RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 PRAMEF5Q5TYX0 476 aa10.93□□□□□ -0.66
CLPTM1-208ENST00000588274 ZNF322Q6U7Q0 402 aaPredicted RBP10.93□□□□□ -0.66
CLPTM1-208ENST00000588274 BCAS4Q8TDM0 211 aa10.93□□□□□ -0.66
CLPTM1-208ENST00000588274 RNF166Q96A37 237 aaPredicted RBP10.93□□□□□ -0.66
CLPTM1-208ENST00000588274 ASB9Q96DX5 294 aa10.93□□□□□ -0.66
CLPTM1-208ENST00000588274 P2RX4Q99571 388 aa10.93□□□□□ -0.66
CLPTM1-208ENST00000588274 CHST5Q9GZS9 411 aa10.93□□□□□ -0.66
CLPTM1-208ENST00000588274 ZNF286AQ9HBT8 521 aa10.93□□□□□ -0.66
CLPTM1-208ENST00000588274 MED4Q9NPJ6 270 aa10.93□□□□□ -0.66
CLPTM1-208ENST00000588274 RBFOX1Q9NWB1 397 aaKnown RBP10.93□□□□□ -0.66
CLPTM1-208ENST00000588274 DPM3Q9P2X0 92 aa10.93□□□□□ -0.66
CLPTM1-208ENST00000588274 IKZF2Q9UKS7 526 aa10.93□□□□□ -0.66
CLPTM1-208ENST00000588274 TMEM14AQ9Y6G1 99 aa10.93□□□□□ -0.66
CLPTM1-208ENST00000588274 FAM230AA0A1W2PPH8 454 aa10.92□□□□□ -0.66
CLPTM1-208ENST00000588274 FAM172BPA6NC97 362 aa10.92□□□□□ -0.66
CLPTM1-208ENST00000588274 E9PQ18 207 aa10.92□□□□□ -0.66
CLPTM1-208ENST00000588274 ENTPD6O75354 484 aa10.92□□□□□ -0.66
CLPTM1-208ENST00000588274 CCDC159P0C7I6 412 aa10.92□□□□□ -0.66
CLPTM1-208ENST00000588274 ERP29P30040 261 aaKnown RBP10.92□□□□□ -0.66
CLPTM1-208ENST00000588274 NPBWR2P48146 333 aa10.92□□□□□ -0.66
CLPTM1-208ENST00000588274 P2RX3P56373 397 aa10.92□□□□□ -0.66
CLPTM1-208ENST00000588274 ESRRGP62508 458 aa10.92□□□□□ -0.66
CLPTM1-208ENST00000588274 RPL23AP62750 156 aaKnown RBP10.92□□□□□ -0.66
CLPTM1-208ENST00000588274 IL18R1Q13478 541 aa10.92□□□□□ -0.66
CLPTM1-208ENST00000588274 ZNF146Q15072 292 aa10.92□□□□□ -0.66
CLPTM1-208ENST00000588274 GRK1Q15835 563 aa10.92□□□□□ -0.66
CLPTM1-208ENST00000588274 AADACL4Q5VUY2 407 aa10.92□□□□□ -0.66
CLPTM1-208ENST00000588274 HEPN1Q6WQI6 88 aa10.92□□□□□ -0.66
CLPTM1-208ENST00000588274 ZBTB49Q6ZSB9 765 aa10.92□□□□□ -0.66
CLPTM1-208ENST00000588274 SLC25A26Q70HW3 274 aa10.92□□□□□ -0.66
CLPTM1-208ENST00000588274 OR2W3Q7Z3T1 314 aa10.92□□□□□ -0.66
CLPTM1-208ENST00000588274 PIGWQ7Z7B1 504 aa10.92□□□□□ -0.66
CLPTM1-208ENST00000588274 ARHGAP24Q8N264 748 aa10.92□□□□□ -0.66
CLPTM1-208ENST00000588274 ABHD12Q8N2K0 398 aa10.92□□□□□ -0.66
CLPTM1-208ENST00000588274 CNN2Q99439 309 aaKnown RBP10.92□□□□□ -0.66
CLPTM1-208ENST00000588274 LYSTQ99698 3801 aa10.92□□□□□ -0.66
CLPTM1-208ENST00000588274 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.92□□□□□ -0.66
CLPTM1-208ENST00000588274 UBE2J1Q9Y385 318 aaPredicted RBP10.92□□□□□ -0.66
CLPTM1-208ENST00000588274 STARD9Q9P2P6 4700 aa10.92□□□□□ -0.66
CLPTM1-208ENST00000588274 TENM2Q9NT68 2774 aa10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 A0A087X0M5 115 aa10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 IGKV1-9A0A0C4DH69 117 aa10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 TRBV2A0A0J9YWF9 115 aa10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 A0A1B0GX30 115 aa10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 FAM90A18PA6NE21 464 aa10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 FAM90A16PA6NEW6 464 aa10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 FAM90A20PA6NIJ5 464 aa10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 FAM90A9PA6NNJ1 464 aa10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 FAM90A12PA8MX19 464 aa10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 FAM90A5PA8MXJ8 464 aa10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 MGST3O14880 152 aa10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 FAM90A15PP0C7V4 464 aa10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 FAM90A13PP0C7W8 464 aa10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 FAM90A14PP0C7W9 464 aa10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 FAM90A24PP0C7X0 464 aa10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 DUSP1P28562 367 aa10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 HLA-DRB5Q30154 266 aa10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 KHDC1LQ5JSQ8 128 aa10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 TPTE2P1Q5T6R2 138 aa10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 CATSPERDQ86XM0 798 aa10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 SLC35F2Q8IXU6 374 aa10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 CANT1Q8WVQ1 401 aa10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 AKR1E2Q96JD6 320 aa10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 TVP23BQ9NYZ1 205 aa10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 GTF2A1LQ9UNN4 478 aa10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 LSM4Q9Y4Z0 139 aaKnown RBP10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 SNX5Q9Y5X3 404 aa10.91□□□□□ -0.66
CLPTM1-208ENST00000588274 IGKV1-12A0A0C4DH73 117 aa10.9□□□□□ -0.66
CLPTM1-208ENST00000588274 BUB1B-PAK6H3BSN5 160 aa10.9□□□□□ -0.66
CLPTM1-208ENST00000588274 INMTO95050 263 aa10.9□□□□□ -0.66
CLPTM1-208ENST00000588274 IGKV1D-12P01611 117 aa10.9□□□□□ -0.66
CLPTM1-208ENST00000588274 BCL3P20749 454 aa10.9□□□□□ -0.66
CLPTM1-208ENST00000588274 GABRR1P24046 479 aa10.9□□□□□ -0.66
CLPTM1-208ENST00000588274 CDK2P24941 298 aa10.9□□□□□ -0.66
CLPTM1-208ENST00000588274 PEX2P28328 305 aa10.9□□□□□ -0.66
CLPTM1-208ENST00000588274 SNAPC1Q16533 368 aa10.9□□□□□ -0.66
CLPTM1-208ENST00000588274 FAHD1Q6P587 224 aa10.9□□□□□ -0.66
CLPTM1-208ENST00000588274 C8orf86Q6ZUL3 223 aa10.9□□□□□ -0.66
CLPTM1-208ENST00000588274 RNF144BQ7Z419 303 aa10.9□□□□□ -0.66
CLPTM1-208ENST00000588274 ZNF329Q86UD4 541 aa10.9□□□□□ -0.66
CLPTM1-208ENST00000588274 RTN4RL2Q86UN3 420 aa10.9□□□□□ -0.66
CLPTM1-208ENST00000588274 EGFL6Q8IUX8 553 aa10.9□□□□□ -0.66
CLPTM1-208ENST00000588274 CORO2AQ92828 525 aa10.9□□□□□ -0.66
CLPTM1-208ENST00000588274 EMG1Q92979 244 aaKnown RBP10.9□□□□□ -0.66
CLPTM1-208ENST00000588274 CLN6Q9NWW5 311 aa10.9□□□□□ -0.66
CLPTM1-208ENST00000588274 ARL2BPQ9Y2Y0 163 aa10.9□□□□□ -0.66
CLPTM1-208ENST00000588274 PSMB11A5LHX3 300 aa10.89□□□□□ -0.67
CLPTM1-208ENST00000588274 B2RBV5 119 aa10.89□□□□□ -0.67
CLPTM1-208ENST00000588274 H3BSH0 61 aa10.89□□□□□ -0.67
CLPTM1-208ENST00000588274 CLIC3O95833 236 aa10.89□□□□□ -0.67
CLPTM1-208ENST00000588274 T-ENOLP0DO92 83 aa10.89□□□□□ -0.67
CLPTM1-208ENST00000588274 CALCBP10092 127 aa10.89□□□□□ -0.67
CLPTM1-208ENST00000588274 ANXA8P13928 327 aa10.89□□□□□ -0.67
CLPTM1-208ENST00000588274 EPHA2P29317 976 aa10.89□□□□□ -0.67
CLPTM1-208ENST00000588274 BRS3P32247 399 aa10.89□□□□□ -0.67
CLPTM1-208ENST00000588274 GLIPR1P48060 266 aa10.89□□□□□ -0.67
CLPTM1-208ENST00000588274 FUT6P51993 359 aa10.89□□□□□ -0.67
CLPTM1-208ENST00000588274 CRISP1P54107 249 aa10.89□□□□□ -0.67
CLPTM1-208ENST00000588274 ISL1P61371 349 aa10.89□□□□□ -0.67
CLPTM1-208ENST00000588274 HSP90B2PQ58FF3 399 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms