RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 A0A1W2PRD5 423 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 A0A1W2PRF3 423 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 A0A1W2PRM7 423 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 F8VVB4 439 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 F8VWA3 439 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 M0R1W7 72 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 FCN3O75636 299 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 ALX3O95076 343 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 IGHV1-69P01742 117 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 TK1P04183 234 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 MMP9P14780 707 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 ZNF44P15621 663 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 CELP19835 753 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 MYF6P23409 242 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 BDKRB2P30411 391 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 VHLP40337 213 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 NPBWR2P48146 333 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 RIPK1Q13546 671 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 EDDM3AQ14507 147 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 RSU1Q15404 277 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 Q499Y3 187 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 YIF1BQ5BJH7 314 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 RUSC1-AS1Q66K80 236 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 DMKNQ6E0U4 476 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-227ENST00000591849 LAIR2Q6ISS4 152 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 PHC2Q8IXK0 858 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 SAXO1Q8IYX7 474 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 NANOGP1Q8N7R0 232 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 C8orf46Q8TAG6 207 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 ZFAND2BQ8WV99 257 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 TNFAIP8L1Q8WVP5 186 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 SNX22Q96L94 193 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 CNBD2Q96M20 576 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 NR1H4Q96RI1 486 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-227ENST00000591849 MND1Q9BWT6 205 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 FAM234AQ9H0X4 552 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 Q9H521 79 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 HMG20AQ9NP66 347 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 EXOSC4Q9NPD3 245 aaKnown RBP8.3□□□□□ -1.08
BRCA1-227ENST00000591849 TMEM138Q9NPI0 162 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 TNFRSF19Q9NS68 423 aa8.3□□□□□ -1.08
BRCA1-227ENST00000591849 A0A1W2PPK0 400 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 FUOMA2VDF0 154 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 K7N7A8 449 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 SIRPB1O00241 398 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 DEGS1O15121 323 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 RGS10O43665 173 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 KDM4BO94953 1096 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 PAHP00439 452 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 LALBAP00709 142 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 CSTBP04080 98 aaKnown RBP8.29□□□□□ -1.08
BRCA1-227ENST00000591849 TGFBR2P37173 567 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 BMXP51813 675 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 MED22Q15528 200 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 GRK1Q15835 563 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 DEFB112Q30KQ8 113 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 SPIN3Q5JUX0 258 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 DDI2Q5TDH0 399 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 NCR3LG1Q68D85 454 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 TMEM200BQ69YZ2 307 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 C1orf122Q6ZSJ8 110 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 C9orf139Q6ZV77 190 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 OR13C5Q8NGS8 318 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 RGP1Q92546 391 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-227ENST00000591849 THRSPQ92748 146 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 GCDHQ92947 438 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-227ENST00000591849 SLC25A28Q96A46 364 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 DUX5Q96PT3 197 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 ANKRD60Q9BZ19 345 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 METTL9Q9H1A3 318 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 METTL8Q9H825 291 aaKnown RBP8.29□□□□□ -1.08
BRCA1-227ENST00000591849 HEXA-AS1Q9H8Q6 139 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 RHOFQ9HBH0 211 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 NOX4Q9NPH5 578 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 PCDHB16Q9NRJ7 776 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 C19orf12Q9NSK7 152 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 FKBP14Q9NWM8 211 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 BLOC1S6Q9UL45 172 aa8.29□□□□□ -1.08
BRCA1-227ENST00000591849 SF3B6Q9Y3B4 125 aaKnown RBP8.29□□□□□ -1.08
BRCA1-227ENST00000591849 SOX21Q9Y651 276 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-227ENST00000591849 IGKV1-12A0A0C4DH73 117 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 hADV38S2A0JD32 116 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 HTR3BO95264 441 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 IGKV1D-12P01611 117 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 ALDOBP05062 364 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 CRYBA1P05813 215 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 HSMCR30P0CW71 290 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 PRTN3P24158 256 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 MAPK3P27361 379 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-227ENST00000591849 ZNF93P35789 620 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-227ENST00000591849 LGALS4P56470 323 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 UBA52P62987 128 aaKnown RBP8.28□□□□□ -1.08
BRCA1-227ENST00000591849 BDH1Q02338 343 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 PRB3Q04118 309 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-227ENST00000591849 SPHARQ15513 63 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 RNLSQ5VYX0 342 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 C12orf54Q6X4T0 127 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 RNF144BQ7Z419 303 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 TRAPPC6BQ86SZ2 158 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 OR8H2Q8N162 312 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms