 TAS2R43P59537 309 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 BDH1Q02338 343 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 KLRD1Q13241 179 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 ZNF273Q14593 569 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 DEFB112Q30KQ8 113 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 UNQ9370/PRO34162Q6UXP9 181 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 TCF23Q7RTU1 214 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 SATL1Q86VE3 508 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 LYPD6Q86Y78 171 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 FAM185AQ8N0U4 392 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 PNKDQ8N490 385 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 PIP4P2Q8N4L2 257 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 KIR3DL3Q8N743 410 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.14□□□□□ -0.95
VRK3-210ENST00000596121 ASCC1Q8N9N2 400 aaKnown RBP9.14□□□□□ -0.95
VRK3-210ENST00000596121 ZSCAN4Q8NAM6 433 aaPredicted RBP9.14□□□□□ -0.95
VRK3-210ENST00000596121 OR10K1Q8NGX5 313 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 ZNF418Q8TF45 676 aaPredicted RBP9.14□□□□□ -0.95
VRK3-210ENST00000596121 DMRTB1Q96MA1 342 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 DERL3Q96Q80 235 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 SUCNR1Q9BXA5 334 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 MS4A7Q9GZW8 240 aaPredicted RBP9.14□□□□□ -0.95
VRK3-210ENST00000596121 CHST6Q9GZX3 395 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 FAM234AQ9H0X4 552 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 PPIL3Q9H2H8 161 aaKnown RBP9.14□□□□□ -0.95
VRK3-210ENST00000596121 NEK6Q9HC98 313 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 GSTK1Q9Y2Q3 226 aa9.14□□□□□ -0.95
VRK3-210ENST00000596121 TRBV23-1A0A0A0MS06 115 aa9.13□□□□□ -0.95
VRK3-210ENST00000596121 A0A0A6YYJ9 748 aa9.13□□□□□ -0.95
VRK3-210ENST00000596121 IGHV1-69DA0A0B4J2H0 117 aa9.13□□□□□ -0.95
VRK3-210ENST00000596121 A0A1W2PQ09 198 aa9.13□□□□□ -0.95
VRK3-210ENST00000596121 SIRPB1O00241 398 aa9.13□□□□□ -0.95
VRK3-210ENST00000596121 DENRO43583 198 aaKnown RBP9.13□□□□□ -0.95
VRK3-210ENST00000596121 CDRT1O95170 752 aa9.13□□□□□ -0.95
VRK3-210ENST00000596121 OR2H2O95918 312 aa9.13□□□□□ -0.95
VRK3-210ENST00000596121 CYB5AP00167 134 aa9.13□□□□□ -0.95
VRK3-210ENST00000596121 IGHV1-69P01742 117 aa9.13□□□□□ -0.95
VRK3-210ENST00000596121 PTGFRP43088 359 aa9.13□□□□□ -0.95
VRK3-210ENST00000596121 RPL31P62899 125 aaKnown RBP9.13□□□□□ -0.95
VRK3-210ENST00000596121 MED22Q15528 200 aa9.13□□□□□ -0.95
VRK3-210ENST00000596121 FAM27D1Q5T7N8 215 aa9.13□□□□□ -0.95
VRK3-210ENST00000596121 ELP2Q6IA86 826 aa9.13□□□□□ -0.95
VRK3-210ENST00000596121 C1orf122Q6ZSJ8 110 aa9.13□□□□□ -0.95
VRK3-210ENST00000596121 PRSS48Q7RTY5 328 aa9.13□□□□□ -0.95
VRK3-210ENST00000596121 Q8IYB0 196 aa9.13□□□□□ -0.95
VRK3-210ENST00000596121 TPRX1Q8N7U7 411 aa9.13□□□□□ -0.95
VRK3-210ENST00000596121 Q8NFD4 153 aa9.13□□□□□ -0.95
VRK3-210ENST00000596121 TNFAIP8L1Q8WVP5 186 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms