RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 UBE2NP61088 152 aaKnown RBP10.8□□□□□ -0.68
SCAF1-202ENST00000595242 PSG4Q00888 419 aa10.8□□□□□ -0.68
SCAF1-202ENST00000595242 RNASE12Q5GAN4 147 aaKnown RBP10.8□□□□□ -0.68
SCAF1-202ENST00000595242 RAB12Q6IQ22 244 aa10.8□□□□□ -0.68
SCAF1-202ENST00000595242 ZNF774Q6NX45 483 aa10.8□□□□□ -0.68
SCAF1-202ENST00000595242 BTN2A1Q7KYR7 527 aa10.8□□□□□ -0.68
SCAF1-202ENST00000595242 SLC16A14Q7RTX9 510 aa10.8□□□□□ -0.68
SCAF1-202ENST00000595242 COMMD2Q86X83 199 aa10.8□□□□□ -0.68
SCAF1-202ENST00000595242 SKA3Q8IX90 412 aa10.8□□□□□ -0.68
SCAF1-202ENST00000595242 PAQR4Q8N4S7 273 aaPredicted RBP10.8□□□□□ -0.68
SCAF1-202ENST00000595242 GPX8Q8TED1 209 aa10.8□□□□□ -0.68
SCAF1-202ENST00000595242 FAM71F1Q96KD3 344 aaPredicted RBP10.8□□□□□ -0.68
SCAF1-202ENST00000595242 KCNK15Q9H427 330 aa10.8□□□□□ -0.68
SCAF1-202ENST00000595242 RGCCQ9H4X1 137 aa10.8□□□□□ -0.68
SCAF1-202ENST00000595242 C7orf69Q9H7B7 122 aa10.8□□□□□ -0.68
SCAF1-202ENST00000595242 ZNF665Q9H7R5 613 aa10.8□□□□□ -0.68
SCAF1-202ENST00000595242 HRASLSQ9HDD0 168 aa10.8□□□□□ -0.68
SCAF1-202ENST00000595242 ZNF224Q9NZL3 707 aa10.8□□□□□ -0.68
SCAF1-202ENST00000595242 ALG5Q9Y673 324 aa10.8□□□□□ -0.68
SCAF1-202ENST00000595242 IGKV1-9A0A0C4DH69 117 aa10.79□□□□□ -0.68
SCAF1-202ENST00000595242 CCNKO75909 580 aa10.79□□□□□ -0.68
SCAF1-202ENST00000595242 RNASE1P07998 156 aaKnown RBP10.79□□□□□ -0.68
SCAF1-202ENST00000595242 CELA3BP08861 270 aa10.79□□□□□ -0.68
SCAF1-202ENST00000595242 DBHP09172 617 aa10.79□□□□□ -0.68
SCAF1-202ENST00000595242 CSF1P09603 554 aa10.79□□□□□ -0.68
SCAF1-202ENST00000595242 VSIG8P0DPA2 414 aa10.79□□□□□ -0.68
SCAF1-202ENST00000595242 ZNF93P35789 620 aaPredicted RBP10.79□□□□□ -0.68
SCAF1-202ENST00000595242 SLC6A9P48067 706 aa10.79□□□□□ -0.68
SCAF1-202ENST00000595242 ARF1P84077 181 aaKnown RBP10.79□□□□□ -0.68
SCAF1-202ENST00000595242 BAMBIQ13145 260 aa10.79□□□□□ -0.68
SCAF1-202ENST00000595242 SNTB2Q13425 540 aaKnown RBP10.79□□□□□ -0.68
SCAF1-202ENST00000595242 UNC119Q13432 240 aa10.79□□□□□ -0.68
SCAF1-202ENST00000595242 TUSC1Q2TAM9 212 aa10.79□□□□□ -0.68
SCAF1-202ENST00000595242 CRIP3Q6Q6R5 217 aa10.79□□□□□ -0.68
SCAF1-202ENST00000595242 COLCA1Q6ZS62 124 aa10.79□□□□□ -0.68
SCAF1-202ENST00000595242 DPPA2Q7Z7J5 298 aa10.79□□□□□ -0.68
SCAF1-202ENST00000595242 NAA40Q86UY6 237 aa10.79□□□□□ -0.68
SCAF1-202ENST00000595242 MYPOPQ86VE0 399 aaPredicted RBP10.79□□□□□ -0.68
SCAF1-202ENST00000595242 OR1K1Q8NGR3 316 aa10.79□□□□□ -0.68
SCAF1-202ENST00000595242 FGFBP3Q8TAT2 258 aa10.79□□□□□ -0.68
SCAF1-202ENST00000595242 PHF21AQ96BD5 680 aa10.79□□□□□ -0.68
SCAF1-202ENST00000595242 ST6GAL2Q96JF0 529 aa10.79□□□□□ -0.68
SCAF1-202ENST00000595242 ATG5Q9H1Y0 275 aa10.79□□□□□ -0.68
SCAF1-202ENST00000595242 MS4A5Q9H3V2 200 aa10.79□□□□□ -0.68
SCAF1-202ENST00000595242 GHRLQ9UBU3 117 aa10.79□□□□□ -0.68
SCAF1-202ENST00000595242 KLK11Q9UBX7 282 aa10.79□□□□□ -0.68
SCAF1-202ENST00000595242 OPN4Q9UHM6 478 aa10.79□□□□□ -0.68
SCAF1-202ENST00000595242 TRAV18A0A075B6X5 111 aa10.78□□□□□ -0.68
SCAF1-202ENST00000595242 METTL21EPA6NDL7 271 aa10.78□□□□□ -0.68
SCAF1-202ENST00000595242 M0QZ24 198 aa10.78□□□□□ -0.68
SCAF1-202ENST00000595242 M0R233 179 aa10.78□□□□□ -0.68
SCAF1-202ENST00000595242 RAB27BO00194 218 aa10.78□□□□□ -0.68
SCAF1-202ENST00000595242 RBBP9O75884 186 aa10.78□□□□□ -0.68
SCAF1-202ENST00000595242 DHFRP00374 187 aa10.78□□□□□ -0.68
SCAF1-202ENST00000595242 IGKV3-15P01624 115 aa10.78□□□□□ -0.68
SCAF1-202ENST00000595242 MELTFP08582 738 aa10.78□□□□□ -0.68
SCAF1-202ENST00000595242 PRSS3P35030 304 aa10.78□□□□□ -0.68
SCAF1-202ENST00000595242 HTR5AP47898 357 aa10.78□□□□□ -0.68
SCAF1-202ENST00000595242 MECP2P51608 486 aaKnown RBP10.78□□□□□ -0.68
SCAF1-202ENST00000595242 ACTBP60709 375 aa10.78□□□□□ -0.68
SCAF1-202ENST00000595242 FAM189A2Q15884 450 aa10.78□□□□□ -0.68
SCAF1-202ENST00000595242 SNAI3Q3KNW1 292 aa10.78□□□□□ -0.68
SCAF1-202ENST00000595242 TMEM42Q69YG0 159 aa10.78□□□□□ -0.68
SCAF1-202ENST00000595242 AQP3Q92482 292 aa10.78□□□□□ -0.68
SCAF1-202ENST00000595242 BCL2L2Q92843 193 aaPredicted RBP10.78□□□□□ -0.68
SCAF1-202ENST00000595242 FAM46BQ96A09 425 aa10.78□□□□□ -0.68
SCAF1-202ENST00000595242 SPSB4Q96A44 273 aa10.78□□□□□ -0.68
SCAF1-202ENST00000595242 SGK3Q96BR1 496 aa10.78□□□□□ -0.68
SCAF1-202ENST00000595242 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.78□□□□□ -0.68
SCAF1-202ENST00000595242 MRPS28Q9Y2Q9 187 aaKnown RBP10.78□□□□□ -0.68
SCAF1-202ENST00000595242 A0A096LPE4 126 aa10.77□□□□□ -0.69
SCAF1-202ENST00000595242 hCG_38984A0A1B0GV85 526 aa10.77□□□□□ -0.69
SCAF1-202ENST00000595242 A0A1W2PPZ6 126 aa10.77□□□□□ -0.69
SCAF1-202ENST00000595242 XRCC2O43543 280 aa10.77□□□□□ -0.69
SCAF1-202ENST00000595242 MT-ND4P03905 459 aa10.77□□□□□ -0.69
SCAF1-202ENST00000595242 LPLP06858 475 aa10.77□□□□□ -0.69
SCAF1-202ENST00000595242 NAT2P11245 290 aa10.77□□□□□ -0.69
SCAF1-202ENST00000595242 PTHLHP12272 177 aa10.77□□□□□ -0.69
SCAF1-202ENST00000595242 OMGP23515 440 aa10.77□□□□□ -0.69
SCAF1-202ENST00000595242 GATA3P23771 443 aa10.77□□□□□ -0.69
SCAF1-202ENST00000595242 FAUP35544 74 aaKnown RBP10.77□□□□□ -0.69
SCAF1-202ENST00000595242 EIF2B2P49770 351 aaKnown RBP10.77□□□□□ -0.69
SCAF1-202ENST00000595242 ZNF260Q3ZCT1 412 aa10.77□□□□□ -0.69
SCAF1-202ENST00000595242 PABPC1L2AQ5JQF8 200 aa10.77□□□□□ -0.69
SCAF1-202ENST00000595242 TMEM255AQ5JRV8 349 aa10.77□□□□□ -0.69
SCAF1-202ENST00000595242 ATAD3CQ5T2N8 411 aa10.77□□□□□ -0.69
SCAF1-202ENST00000595242 ZBTB37Q5TC79 503 aa10.77□□□□□ -0.69
SCAF1-202ENST00000595242 C17orf107Q6ZR85 190 aa10.77□□□□□ -0.69
SCAF1-202ENST00000595242 FAM169BQ8N8A8 192 aa10.77□□□□□ -0.69
SCAF1-202ENST00000595242 OR56B4Q8NH76 319 aa10.77□□□□□ -0.69
SCAF1-202ENST00000595242 AKR7LQ8NHP1 331 aa10.77□□□□□ -0.69
SCAF1-202ENST00000595242 WFDC12Q8WWY7 111 aa10.77□□□□□ -0.69
SCAF1-202ENST00000595242 SPSB1Q96BD6 273 aa10.77□□□□□ -0.69
SCAF1-202ENST00000595242 RAB39BQ96DA2 213 aa10.77□□□□□ -0.69
SCAF1-202ENST00000595242 SEH1LQ96EE3 360 aa10.77□□□□□ -0.69
SCAF1-202ENST00000595242 NKX3-1Q99801 234 aaPredicted RBP10.77□□□□□ -0.69
SCAF1-202ENST00000595242 MRPL37Q9BZE1 423 aaKnown RBP10.77□□□□□ -0.69
SCAF1-202ENST00000595242 GHITMQ9H3K2 345 aa10.77□□□□□ -0.69
SCAF1-202ENST00000595242 MOV10Q9HCE1 1003 aaKnown RBP10.77□□□□□ -0.69
SCAF1-202ENST00000595242 NUDT15Q9NV35 164 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms