RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 COQ3Q9NZJ6 369 aa12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 GSKIPQ9P0R6 139 aa12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 BOKQ9UMX3 212 aaPredicted RBP12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 DOPEY2Q9Y3R5 2298 aa12.22□□□□□ -0.45
NEDD4L-223ENST00000588516 KIAA1549Q9HCM3 1950 aa12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 F8W036 122 aa12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 DNASE2O00115 360 aaPredicted RBP12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 CDK2AP1O14519 115 aa12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 ADAP1O75689 374 aa12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 KNG1P01042 644 aa12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 SERPINA7P05543 415 aa12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 HOXB5P09067 269 aa12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 RPL12P30050 165 aaKnown RBP12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 HTR5AP47898 357 aa12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 RAB5CP51148 216 aa12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 B3GALT5-AS1P59052 145 aa12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 FAM3AP98173 230 aa12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 RAB32Q13637 225 aa12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 RBM39Q14498 530 aaKnown RBP12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 SWI5Q1ZZU3 235 aa12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 ABLIM2Q6H8Q1 611 aa12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 H3F3CQ6NXT2 135 aa12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 C1QL2Q7Z5L3 287 aa12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 SAXO1Q8IYX7 474 aa12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 LGI3Q8N145 548 aa12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 UCN2Q96RP3 112 aa12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 LINC00470Q9BZP3 86 aa12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 STRADBQ9C0K7 418 aa12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 NAA60Q9H7X0 242 aa12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 TREM1Q9NP99 234 aa12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 ABI3Q9P2A4 366 aa12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 B4GALT7Q9UBV7 327 aa12.21□□□□□ -0.45
NEDD4L-223ENST00000588516 IGHV3-15A0A0B4J1V0 119 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 FAM230AA0A1W2PPH8 454 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 H0YIZ8 118 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 TRIM77I1YAP6 450 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 CYTIPO60759 359 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 PDCD6O75340 191 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 DEDDO75618 318 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 COX5BP10606 129 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 TCN2P20062 427 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 CHATP28329 748 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 SULT1A2P50226 295 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 CAV2P51636 162 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 F2RL1P55085 397 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 CLDN15P56746 228 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 HERV-K104P61576 105 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 IL13RA2Q14627 380 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 HAGHLQ6PII5 290 aaPredicted RBP12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 RNF144BQ7Z419 303 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 C6orf201Q7Z4U5 140 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 DPPA2Q7Z7J5 298 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 TMED6Q8WW62 240 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 OR10C1Q96KK4 312 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 FOXB1Q99853 325 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 SPIN2AQ99865 258 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 MICU1Q9BPX6 476 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 SPIN2BQ9BPZ2 258 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 OR2H1Q9GZK4 316 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 PRDM14Q9GZV8 571 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 OPA3Q9H6K4 179 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 CRLF2Q9HC73 371 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 FAM212BQ9NTI7 297 aaPredicted RBP12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 OR5AC2Q9NZP5 309 aa12.2□□□□□ -0.46
NEDD4L-223ENST00000588516 CCDC187A0A096LP49 1063 aa12.19□□□□□ -0.46
NEDD4L-223ENST00000588516 ZNF716A6NP11 495 aa12.19□□□□□ -0.46
NEDD4L-223ENST00000588516 TERTO14746 1132 aaKnown RBP12.19□□□□□ -0.46
NEDD4L-223ENST00000588516 FCGR3AP08637 254 aa12.19□□□□□ -0.46
NEDD4L-223ENST00000588516 CTXN2P0C2S0 81 aa12.19□□□□□ -0.46
NEDD4L-223ENST00000588516 FAM157CP0CG43 387 aa12.19□□□□□ -0.46
NEDD4L-223ENST00000588516 HKR1P10072 659 aa12.19□□□□□ -0.46
NEDD4L-223ENST00000588516 FUT3P21217 361 aa12.19□□□□□ -0.46
NEDD4L-223ENST00000588516 DUSP1P28562 367 aa12.19□□□□□ -0.46
NEDD4L-223ENST00000588516 PTGER4P35408 488 aa12.19□□□□□ -0.46
NEDD4L-223ENST00000588516 CYB561P49447 251 aa12.19□□□□□ -0.46
NEDD4L-223ENST00000588516 FAM76BQ5HYJ3 339 aa12.19□□□□□ -0.46
NEDD4L-223ENST00000588516 ZNF774Q6NX45 483 aa12.19□□□□□ -0.46
NEDD4L-223ENST00000588516 CRIP3Q6Q6R5 217 aa12.19□□□□□ -0.46
NEDD4L-223ENST00000588516 C6orf15Q6UXA7 325 aaPredicted RBP12.19□□□□□ -0.46
NEDD4L-223ENST00000588516 Q6ZS49 121 aa12.19□□□□□ -0.46
NEDD4L-223ENST00000588516 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.19□□□□□ -0.46
NEDD4L-223ENST00000588516 UBAC2Q8NBM4 344 aa12.19□□□□□ -0.46
NEDD4L-223ENST00000588516 SPSB4Q96A44 273 aa12.19□□□□□ -0.46
NEDD4L-223ENST00000588516 RRNAD1Q96FB5 475 aaKnown RBP12.19□□□□□ -0.46
NEDD4L-223ENST00000588516 ABHD14BQ96IU4 210 aa12.19□□□□□ -0.46
NEDD4L-223ENST00000588516 SRXN1Q9BYN0 137 aa12.19□□□□□ -0.46
NEDD4L-223ENST00000588516 AKIRIN1Q9H9L7 192 aaPredicted RBP12.19□□□□□ -0.46
NEDD4L-223ENST00000588516 GPR35Q9HC97 309 aa12.19□□□□□ -0.46
NEDD4L-223ENST00000588516 AK3Q9UIJ7 227 aa12.19□□□□□ -0.46
NEDD4L-223ENST00000588516 TMED3Q9Y3Q3 217 aa12.19□□□□□ -0.46
NEDD4L-223ENST00000588516 ATMQ13315 3056 aa12.19□□□□□ -0.46
NEDD4L-223ENST00000588516 DUXBA0A1W2PPF3 345 aa12.18□□□□□ -0.46
NEDD4L-223ENST00000588516 E9PLN8 166 aa12.18□□□□□ -0.46
NEDD4L-223ENST00000588516 ATP6V1G2-DDX39BF2Z307 99 aa12.18□□□□□ -0.46
NEDD4L-223ENST00000588516 H7C1Q1 480 aa12.18□□□□□ -0.46
NEDD4L-223ENST00000588516 GPR137BO60478 399 aa12.18□□□□□ -0.46
NEDD4L-223ENST00000588516 DIRAS3O95661 229 aa12.18□□□□□ -0.46
NEDD4L-223ENST00000588516 CELA2AP08217 269 aa12.18□□□□□ -0.46
NEDD4L-223ENST00000588516 H2AFB1P0C5Y9 115 aa12.18□□□□□ -0.46
NEDD4L-223ENST00000588516 ZNF32P17041 273 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms