RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 BLVRBP30043 206 aaPredicted RBP13.29□□□□□ -0.28
CIRBP-228ENST00000590347 CMPK1P30085 196 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 FOXF1Q12946 379 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 ELAVL3Q14576 367 aaKnown RBP13.29□□□□□ -0.28
CIRBP-228ENST00000590347 DNLZQ5SXM8 178 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 KCTD18Q6PI47 426 aaPredicted RBP13.29□□□□□ -0.28
CIRBP-228ENST00000590347 C6orf201Q7Z4U5 140 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 NRSN1Q8IZ57 195 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 BATF2Q8N1L9 274 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 OR5C1Q8NGR4 320 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 TMEM18Q96B42 140 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 C8orf44Q96CB5 159 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 NKX2-4Q9H2Z4 354 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 G6PC2Q9NQR9 355 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 DKKL1Q9UK85 242 aa13.29□□□□□ -0.28
CIRBP-228ENST00000590347 IGSF23A1L1A6 192 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 GRIFINA4D1Z8 144 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 MEGF11A6BM72 1044 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 NUDT21O43809 227 aaKnown RBP13.28□□□□□ -0.28
CIRBP-228ENST00000590347 BMP5P22003 454 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 GABRR1P24046 479 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 CHRNB4P30926 498 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 GPR157Q5UAW9 335 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 AGBL4Q5VU57 503 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 PARM1Q6UWI2 310 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 SYT13Q7L8C5 426 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 WDFY1Q8IWB7 410 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 SLC22A24Q8N4F4 322 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 LFNGQ8NES3 379 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 RNF150Q9ULK6 438 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 A0A1B0GU03 582 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 SERINC4A6NH21 518 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 CEBPZOSA8MTT3 80 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 KAT7O95251 611 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 FAM3BP58499 235 aaPredicted RBP13.28□□□□□ -0.28
CIRBP-228ENST00000590347 ZFP36L1Q07352 338 aaKnown RBP13.28□□□□□ -0.28
CIRBP-228ENST00000590347 C1orf194Q5T5A4 169 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 FAM90A2PQ658T7 463 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 CLDND2Q8NHS1 167 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 RNASEH2CQ8TDP1 164 aaKnown RBP13.28□□□□□ -0.28
CIRBP-228ENST00000590347 ARV1Q9H2C2 271 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 CDH20Q9HBT6 801 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 VPS13AQ96RL7 3174 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 IGKV1D-43A0A0B4J1Z2 117 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 TMEM210A6NLX4 147 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 HCRTR1O43613 425 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 TMEM225BP0DP42 221 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 NKX2-1P43699 371 aaPredicted RBP13.28□□□□□ -0.28
CIRBP-228ENST00000590347 PDCD1Q15116 288 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 ERN2Q76MJ5 926 aaKnown RBP13.28□□□□□ -0.28
CIRBP-228ENST00000590347 MS4A10Q96PG2 267 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 ALKBH3Q96Q83 286 aaPredicted RBP13.28□□□□□ -0.28
CIRBP-228ENST00000590347 VSIRQ9H7M9 311 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 KIAA1456Q9P272 454 aa13.28□□□□□ -0.28
CIRBP-228ENST00000590347 PPP5D1E7EU14 171 aa13.27□□□□□ -0.28
CIRBP-228ENST00000590347 CDC14BO60729 498 aa13.27□□□□□ -0.28
CIRBP-228ENST00000590347 GPR75O95800 540 aa13.27□□□□□ -0.28
CIRBP-228ENST00000590347 POU2F2P09086 479 aa13.27□□□□□ -0.28
CIRBP-228ENST00000590347 IL11P20809 199 aa13.27□□□□□ -0.28
CIRBP-228ENST00000590347 CLEC2AQ6UVW9 174 aa13.27□□□□□ -0.28
CIRBP-228ENST00000590347 FAM57BQ71RH2 274 aa13.27□□□□□ -0.28
CIRBP-228ENST00000590347 SLC16A14Q7RTX9 510 aa13.27□□□□□ -0.28
CIRBP-228ENST00000590347 YAF2Q8IY57 180 aa13.27□□□□□ -0.28
CIRBP-228ENST00000590347 OR2L8Q8NGY9 312 aa13.27□□□□□ -0.28
CIRBP-228ENST00000590347 OR52N5Q8NH56 324 aa13.27□□□□□ -0.28
CIRBP-228ENST00000590347 TWSG1Q9GZX9 223 aa13.27□□□□□ -0.28
CIRBP-228ENST00000590347 V9GYS6 101 aa13.27□□□□□ -0.28
CIRBP-228ENST00000590347 EDDM13A0A1B0GTR0 161 aa13.27□□□□□ -0.29
CIRBP-228ENST00000590347 FAM230AA0A1W2PPH8 454 aa13.27□□□□□ -0.29
CIRBP-228ENST00000590347 DDAH2O95865 285 aa13.27□□□□□ -0.29
CIRBP-228ENST00000590347 VAX1Q5SQQ9 334 aa13.27□□□□□ -0.29
CIRBP-228ENST00000590347 RABEPKQ7Z6M1 372 aa13.27□□□□□ -0.29
CIRBP-228ENST00000590347 OR10S1Q8NGN2 331 aa13.27□□□□□ -0.29
CIRBP-228ENST00000590347 VN1R17PQ8TDU5 208 aa13.27□□□□□ -0.29
CIRBP-228ENST00000590347 THAP3Q8WTV1 239 aaPredicted RBP13.27□□□□□ -0.29
CIRBP-228ENST00000590347 MRGPRX4Q96LA9 322 aa13.27□□□□□ -0.29
CIRBP-228ENST00000590347 TP53RKQ96S44 253 aa13.27□□□□□ -0.29
CIRBP-228ENST00000590347 RTN4RQ9BZR6 473 aa13.27□□□□□ -0.29
CIRBP-228ENST00000590347 KLHL13Q9P2N7 655 aa13.27□□□□□ -0.29
CIRBP-228ENST00000590347 THAP10Q9P2Z0 257 aaPredicted RBP13.27□□□□□ -0.29
CIRBP-228ENST00000590347 SELENOKQ9Y6D0 94 aa13.27□□□□□ -0.29
CIRBP-228ENST00000590347 R4GMQ9 66 aa13.27□□□□□ -0.29
CIRBP-228ENST00000590347 SCDO00767 359 aa13.26□□□□□ -0.29
CIRBP-228ENST00000590347 TMEM11P17152 192 aa13.26□□□□□ -0.29
CIRBP-228ENST00000590347 DLX2Q07687 328 aaPredicted RBP13.26□□□□□ -0.29
CIRBP-228ENST00000590347 ZNF154Q13106 437 aa13.26□□□□□ -0.29
CIRBP-228ENST00000590347 RUNX3Q13761 415 aa13.26□□□□□ -0.29
CIRBP-228ENST00000590347 TESK1Q15569 626 aa13.26□□□□□ -0.29
CIRBP-228ENST00000590347 SLC25A24Q6NUK1 477 aa13.26□□□□□ -0.29
CIRBP-228ENST00000590347 NUP54Q7Z3B4 507 aa13.26□□□□□ -0.29
CIRBP-228ENST00000590347 LHFPL1Q86WI0 220 aa13.26□□□□□ -0.29
CIRBP-228ENST00000590347 SFTPA2Q8IWL1 248 aa13.26□□□□□ -0.29
CIRBP-228ENST00000590347 OR9A4Q8NGU2 314 aa13.26□□□□□ -0.29
CIRBP-228ENST00000590347 EMG1Q92979 244 aaKnown RBP13.26□□□□□ -0.29
CIRBP-228ENST00000590347 RCC1LQ96I51 464 aaKnown RBP13.26□□□□□ -0.29
CIRBP-228ENST00000590347 MTIF3Q9H2K0 278 aaKnown RBP13.26□□□□□ -0.29
CIRBP-228ENST00000590347 PRSS37A4D1T9 235 aa13.26□□□□□ -0.29
CIRBP-228ENST00000590347 FIGNL2A6NMB9 653 aa13.26□□□□□ -0.29
CIRBP-228ENST00000590347 SLC31A1O15431 190 aa13.26□□□□□ -0.29
CIRBP-228ENST00000590347 NKX2-2O95096 273 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms