RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 NDUFA11Q86Y39 141 aa9.35□□□□□ -0.91
LIG3-207ENST00000586119 CALHM1Q8IU99 346 aa9.35□□□□□ -0.91
LIG3-207ENST00000586119 EGFL6Q8IUX8 553 aa9.35□□□□□ -0.91
LIG3-207ENST00000586119 ZNF561Q8N587 486 aa9.35□□□□□ -0.91
LIG3-207ENST00000586119 ADGRL4Q9HBW9 690 aa9.35□□□□□ -0.91
LIG3-207ENST00000586119 PLCXD1Q9NUJ7 323 aa9.35□□□□□ -0.91
LIG3-207ENST00000586119 EXOGQ9Y2C4 368 aaKnown RBP9.35□□□□□ -0.91
LIG3-207ENST00000586119 HILPDAQ9Y5L2 63 aa9.35□□□□□ -0.91
LIG3-207ENST00000586119 A0A1B0GTI1 187 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 PQLC2LA1A4F0 135 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 OR5B21A6NL26 309 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 VGLL3A8MV65 326 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 ODF3BA8MYP8 253 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 ZNF670-ZNF695F2Z2N8 137 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 K7EIL1 84 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 SLC1A7O00341 560 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 DENRO43583 198 aaKnown RBP9.34□□□□□ -0.91
LIG3-207ENST00000586119 SRSF10O75494 262 aaKnown RBP9.34□□□□□ -0.91
LIG3-207ENST00000586119 NXPH2O95156 264 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 FADS2O95864 444 aaKnown RBP9.34□□□□□ -0.91
LIG3-207ENST00000586119 GNAO1P09471 354 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 DBTP11182 482 aaKnown RBP9.34□□□□□ -0.91
LIG3-207ENST00000586119 COL10A1Q03692 680 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 ZNF91Q05481 1191 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 RAB40BQ12829 278 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 C11orf87Q6NUJ2 197 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 DEGS2Q6QHC5 323 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 BAIAP2L2Q6UXY1 529 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 TCF23Q7RTU1 214 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 REC114Q7Z4M0 266 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 SLC35F2Q8IXU6 374 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 TPRX1Q8N7U7 411 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 OR4S1Q8NGB4 309 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 OR14K1Q8NGZ2 314 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 TRMT10AQ8TBZ6 339 aaKnown RBP9.34□□□□□ -0.91
LIG3-207ENST00000586119 RNFT2Q96EX2 444 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 NRIP2Q9BQI9 281 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 OCSTAMPQ9BR26 566 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 HES4Q9HCC6 221 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 INPP5EQ9NRR6 644 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 ENPP5Q9UJA9 477 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 RYR3Q15413 4870 aa9.34□□□□□ -0.91
LIG3-207ENST00000586119 TMEM82A0PJX8 343 aa9.33□□□□□ -0.92
LIG3-207ENST00000586119 J3QT63 122 aa9.33□□□□□ -0.92
LIG3-207ENST00000586119 K7N7A8 449 aa9.33□□□□□ -0.92
LIG3-207ENST00000586119 XPNPEP2O43895 674 aa9.33□□□□□ -0.92
LIG3-207ENST00000586119 NOS1APO75052 506 aaPredicted RBP9.33□□□□□ -0.92
LIG3-207ENST00000586119 ZNF254O75437 659 aa9.33□□□□□ -0.92
LIG3-207ENST00000586119 MMP23AO75900 390 aa9.33□□□□□ -0.92
LIG3-207ENST00000586119 CD24P25063 80 aa9.33□□□□□ -0.92
LIG3-207ENST00000586119 ERVK11-1P61568 191 aa9.33□□□□□ -0.92
LIG3-207ENST00000586119 ROM1Q03395 351 aa9.33□□□□□ -0.92
LIG3-207ENST00000586119 DYNC1I2Q13409 638 aaKnown RBP9.33□□□□□ -0.92
LIG3-207ENST00000586119 SMIM21Q3B7S5 101 aa9.33□□□□□ -0.92
LIG3-207ENST00000586119 TCTEX1D4Q5JR98 221 aa9.33□□□□□ -0.92
LIG3-207ENST00000586119 ZNF684Q5T5D7 378 aa9.33□□□□□ -0.92
LIG3-207ENST00000586119 ZNF626Q68DY1 528 aa9.33□□□□□ -0.92
LIG3-207ENST00000586119 TMEM42Q69YG0 159 aa9.33□□□□□ -0.92
LIG3-207ENST00000586119 C10orf99Q6UWK7 81 aa9.33□□□□□ -0.92
LIG3-207ENST00000586119 LIAT1Q6ZQX7 453 aa9.33□□□□□ -0.92
LIG3-207ENST00000586119 CNIH3Q8TBE1 160 aa9.33□□□□□ -0.92
LIG3-207ENST00000586119 MALSU1Q96EH3 234 aa9.33□□□□□ -0.92
LIG3-207ENST00000586119 MRPL48Q96GC5 212 aaKnown RBP9.33□□□□□ -0.92
LIG3-207ENST00000586119 JAM3Q9BX67 310 aa9.33□□□□□ -0.92
LIG3-207ENST00000586119 MROQ9BYG7 248 aa9.33□□□□□ -0.92
LIG3-207ENST00000586119 PRSS22Q9GZN4 317 aa9.33□□□□□ -0.92
LIG3-207ENST00000586119 CNOT2Q9NZN8 540 aaKnown RBP9.33□□□□□ -0.92
LIG3-207ENST00000586119 AASSQ9UDR5 926 aa9.33□□□□□ -0.92
LIG3-207ENST00000586119 NUFIP1Q9UHK0 495 aaKnown RBP9.33□□□□□ -0.92
LIG3-207ENST00000586119 GTF2A1LQ9UNN4 478 aa9.33□□□□□ -0.92
LIG3-207ENST00000586119 SLC22A13Q9Y226 551 aa9.33□□□□□ -0.92
LIG3-207ENST00000586119 IGKV1-27A0A075B6S5 117 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 A0A1W2PPH5 198 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 FAM230AA0A1W2PPH8 454 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 WI2-2373I1.2A0A1W2PRP0 233 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 EFCAB10A6NFE3 127 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 ACOD1A6NK06 481 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 SH2D7A6NKC9 451 aaPredicted RBP9.32□□□□□ -0.92
LIG3-207ENST00000586119 J3QRE1 110 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 ZNF737O75373 536 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 DHRS3O75911 302 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 CCDC159P0C7I6 412 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 ZNF728P0DKX0 622 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 IGHV1-8P0DP01 117 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 VSIG8P0DPA2 414 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 CALCBP10092 127 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 ATP6V1B1P15313 513 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 DCKP27707 260 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 EDDM3BP56851 147 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 KRTAP10-11P60412 298 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 CD83Q01151 205 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 MED21Q13503 144 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 ODF4Q2M2E3 257 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 CLVS2Q5SYC1 327 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 C6orf141Q5SZD1 244 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 KCTD20Q7Z5Y7 419 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 ZNF573Q86YE8 665 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 ZNF679Q8IYX0 411 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 ACBD7Q8N6N7 88 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 ASCC1Q8N9N2 400 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms