RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 DUX4L2P0CJ85 424 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 DUX4L3P0CJ86 424 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 DUX4L4P0CJ87 422 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 DUX4L5P0CJ88 424 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 DUX4L6P0CJ89 424 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 DUX4L7P0CJ90 424 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 HSMCR30P0CW71 290 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 PGA5P0DJD9 388 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 PPIAL4GP0DN37 164 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 CPEP16870 476 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 PRKACBP22694 351 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 FGF12P61328 243 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 GPR50Q13585 617 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 TPBGQ13641 420 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 CDK5R1Q15078 307 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 UBE2V2Q15819 145 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 ATPAF1Q5TC12 328 aaPredicted RBP8.58□□□□□ -1.04
SDF2-208ENST00000589788 RPL22L1Q6P5R6 122 aaKnown RBP8.58□□□□□ -1.04
SDF2-208ENST00000589788 DUX4L9Q6RFH8 374 aaPredicted RBP8.58□□□□□ -1.04
SDF2-208ENST00000589788 ACP7Q6ZNF0 438 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 GPR141Q7Z602 305 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 ANGPTL5Q86XS5 388 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 OR13F1Q8NGS4 319 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 OR10AC1Q8NH08 325 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 RPS4Y2Q8TD47 263 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 H1FXQ92522 213 aaKnown RBP8.58□□□□□ -1.04
SDF2-208ENST00000589788 UFD1Q92890 307 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 DACT3Q96B18 629 aaPredicted RBP8.58□□□□□ -1.04
SDF2-208ENST00000589788 UPRTQ96BW1 309 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 ADAT3Q96EY9 351 aaPredicted RBP8.58□□□□□ -1.04
SDF2-208ENST00000589788 ZNF488Q96MN9 340 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 SUCNR1Q9BXA5 334 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 NEK6Q9HC98 313 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 DUX4Q9UBX2 424 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 NUP50Q9UKX7 468 aa8.58□□□□□ -1.04
SDF2-208ENST00000589788 ZNF879B4DU55 563 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 ZNF561-AS1K7EIQ3 104 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 CCRL2O00421 344 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 SIGLEC5O15389 551 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 NOS1APO75052 506 aaPredicted RBP8.57□□□□□ -1.04
SDF2-208ENST00000589788 TOX4O94842 621 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 ZFPL1O95159 310 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 CYB5AP00167 134 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 TFF1P04155 84 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 CD1AP06126 327 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 ACAA1P09110 424 aaPredicted RBP8.57□□□□□ -1.04
SDF2-208ENST00000589788 PSG2P11465 335 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 SELLP14151 372 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 NDUFB7P17568 137 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 ATF1P18846 271 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 AMY2BP19961 511 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 MPZP25189 248 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 RBP2P50120 134 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 GTF2A1P52655 376 aaPredicted RBP8.57□□□□□ -1.04
SDF2-208ENST00000589788 CAPZA1P52907 286 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 ATP1B3P54709 279 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 SRSF2Q01130 221 aaKnown RBP8.57□□□□□ -1.04
SDF2-208ENST00000589788 IL24Q13007 206 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 METTL11BQ5VVY1 283 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 DMKNQ6E0U4 476 aaPredicted RBP8.57□□□□□ -1.04
SDF2-208ENST00000589788 RBMS3Q6XE24 437 aaKnown RBP8.57□□□□□ -1.04
SDF2-208ENST00000589788 ZNF788Q6ZQV5 615 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 UTS2BQ765I0 119 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 CALHM1Q8IU99 346 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 PHC2Q8IXK0 858 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 BATF2Q8N1L9 274 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 FGFRL1Q8N441 504 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 DNAAF1Q8NEP3 725 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 OR51A4Q8NGJ6 313 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 TSEN15Q8WW01 171 aaKnown RBP8.57□□□□□ -1.04
SDF2-208ENST00000589788 C22orf15Q8WYQ4 148 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 SPSB1Q96BD6 273 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 SMIM19Q96E16 107 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 GAFA1Q96PS6 74 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 SLC6A7Q99884 636 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 PDCD1LG2Q9BQ51 273 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 NRIP2Q9BQI9 281 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 PCGF1Q9BSM1 259 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 MS4A7Q9GZW8 240 aaPredicted RBP8.57□□□□□ -1.04
SDF2-208ENST00000589788 NDUFB11Q9NX14 153 aa8.57□□□□□ -1.04
SDF2-208ENST00000589788 SLC25A10Q9UBX3 287 aaPredicted RBP8.57□□□□□ -1.04
SDF2-208ENST00000589788 RPUSD1Q9UJJ7 312 aaKnown RBP8.57□□□□□ -1.04
SDF2-208ENST00000589788 MXRA5Q9NR99 2828 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 IGKV1D-17A0A075B6S4 117 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 IGHV3OR16-10A0A075B7F0 116 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 TRAV40A0A0B4J280 105 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 RFPL4AA6NLU0 287 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 RFPL4AL1F8VTS6 287 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 FCN3O75636 299 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 CELP19835 753 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 AZGP1P25311 298 aaKnown RBP8.56□□□□□ -1.04
SDF2-208ENST00000589788 TGFBR2P37173 567 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 POU3F4P49335 361 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 MTCP1P56278 107 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 SSX1Q16384 188 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 DGUOKQ16854 277 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 KLF17Q5JT82 389 aaPredicted RBP8.56□□□□□ -1.04
SDF2-208ENST00000589788 GPR157Q5UAW9 335 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 LIPKQ5VXJ0 399 aa8.56□□□□□ -1.04
SDF2-208ENST00000589788 SLC25A26Q70HW3 274 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms