RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 TCF19Q9Y242 345 aa13.75□□□□□ -0.21
CCDC9-202ENST00000595659 hADV38S2A0JD32 116 aa13.74□□□□□ -0.21
CCDC9-202ENST00000595659 DAPL1A0PJW8 107 aa13.74□□□□□ -0.21
CCDC9-202ENST00000595659 A6NDX4 124 aa13.74□□□□□ -0.21
CCDC9-202ENST00000595659 VGLL3A8MV65 326 aa13.74□□□□□ -0.21
CCDC9-202ENST00000595659 G3V4G9 280 aa13.74□□□□□ -0.21
CCDC9-202ENST00000595659 SIRPB1O00241 398 aa13.74□□□□□ -0.21
CCDC9-202ENST00000595659 PSPNO60542 156 aa13.74□□□□□ -0.21
CCDC9-202ENST00000595659 MMP23AO75900 390 aa13.74□□□□□ -0.21
CCDC9-202ENST00000595659 ZNF20P17024 532 aa13.74□□□□□ -0.21
CCDC9-202ENST00000595659 PRKACAP17612 351 aa13.74□□□□□ -0.21
CCDC9-202ENST00000595659 ATF1P18846 271 aa13.74□□□□□ -0.21
CCDC9-202ENST00000595659 ACTA2P62736 377 aa13.74□□□□□ -0.21
CCDC9-202ENST00000595659 ACTG2P63267 376 aa13.74□□□□□ -0.21
CCDC9-202ENST00000595659 ACTC1P68032 377 aa13.74□□□□□ -0.21
CCDC9-202ENST00000595659 ACTA1P68133 377 aa13.74□□□□□ -0.21
CCDC9-202ENST00000595659 ZNF91Q05481 1191 aa13.74□□□□□ -0.21
CCDC9-202ENST00000595659 NSUN5P1Q3KNT7 163 aa13.74□□□□□ -0.21
CCDC9-202ENST00000595659 LIAT1Q6ZQX7 453 aa13.74□□□□□ -0.21
CCDC9-202ENST00000595659 Q6ZS46 218 aa13.74□□□□□ -0.21
CCDC9-202ENST00000595659 FAM58AQ8N1B3 248 aa13.74□□□□□ -0.21
CCDC9-202ENST00000595659 ZNF676Q8N7Q3 588 aa13.74□□□□□ -0.21
CCDC9-202ENST00000595659 OR10AC1Q8NH08 325 aa13.74□□□□□ -0.21
CCDC9-202ENST00000595659 CFHR4Q92496 578 aa13.74□□□□□ -0.21
CCDC9-202ENST00000595659 FOXRED1Q96CU9 486 aaPredicted RBP13.74□□□□□ -0.21
CCDC9-202ENST00000595659 MALSU1Q96EH3 234 aa13.74□□□□□ -0.21
CCDC9-202ENST00000595659 SPACA5Q96QH8 159 aa13.74□□□□□ -0.21
CCDC9-202ENST00000595659 TBL2Q9Y4P3 447 aaKnown RBP13.74□□□□□ -0.21
CCDC9-202ENST00000595659 WNK1Q9H4A3 2382 aa13.74□□□□□ -0.21
CCDC9-202ENST00000595659 J3QLW9 94 aa13.73□□□□□ -0.21
CCDC9-202ENST00000595659 CYB5AP00167 134 aa13.73□□□□□ -0.21
CCDC9-202ENST00000595659 CD28P10747 220 aa13.73□□□□□ -0.21
CCDC9-202ENST00000595659 ZNF19P17023 458 aa13.73□□□□□ -0.21
CCDC9-202ENST00000595659 AZGP1P25311 298 aaKnown RBP13.73□□□□□ -0.21
CCDC9-202ENST00000595659 PEX2P28328 305 aa13.73□□□□□ -0.21
CCDC9-202ENST00000595659 MEF2CQ06413 473 aaPredicted RBP13.73□□□□□ -0.21
CCDC9-202ENST00000595659 SLC34A1Q06495 639 aa13.73□□□□□ -0.21
CCDC9-202ENST00000595659 TMEM244Q5VVB8 128 aa13.73□□□□□ -0.21
CCDC9-202ENST00000595659 C11orf88Q6PI97 169 aa13.73□□□□□ -0.21
CCDC9-202ENST00000595659 BAIAP2L2Q6UXY1 529 aa13.73□□□□□ -0.21
CCDC9-202ENST00000595659 OR5D18Q8NGL1 313 aa13.73□□□□□ -0.21
CCDC9-202ENST00000595659 NDNFQ8TB73 568 aa13.73□□□□□ -0.21
CCDC9-202ENST00000595659 RPS4Y2Q8TD47 263 aa13.73□□□□□ -0.21
CCDC9-202ENST00000595659 PP6455Q8WZ26 134 aa13.73□□□□□ -0.21
CCDC9-202ENST00000595659 C10orf35Q96D05 121 aa13.73□□□□□ -0.21
CCDC9-202ENST00000595659 SERTAD4Q9NUC0 356 aa13.73□□□□□ -0.21
CCDC9-202ENST00000595659 GSTK1Q9Y2Q3 226 aa13.73□□□□□ -0.21
CCDC9-202ENST00000595659 TRBV2A0A0J9YWF9 115 aa13.72□□□□□ -0.21
CCDC9-202ENST00000595659 J3QRE1 110 aa13.72□□□□□ -0.21
CCDC9-202ENST00000595659 EI24O14681 340 aa13.72□□□□□ -0.21
CCDC9-202ENST00000595659 RBP4P02753 201 aa13.72□□□□□ -0.21
CCDC9-202ENST00000595659 PRB2P02812 416 aaPredicted RBP13.72□□□□□ -0.21
CCDC9-202ENST00000595659 OCM2P0CE71 109 aa13.72□□□□□ -0.21
CCDC9-202ENST00000595659 OCMP0CE72 109 aaPredicted RBP13.72□□□□□ -0.21
CCDC9-202ENST00000595659 OR3A1P47881 315 aa13.72□□□□□ -0.21
CCDC9-202ENST00000595659 BLCAPP62952 87 aa13.72□□□□□ -0.21
CCDC9-202ENST00000595659 PDZK1IP1Q13113 114 aa13.72□□□□□ -0.21
CCDC9-202ENST00000595659 TRAPPC6BQ86SZ2 158 aa13.72□□□□□ -0.21
CCDC9-202ENST00000595659 ENTHD1Q8IYW4 607 aa13.72□□□□□ -0.21
CCDC9-202ENST00000595659 DNAAF1Q8NEP3 725 aa13.72□□□□□ -0.21
CCDC9-202ENST00000595659 OR51A4Q8NGJ6 313 aa13.72□□□□□ -0.21
CCDC9-202ENST00000595659 CDCA4Q9BXL8 241 aa13.72□□□□□ -0.21
CCDC9-202ENST00000595659 ING3Q9NXR8 418 aa13.72□□□□□ -0.21
CCDC9-202ENST00000595659 LINC00312Q9Y6C7 94 aa13.72□□□□□ -0.21
CCDC9-202ENST00000595659 SESN1Q9Y6P5 492 aa13.72□□□□□ -0.21
CCDC9-202ENST00000595659 PRKDCP78527 4128 aaKnown RBP13.72□□□□□ -0.21
CCDC9-202ENST00000595659 NOTCH1P46531 2555 aa13.71□□□□□ -0.21
CCDC9-202ENST00000595659 IGHV2-26A0A0B4J1V2 119 aa13.71□□□□□ -0.21
CCDC9-202ENST00000595659 IGKV1-12A0A0C4DH73 117 aa13.71□□□□□ -0.21
CCDC9-202ENST00000595659 FAM172BPA6NC97 362 aa13.71□□□□□ -0.21
CCDC9-202ENST00000595659 SLC16A6O15403 523 aa13.71□□□□□ -0.21
CCDC9-202ENST00000595659 IGKV1D-12P01611 117 aa13.71□□□□□ -0.21
CCDC9-202ENST00000595659 OPN1MWP04001 364 aa13.71□□□□□ -0.21
CCDC9-202ENST00000595659 ALPLP05186 524 aa13.71□□□□□ -0.21
CCDC9-202ENST00000595659 HTR1AP08908 422 aa13.71□□□□□ -0.21
CCDC9-202ENST00000595659 OPN1MW2P0DN77 364 aa13.71□□□□□ -0.21
CCDC9-202ENST00000595659 OPN1MW3P0DN78 364 aa13.71□□□□□ -0.21
CCDC9-202ENST00000595659 PRKACBP22694 351 aa13.71□□□□□ -0.21
CCDC9-202ENST00000595659 SCN1BQ07699 218 aa13.71□□□□□ -0.21
CCDC9-202ENST00000595659 TMEM95Q3KNT9 176 aa13.71□□□□□ -0.21
CCDC9-202ENST00000595659 PRAMEF5Q5TYX0 476 aa13.71□□□□□ -0.21
CCDC9-202ENST00000595659 Q8IYB0 196 aa13.71□□□□□ -0.21
CCDC9-202ENST00000595659 OR13C3Q8NGS6 347 aa13.71□□□□□ -0.21
CCDC9-202ENST00000595659 OR13C9Q8NGT0 318 aa13.71□□□□□ -0.21
CCDC9-202ENST00000595659 TRUB1Q8WWH5 349 aaKnown RBP13.71□□□□□ -0.21
CCDC9-202ENST00000595659 HRASLS5Q96KN8 279 aa13.71□□□□□ -0.21
CCDC9-202ENST00000595659 C4orf36Q96KX1 117 aa13.71□□□□□ -0.21
CCDC9-202ENST00000595659 OPALINQ96PE5 141 aa13.71□□□□□ -0.21
CCDC9-202ENST00000595659 TMEM133Q9H2Q1 129 aa13.71□□□□□ -0.21
CCDC9-202ENST00000595659 ORC6Q9Y5N6 252 aa13.71□□□□□ -0.21
CCDC9-202ENST00000595659 TGP01266 2768 aa13.71□□□□□ -0.22
CCDC9-202ENST00000595659 F2RL2O00254 374 aa13.7□□□□□ -0.22
CCDC9-202ENST00000595659 MGST3O14880 152 aa13.7□□□□□ -0.22
CCDC9-202ENST00000595659 FBXO24O75426 580 aa13.7□□□□□ -0.22
CCDC9-202ENST00000595659 ISG15P05161 165 aa13.7□□□□□ -0.22
CCDC9-202ENST00000595659 CD24P25063 80 aa13.7□□□□□ -0.22
CCDC9-202ENST00000595659 P2RX3P56373 397 aa13.7□□□□□ -0.22
CCDC9-202ENST00000595659 SNRPGP62308 76 aaKnown RBP13.7□□□□□ -0.22
CCDC9-202ENST00000595659 KPNB1Q14974 876 aaKnown RBP13.7□□□□□ -0.22
CCDC9-202ENST00000595659 ZNF146Q15072 292 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms