RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 ANGPTL7O43827 346 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 CRTAPO75718 401 aaPredicted RBP11.28□□□□□ -0.6
VRK3-205ENST00000593919 SCGNO76038 276 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 TMEM225BP0DP42 221 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 PTAFRP25105 342 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 GCH1P30793 250 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 MSMPQ1L6U9 139 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 RNASE10Q5GAN6 216 aaKnown RBP11.28□□□□□ -0.6
VRK3-205ENST00000593919 MBNL2Q5VZF2 373 aaKnown RBP11.28□□□□□ -0.6
VRK3-205ENST00000593919 RGS7BPQ6MZT1 257 aaPredicted RBP11.28□□□□□ -0.6
VRK3-205ENST00000593919 OR2W3Q7Z3T1 314 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 CALHM1Q8IU99 346 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 OR10K1Q8NGX5 313 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 OR5P3Q8WZ94 311 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 RADILQ96JH8 1075 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 S100A13Q99584 98 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 TMEM59Q9BXS4 323 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 GHRLQ9UBU3 117 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 ZNF107Q9UII5 783 aaPredicted RBP11.28□□□□□ -0.6
VRK3-205ENST00000593919 ZNF462Q96JM2 2506 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 DPRXA6NFQ7 191 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 SOCS1O15524 211 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 SERPINA2P20848 420 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 KITLGP21583 273 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 GLRXP35754 106 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 RAP2BP61225 183 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 BSPH1Q075Z2 132 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 C4orf17Q53FE4 359 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 OR2AK2Q8NG84 335 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 OR5A2Q8NGI9 324 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 KCNG3Q8TAE7 436 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 CCDC107Q8WV48 283 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 HIST1H2AAQ96QV6 131 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 SLC25A21Q9BQT8 299 aaPredicted RBP11.27□□□□□ -0.61
VRK3-205ENST00000593919 ELL3Q9HB65 397 aaPredicted RBP11.27□□□□□ -0.61
VRK3-205ENST00000593919 ZNF732B4DXR9 585 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 ABCD4O14678 606 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 TIMM8AO60220 97 aaPredicted RBP11.27□□□□□ -0.61
VRK3-205ENST00000593919 SSX5O60225 188 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 PRB1P04280 392 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 MELTFP08582 738 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 HAAOP46952 286 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 GNG2P59768 71 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 PDZK1IP1Q13113 114 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 MEF2DQ14814 521 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 C17orf107Q6ZR85 190 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 ZNF611Q8N823 705 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 RAB3CQ96E17 227 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 CYYR1Q96J86 154 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 ADAT1Q9BUB4 502 aaKnown RBP11.27□□□□□ -0.61
VRK3-205ENST00000593919 DPCDQ9BVM2 203 aaPredicted RBP11.27□□□□□ -0.61
VRK3-205ENST00000593919 CST11Q9H112 138 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 KCNJ16Q9NPI9 418 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 KCNK7Q9Y2U2 307 aa11.27□□□□□ -0.61
VRK3-205ENST00000593919 IGKV1-12A0A0C4DH73 117 aa11.26□□□□□ -0.61
VRK3-205ENST00000593919 OR5B21A6NL26 309 aa11.26□□□□□ -0.61
VRK3-205ENST00000593919 OR2A4O95047 310 aa11.26□□□□□ -0.61
VRK3-205ENST00000593919 IGKV1D-12P01611 117 aa11.26□□□□□ -0.61
VRK3-205ENST00000593919 CHRM2P08172 466 aa11.26□□□□□ -0.61
VRK3-205ENST00000593919 OR4E1P0C645 316 aa11.26□□□□□ -0.61
VRK3-205ENST00000593919 ZNF250P15622 560 aa11.26□□□□□ -0.61
VRK3-205ENST00000593919 HRH1P35367 487 aa11.26□□□□□ -0.61
VRK3-205ENST00000593919 H2BFSP57053 126 aa11.26□□□□□ -0.61
VRK3-205ENST00000593919 TFF3Q07654 80 aa11.26□□□□□ -0.61
VRK3-205ENST00000593919 ATPAF1Q5TC12 328 aaPredicted RBP11.26□□□□□ -0.61
VRK3-205ENST00000593919 C11orf88Q6PI97 169 aa11.26□□□□□ -0.61
VRK3-205ENST00000593919 VHLLQ6RSH7 139 aa11.26□□□□□ -0.61
VRK3-205ENST00000593919 TEX261Q6UWH6 196 aa11.26□□□□□ -0.61
VRK3-205ENST00000593919 OR8G5Q8NG78 346 aa11.26□□□□□ -0.61
VRK3-205ENST00000593919 OR13C8Q8NGS7 320 aa11.26□□□□□ -0.61
VRK3-205ENST00000593919 TMEM171Q8WVE6 324 aa11.26□□□□□ -0.61
VRK3-205ENST00000593919 LRRC46Q96FV0 321 aa11.26□□□□□ -0.61
VRK3-205ENST00000593919 OR2A7Q96R45 310 aa11.26□□□□□ -0.61
VRK3-205ENST00000593919 HEXA-AS1Q9H8Q6 139 aa11.26□□□□□ -0.61
VRK3-205ENST00000593919 U3KQ87 197 aa11.26□□□□□ -0.61
VRK3-205ENST00000593919 CACNA1DQ01668 2161 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 LRBAP50851 2863 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 COL12A1Q99715 3063 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 F5H5P2 479 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 ZG16O60844 167 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 MGMTP16455 207 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 GNG3P63215 75 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 RSU1Q15404 277 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 PLAC9Q5JTB6 97 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 DCAF12L2Q5VW00 463 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 SLC22A25Q6T423 547 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 SLC25A26Q70HW3 274 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 LRP11Q86VZ4 500 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 PXT1Q8NFP0 134 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 OR10AD1Q8NGE0 317 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 OR51T1Q8NGJ9 327 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 OR51F2Q8NH61 342 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 LINC01560Q8TB33 94 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 NUDT16L1Q9BRJ7 211 aaKnown RBP11.25□□□□□ -0.61
VRK3-205ENST00000593919 METTL9Q9H1A3 318 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 NGBQ9NPG2 151 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 VSIG4Q9Y279 399 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 PLEKHA6Q9Y2H5 1048 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 H0YL77 283 aa11.25□□□□□ -0.61
VRK3-205ENST00000593919 MLNRO43193 412 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms