RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 C4orf17Q53FE4 359 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 ESCO2Q56NI9 601 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 NHLRC3Q5JS37 347 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 FBXW9Q5XUX1 488 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 C11orf87Q6NUJ2 197 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 RPUSD3Q6P087 351 aaKnown RBP8.58□□□□□ -1.04
VPS25-202ENST00000589219 NUFIP2Q7Z417 695 aaKnown RBP8.58□□□□□ -1.04
VPS25-202ENST00000589219 P4HA3Q7Z4N8 544 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 C6orf201Q7Z4U5 140 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 SLC51BQ86UW2 128 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 CCDC36Q8IYA8 594 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 KCNRGQ8N5I3 272 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 RBMXL3Q8N7X1 1067 aaKnown RBP8.58□□□□□ -1.04
VPS25-202ENST00000589219 ADAD2Q8NCV1 583 aaKnown RBP8.58□□□□□ -1.04
VPS25-202ENST00000589219 Q8NFD4 153 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 OR6K3Q8NGY3 331 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 SCARB1Q8WTV0 552 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 CASTOR1Q8WTX7 329 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 PIGCQ92535 297 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 TMEM230Q96A57 120 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 WDR89Q96FK6 387 aaPredicted RBP8.58□□□□□ -1.04
VPS25-202ENST00000589219 GMPPAQ96IJ6 420 aaPredicted RBP8.58□□□□□ -1.04
VPS25-202ENST00000589219 POM121L2Q96KW2 1035 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 ST6GALNAC5Q9BVH7 336 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 PAPOLGQ9BWT3 736 aaKnown RBP8.58□□□□□ -1.04
VPS25-202ENST00000589219 GSX2Q9BZM3 304 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 NMES1Q9C002 83 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 C5orf66Q9H5L9 145 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 NECAP2Q9NVZ3 263 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 ANXA10Q9UJ72 324 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 UTP20O75691 2785 aaKnown RBP8.57□□□□□ -1.04
VPS25-202ENST00000589219 TRAV17A0A0B4J275 112 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 IGKV1-12A0A0C4DH73 117 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 A0A1B0GW55 424 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 KANTRA0A1W2PQU2 76 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 ZNF850A8MQ14 1090 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 CCSO14618 274 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 BCL2L11O43521 198 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 PLATP00750 562 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 IGKV1D-12P01611 117 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 CTSDP07339 412 aaPredicted RBP8.57□□□□□ -1.04
VPS25-202ENST00000589219 FCGR3AP08637 254 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 DUX4L2P0CJ85 424 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 DUX4L3P0CJ86 424 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 DUX4L4P0CJ87 422 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 DUX4L5P0CJ88 424 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 DUX4L6P0CJ89 424 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 DUX4L7P0CJ90 424 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 PGAM2P15259 253 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 CALCRP30988 508 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 RAB1AP62820 205 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 PRDX4Q13162 271 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 TAF9Q16594 264 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 CEACAM21Q3KPI0 293 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 DMRTC1Q5HYR2 192 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 C9orf135Q5VTT2 229 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 AADACL3Q5VUY0 350 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 DMRTA1Q5VZB9 504 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 SIGIRRQ6IA17 410 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 ELP2Q6IA86 826 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 IGFL3Q6UXB1 125 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 LINC00596Q86U02 117 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 TMEM200AQ86VY9 491 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 ZADH2Q8N4Q0 377 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 ZNF611Q8N823 705 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 Q8NA96 180 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 OR5L1Q8NGL2 311 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 THAP6Q8TBB0 222 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 DEFB127Q9H1M4 99 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 ZNF286AQ9HBT8 521 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 C12orf4Q9NQ89 552 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 MED9Q9NWA0 146 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 CLCF1Q9UBD9 225 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 DUX4Q9UBX2 424 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 AK3Q9UIJ7 227 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 GPR160Q9UJ42 338 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 TNFSF18Q9UNG2 199 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 ICE1Q9Y2F5 2266 aa8.57□□□□□ -1.04
VPS25-202ENST00000589219 SPTAN1Q13813 2472 aaKnown RBP8.57□□□□□ -1.04
VPS25-202ENST00000589219 OR5B21A6NL26 309 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 ANKRD30BLA7E2S9 258 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 LEUTXA8MZ59 168 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 AQP7O14520 342 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 CNOT4O95628 575 aaKnown RBP8.56□□□□□ -1.04
VPS25-202ENST00000589219 IL18BPO95998 194 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 CFDP00746 253 aaPredicted RBP8.56□□□□□ -1.04
VPS25-202ENST00000589219 CRHP06850 196 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 PET100P0DJ07 73 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 CCNOP22674 350 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 SERPINF1P36955 418 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 GLP1RP43220 463 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 FGF12P61328 243 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 SRSF7Q16629 238 aaKnown RBP eCLIP8.56□□□□□ -1.04
VPS25-202ENST00000589219 MPV17LQ2QL34 196 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 TMEM211Q6ICI0 200 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 KCTD9Q7L273 389 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 ZNF546Q86UE3 836 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 COMMD7Q86VX2 200 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 MKXQ8IYA7 352 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 FBXL14Q8N1E6 418 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms