RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 F8VVB4 439 aa10.72□□□□□ -0.69
APOC1-209ENST00000592885 F8VWA3 439 aa10.72□□□□□ -0.69
APOC1-209ENST00000592885 H3BUI4 141 aa10.72□□□□□ -0.69
APOC1-209ENST00000592885 MGST3O14880 152 aa10.72□□□□□ -0.69
APOC1-209ENST00000592885 ALDOBP05062 364 aa10.72□□□□□ -0.69
APOC1-209ENST00000592885 RPSAP08865 295 aaKnown RBP10.72□□□□□ -0.69
APOC1-209ENST00000592885 ZNF20P17024 532 aa10.72□□□□□ -0.69
APOC1-209ENST00000592885 AZGP1P25311 298 aaKnown RBP10.72□□□□□ -0.69
APOC1-209ENST00000592885 POLR2IP36954 125 aaKnown RBP10.72□□□□□ -0.69
APOC1-209ENST00000592885 CCR9P51686 369 aa10.72□□□□□ -0.69
APOC1-209ENST00000592885 OR12D2P58182 307 aa10.72□□□□□ -0.69
APOC1-209ENST00000592885 ACTA2P62736 377 aa10.72□□□□□ -0.69
APOC1-209ENST00000592885 ACTG2P63267 376 aa10.72□□□□□ -0.69
APOC1-209ENST00000592885 GRK1Q15835 563 aa10.72□□□□□ -0.69
APOC1-209ENST00000592885 TP53I3Q53FA7 332 aa10.72□□□□□ -0.69
APOC1-209ENST00000592885 FAM58AQ8N1B3 248 aa10.72□□□□□ -0.69
APOC1-209ENST00000592885 ZNF676Q8N7Q3 588 aa10.72□□□□□ -0.69
APOC1-209ENST00000592885 OR2G2Q8NGZ5 317 aa10.72□□□□□ -0.69
APOC1-209ENST00000592885 MRPL48Q96GC5 212 aaKnown RBP10.72□□□□□ -0.69
APOC1-209ENST00000592885 NEK6Q9HC98 313 aa10.72□□□□□ -0.69
APOC1-209ENST00000592885 FOXJ3Q9UPW0 622 aa10.72□□□□□ -0.69
APOC1-209ENST00000592885 UBE2J1Q9Y385 318 aaPredicted RBP10.72□□□□□ -0.69
APOC1-209ENST00000592885 IGHV2-26A0A0B4J1V2 119 aa10.71□□□□□ -0.69
APOC1-209ENST00000592885 FUOMA2VDF0 154 aa10.71□□□□□ -0.69
APOC1-209ENST00000592885 MEGF11A6BM72 1044 aa10.71□□□□□ -0.69
APOC1-209ENST00000592885 F2RL2O00254 374 aa10.71□□□□□ -0.69
APOC1-209ENST00000592885 SLC16A6O15403 523 aa10.71□□□□□ -0.69
APOC1-209ENST00000592885 ENTPD6O75354 484 aa10.71□□□□□ -0.69
APOC1-209ENST00000592885 FBXO24O75426 580 aa10.71□□□□□ -0.69
APOC1-209ENST00000592885 MT-ND2P03891 347 aa10.71□□□□□ -0.69
APOC1-209ENST00000592885 ALPLP05186 524 aa10.71□□□□□ -0.69
APOC1-209ENST00000592885 VSIG10L2P0DP72 767 aa10.71□□□□□ -0.69
APOC1-209ENST00000592885 ATF1P18846 271 aa10.71□□□□□ -0.69
APOC1-209ENST00000592885 GABRR1P24046 479 aa10.71□□□□□ -0.69
APOC1-209ENST00000592885 PAX6P26367 422 aa10.71□□□□□ -0.69
APOC1-209ENST00000592885 POU3F4P49335 361 aa10.71□□□□□ -0.69
APOC1-209ENST00000592885 SNRPGP62308 76 aaKnown RBP10.71□□□□□ -0.69
APOC1-209ENST00000592885 IL18R1Q13478 541 aa10.71□□□□□ -0.69
APOC1-209ENST00000592885 EDDM3AQ14507 147 aa10.71□□□□□ -0.69
APOC1-209ENST00000592885 SSX2Q16385 188 aa10.71□□□□□ -0.69
APOC1-209ENST00000592885 C16orf82Q7Z2V1 217 aa10.71□□□□□ -0.69
APOC1-209ENST00000592885 DYNAPQ8N1N2 210 aa10.71□□□□□ -0.69
APOC1-209ENST00000592885 RNF166Q96A37 237 aaPredicted RBP10.71□□□□□ -0.69
APOC1-209ENST00000592885 ADAT3Q96EY9 351 aaPredicted RBP10.71□□□□□ -0.69
APOC1-209ENST00000592885 HRASLS5Q96KN8 279 aa10.71□□□□□ -0.69
APOC1-209ENST00000592885 OPALINQ96PE5 141 aa10.71□□□□□ -0.69
APOC1-209ENST00000592885 NKX3-1Q99801 234 aaPredicted RBP10.71□□□□□ -0.69
APOC1-209ENST00000592885 CLEC7AQ9BXN2 247 aa10.71□□□□□ -0.69
APOC1-209ENST00000592885 PRSS22Q9GZN4 317 aa10.71□□□□□ -0.69
APOC1-209ENST00000592885 TMEM133Q9H2Q1 129 aa10.71□□□□□ -0.69
APOC1-209ENST00000592885 GAL3ST2Q9H3Q3 398 aa10.71□□□□□ -0.69
APOC1-209ENST00000592885 SERTAD4Q9NUC0 356 aa10.71□□□□□ -0.69
APOC1-209ENST00000592885 RBFOX1Q9NWB1 397 aaKnown RBP10.71□□□□□ -0.69
APOC1-209ENST00000592885 PCDHGB5Q9Y5G0 923 aa10.71□□□□□ -0.69
APOC1-209ENST00000592885 TGP01266 2768 aa10.71□□□□□ -0.7
APOC1-209ENST00000592885 IGKV1-9A0A0C4DH69 117 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 DAPL1A0PJW8 107 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 SAC3D1A6NKF1 404 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 H3BSH0 61 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 J3QRE1 110 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 PSPNO60542 156 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 IGHA1P01876 353 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 HTR1AP08908 422 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 OCM2P0CE71 109 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 OCMP0CE72 109 aaPredicted RBP10.7□□□□□ -0.7
APOC1-209ENST00000592885 PRKACAP17612 351 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 BCL3P20749 454 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 OR3A1P47881 315 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 MTCP1P56278 107 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 P2RX3P56373 397 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 PDZK1IP1Q13113 114 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 DYNC1I2Q13409 638 aaKnown RBP10.7□□□□□ -0.7
APOC1-209ENST00000592885 PLA1AQ53H76 456 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 LDLRAD2Q5SZI1 272 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 KPRPQ5T749 579 aaPredicted RBP10.7□□□□□ -0.7
APOC1-209ENST00000592885 SAMD5Q5TGI4 173 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 OR52W1Q6IF63 320 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 CCBE1Q6UXH8 406 aaPredicted RBP10.7□□□□□ -0.7
APOC1-209ENST00000592885 RTN4RL2Q86UN3 420 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 SAXO1Q8IYX7 474 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 OR4S1Q8NGB4 309 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 OR52N4Q8NGI2 321 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 WIPF2Q8TF74 440 aaPredicted RBP10.7□□□□□ -0.7
APOC1-209ENST00000592885 RNFT2Q96EX2 444 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 HMG20AQ9NP66 347 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 EXOSC4Q9NPD3 245 aaKnown RBP10.7□□□□□ -0.7
APOC1-209ENST00000592885 FRRS1LQ9P0K9 344 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 IL36RNQ9UBH0 155 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 HHLA2Q9UM44 414 aa10.7□□□□□ -0.7
APOC1-209ENST00000592885 PRKDCP78527 4128 aaKnown RBP10.7□□□□□ -0.7
APOC1-209ENST00000592885 TRGV10A0A0A0MS01 117 aa10.69□□□□□ -0.7
APOC1-209ENST00000592885 E9PQ18 207 aa10.69□□□□□ -0.7
APOC1-209ENST00000592885 SH2D1BO14796 132 aa10.69□□□□□ -0.7
APOC1-209ENST00000592885 XPNPEP2O43895 674 aa10.69□□□□□ -0.7
APOC1-209ENST00000592885 KDM4BO94953 1096 aa10.69□□□□□ -0.7
APOC1-209ENST00000592885 CSN2P05814 226 aa10.69□□□□□ -0.7
APOC1-209ENST00000592885 NPBWR2P48146 333 aa10.69□□□□□ -0.7
APOC1-209ENST00000592885 ARHGDIBP52566 201 aa10.69□□□□□ -0.7
APOC1-209ENST00000592885 EMX1Q04741 257 aaPredicted RBP10.69□□□□□ -0.7
APOC1-209ENST00000592885 MRPL28Q13084 256 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms