RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 IGHA1P01876 353 aa17.75■□□□□ 0.43
CIRBP-219ENST00000588411 CCDC159P0C7I6 412 aa17.75■□□□□ 0.43
CIRBP-219ENST00000588411 BCL3P20749 454 aa17.75■□□□□ 0.43
CIRBP-219ENST00000588411 GABRR1P24046 479 aa17.75■□□□□ 0.43
CIRBP-219ENST00000588411 PDZK1IP1Q13113 114 aa17.75■□□□□ 0.43
CIRBP-219ENST00000588411 EDDM3AQ14507 147 aa17.75■□□□□ 0.43
CIRBP-219ENST00000588411 ZNF782Q6ZMW2 699 aaPredicted RBP17.75■□□□□ 0.43
CIRBP-219ENST00000588411 C11orf42Q8N5U0 333 aa17.75■□□□□ 0.43
CIRBP-219ENST00000588411 ZNF555Q8NEP9 628 aa17.75■□□□□ 0.43
CIRBP-219ENST00000588411 ZNF714Q96N38 554 aa17.75■□□□□ 0.43
CIRBP-219ENST00000588411 RDH12Q96NR8 316 aa17.75■□□□□ 0.43
CIRBP-219ENST00000588411 CITED1Q99966 193 aa17.75■□□□□ 0.43
CIRBP-219ENST00000588411 COMMD4Q9H0A8 199 aa17.75■□□□□ 0.43
CIRBP-219ENST00000588411 MEGF9Q9H1U4 602 aa17.75■□□□□ 0.43
CIRBP-219ENST00000588411 PPA2Q9H2U2 334 aa17.75■□□□□ 0.43
CIRBP-219ENST00000588411 RBFOX1Q9NWB1 397 aaKnown RBP17.75■□□□□ 0.43
CIRBP-219ENST00000588411 FAM118AQ9NWS6 357 aa17.75■□□□□ 0.43
CIRBP-219ENST00000588411 TMEM212A6NML5 194 aa17.74■□□□□ 0.43
CIRBP-219ENST00000588411 M0QZ24 198 aa17.74■□□□□ 0.43
CIRBP-219ENST00000588411 TSPAN9O75954 239 aa17.74■□□□□ 0.43
CIRBP-219ENST00000588411 MT-ND2P03891 347 aa17.74■□□□□ 0.43
CIRBP-219ENST00000588411 PRKACAP17612 351 aa17.74■□□□□ 0.43
CIRBP-219ENST00000588411 GBX2P52951 348 aaPredicted RBP17.74■□□□□ 0.43
CIRBP-219ENST00000588411 GRK1Q15835 563 aa17.74■□□□□ 0.43
CIRBP-219ENST00000588411 ZSCAN26Q16670 478 aa17.74■□□□□ 0.43
CIRBP-219ENST00000588411 KLHL22Q53GT1 634 aa17.74■□□□□ 0.43
CIRBP-219ENST00000588411 OR13C9Q8NGT0 318 aa17.74■□□□□ 0.43
CIRBP-219ENST00000588411 C17orf50Q8WW18 174 aa17.74■□□□□ 0.43
CIRBP-219ENST00000588411 FOXRED1Q96CU9 486 aaPredicted RBP17.74■□□□□ 0.43
CIRBP-219ENST00000588411 ZCCHC4Q9H5U6 513 aa17.74■□□□□ 0.43
CIRBP-219ENST00000588411 AMBNQ9NP70 447 aa17.74■□□□□ 0.43
CIRBP-219ENST00000588411 ERVK13-1Q9NX77 482 aa17.74■□□□□ 0.43
CIRBP-219ENST00000588411 MYRFQ9Y2G1 1151 aa17.74■□□□□ 0.43
CIRBP-219ENST00000588411 TMEM82A0PJX8 343 aa17.73■□□□□ 0.43
CIRBP-219ENST00000588411 NPBWR2P48146 333 aa17.73■□□□□ 0.43
CIRBP-219ENST00000588411 BMXP51813 675 aa17.73■□□□□ 0.43
CIRBP-219ENST00000588411 DLX6P56179 175 aa17.73■□□□□ 0.43
CIRBP-219ENST00000588411 PROK1P58294 105 aa17.73■□□□□ 0.43
CIRBP-219ENST00000588411 SRSF4Q08170 494 aaKnown RBP17.73■□□□□ 0.43
CIRBP-219ENST00000588411 ZNF146Q15072 292 aa17.73■□□□□ 0.43
CIRBP-219ENST00000588411 DTX3Q8N9I9 347 aa17.73■□□□□ 0.43
CIRBP-219ENST00000588411 OR51A4Q8NGJ6 313 aa17.73■□□□□ 0.43
CIRBP-219ENST00000588411 OR5D14Q8NGL3 314 aa17.73■□□□□ 0.43
CIRBP-219ENST00000588411 OR10AC1Q8NH08 325 aa17.73■□□□□ 0.43
CIRBP-219ENST00000588411 OR5AK2Q8NH90 309 aa17.73■□□□□ 0.43
CIRBP-219ENST00000588411 RHOFQ9HBH0 211 aa17.73■□□□□ 0.43
CIRBP-219ENST00000588411 MRPS18AQ9NVS2 196 aaKnown RBP17.73■□□□□ 0.43
CIRBP-219ENST00000588411 SMPD3Q9NY59 655 aaPredicted RBP17.73■□□□□ 0.43
CIRBP-219ENST00000588411 SH2D1BO14796 132 aa17.72■□□□□ 0.43
CIRBP-219ENST00000588411 MGST3O14880 152 aa17.72■□□□□ 0.43
CIRBP-219ENST00000588411 ARG1P05089 322 aa17.72■□□□□ 0.43
CIRBP-219ENST00000588411 LIAT1Q6ZQX7 453 aa17.72■□□□□ 0.43
CIRBP-219ENST00000588411 SERPINA12Q8IW75 414 aa17.72■□□□□ 0.43
CIRBP-219ENST00000588411 OR52I1Q8NGK6 324 aa17.72■□□□□ 0.43
CIRBP-219ENST00000588411 OR4C13Q8NGP0 309 aa17.72■□□□□ 0.43
CIRBP-219ENST00000588411 TSEN15Q8WW01 171 aaKnown RBP17.72■□□□□ 0.43
CIRBP-219ENST00000588411 RFT1Q96AA3 541 aa17.72■□□□□ 0.43
CIRBP-219ENST00000588411 CPNE2Q96FN4 548 aaPredicted RBP17.72■□□□□ 0.43
CIRBP-219ENST00000588411 AJUBAQ96IF1 538 aa17.72■□□□□ 0.43
CIRBP-219ENST00000588411 ISG20L2Q9H9L3 353 aaKnown RBP17.72■□□□□ 0.43
CIRBP-219ENST00000588411 HMG20AQ9NP66 347 aa17.72■□□□□ 0.43
CIRBP-219ENST00000588411 EXOSC4Q9NPD3 245 aaKnown RBP17.72■□□□□ 0.43
CIRBP-219ENST00000588411 IL36RNQ9UBH0 155 aa17.72■□□□□ 0.43
CIRBP-219ENST00000588411 DHDHQ9UQ10 334 aa17.72■□□□□ 0.43
CIRBP-219ENST00000588411 TBL2Q9Y4P3 447 aaKnown RBP17.72■□□□□ 0.43
CIRBP-219ENST00000588411 LINC00312Q9Y6C7 94 aa17.72■□□□□ 0.43
CIRBP-219ENST00000588411 FUOMA2VDF0 154 aa17.71■□□□□ 0.43
CIRBP-219ENST00000588411 HCKP08631 526 aa17.71■□□□□ 0.43
CIRBP-219ENST00000588411 IGHV1-8P0DP01 117 aa17.71■□□□□ 0.43
CIRBP-219ENST00000588411 DUSP1P28562 367 aa17.71■□□□□ 0.43
CIRBP-219ENST00000588411 GABRA5P31644 462 aa17.71■□□□□ 0.43
CIRBP-219ENST00000588411 SNU13P55769 128 aaKnown RBP17.71■□□□□ 0.43
CIRBP-219ENST00000588411 LY6EQ16553 131 aa17.71■□□□□ 0.43
CIRBP-219ENST00000588411 LPCAT4Q643R3 524 aa17.71■□□□□ 0.43
CIRBP-219ENST00000588411 SAXO1Q8IYX7 474 aa17.71■□□□□ 0.43
CIRBP-219ENST00000588411 CHST6Q9GZX3 395 aa17.71■□□□□ 0.43
CIRBP-219ENST00000588411 TCF7L1Q9HCS4 588 aa17.71■□□□□ 0.43
CIRBP-219ENST00000588411 IRGMA1A4Y4 181 aa17.7■□□□□ 0.42
CIRBP-219ENST00000588411 KDM4BO94953 1096 aa17.7■□□□□ 0.42
CIRBP-219ENST00000588411 ALX3O95076 343 aa17.7■□□□□ 0.42
CIRBP-219ENST00000588411 ZFPL1O95159 310 aa17.7■□□□□ 0.42
CIRBP-219ENST00000588411 DYNC1I2Q13409 638 aaKnown RBP17.7■□□□□ 0.42
CIRBP-219ENST00000588411 C11orf88Q6PI97 169 aa17.7■□□□□ 0.42
CIRBP-219ENST00000588411 TRAPPC6BQ86SZ2 158 aa17.7■□□□□ 0.42
CIRBP-219ENST00000588411 OR11H6Q8NGC7 330 aa17.7■□□□□ 0.42
CIRBP-219ENST00000588411 OR5D18Q8NGL1 313 aa17.7■□□□□ 0.42
CIRBP-219ENST00000588411 ABCB10Q9NRK6 738 aa17.7■□□□□ 0.42
CIRBP-219ENST00000588411 GSTK1Q9Y2Q3 226 aa17.7■□□□□ 0.42
CIRBP-219ENST00000588411 TRRAPQ9Y4A5 3859 aa17.7■□□□□ 0.42
CIRBP-219ENST00000588411 MEX3AA1L020 520 aaKnown RBP17.69■□□□□ 0.42
CIRBP-219ENST00000588411 FAM90A8PA6NJQ4 464 aa17.69■□□□□ 0.42
CIRBP-219ENST00000588411 SIRPB1O00241 398 aa17.69■□□□□ 0.42
CIRBP-219ENST00000588411 SULT1B1O43704 296 aa17.69■□□□□ 0.42
CIRBP-219ENST00000588411 PSPNO60542 156 aa17.69■□□□□ 0.42
CIRBP-219ENST00000588411 CALCBP10092 127 aa17.69■□□□□ 0.42
CIRBP-219ENST00000588411 ERP29P30040 261 aaKnown RBP17.69■□□□□ 0.42
CIRBP-219ENST00000588411 P2RX3P56373 397 aa17.69■□□□□ 0.42
CIRBP-219ENST00000588411 SLC35E4Q6ICL7 350 aa17.69■□□□□ 0.42
CIRBP-219ENST00000588411 PARP16Q8N5Y8 322 aa17.69■□□□□ 0.42
CIRBP-219ENST00000588411 OR52N4Q8NGI2 321 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms