RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 C2orf68Q2NKX9 166 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 C17orf107Q6ZR85 190 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 CALHM1Q8IU99 346 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 C1orf174Q8IYL3 243 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 CNEP1R1Q8N9A8 125 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 C9orf106Q8NAJ2 232 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 OR10AD1Q8NGE0 317 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 OR13G1Q8NGZ3 307 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 COQ8AQ8NI60 647 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 HPSE2Q8WWQ2 592 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 OR5P3Q8WZ94 311 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 MICU1Q9BPX6 476 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 FAAP24Q9BTP7 215 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 SPACA1Q9HBV2 294 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 PLSCR4Q9NRQ2 329 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 PROCRQ9UNN8 238 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 HECTD1Q9ULT8 2610 aa9.68□□□□□ -0.86
LIG3-204ENST00000585740 GTF3C1Q12789 2109 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 MBD3L4A6NDZ8 208 aaPredicted RBP9.67□□□□□ -0.86
LIG3-204ENST00000585740 MBD3L3A6NE82 208 aaPredicted RBP9.67□□□□□ -0.86
LIG3-204ENST00000585740 MBD3L5A6NJ08 208 aaPredicted RBP9.67□□□□□ -0.86
LIG3-204ENST00000585740 MCRIP1C9JLW8 97 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 WDR1O75083 606 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 GLAP06280 429 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 SFTPBP07988 381 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 FCGR3AP08637 254 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 HOXD4P09016 255 aaPredicted RBP9.67□□□□□ -0.86
LIG3-204ENST00000585740 PGAM2P15259 253 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 AKR1C4P17516 323 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 VAMP1P23763 118 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 HAAOP46952 286 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 NPY4RP50391 375 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 GPM6AP51674 278 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 PRSS12P56730 875 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 CYCSP99999 105 aaKnown RBP9.67□□□□□ -0.86
LIG3-204ENST00000585740 IKZF1Q13422 519 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 IL13RA2Q14627 380 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 OPCMLQ14982 345 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 P2RY6Q15077 328 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 PIGYQ3MUY2 71 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 PLEKHN1Q494U1 663 aaPredicted RBP9.67□□□□□ -0.86
LIG3-204ENST00000585740 LY6G6FQ5SQ64 297 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 DCAF12L2Q5VW00 463 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 TMEM65Q6PI78 240 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 TEX261Q6UWH6 196 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 C3P1Q6ZMU1 363 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 Q6ZS49 121 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 RFPL4BQ6ZWI9 263 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 SLC7A5P1Q8MH63 180 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 GCNT2Q8N0V5 402 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 OR5M9Q8NGP3 310 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 MBD3L2Q8NHZ7 208 aaPredicted RBP9.67□□□□□ -0.86
LIG3-204ENST00000585740 ELMOD3Q96FG2 381 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 SULT4A1Q9BR01 284 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 PDCD10Q9BUL8 212 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 RTL8AQ9BWD3 113 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 ZNF442Q9H7R0 627 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 C12orf4Q9NQ89 552 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 SLC23A1Q9UHI7 598 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 ZNF230Q9UIE0 474 aaPredicted RBP9.67□□□□□ -0.86
LIG3-204ENST00000585740 U3KQ87 197 aa9.67□□□□□ -0.86
LIG3-204ENST00000585740 TUBAL3A6NHL2 446 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 MKRN2OSH3BPM6 223 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 J3QT63 122 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 SMPD2O60906 423 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 LYZL6O75951 148 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 OR7C1O76099 320 aaPredicted RBP9.66□□□□□ -0.86
LIG3-204ENST00000585740 CTSDP07339 412 aaPredicted RBP9.66□□□□□ -0.86
LIG3-204ENST00000585740 SLC25A4P12235 298 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 RAC2P15153 192 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 RPA2P15927 270 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 BCL3P20749 454 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 GLP1RP43220 463 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 IDH3GP51553 393 aaPredicted RBP9.66□□□□□ -0.86
LIG3-204ENST00000585740 PPP1CBP62140 327 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 IL24Q13007 206 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 KRTCAP3Q53RY4 240 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 C1QTNF12Q5T7M4 302 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 AADACL3Q5VUY0 350 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 ZNF585AQ6P3V2 769 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 GSG1LQ6UXU4 331 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 BEND4Q6ZU67 534 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 LURAP1LQ8IV03 231 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 Q8IYB0 196 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 ADAD2Q8NCV1 583 aaKnown RBP9.66□□□□□ -0.86
LIG3-204ENST00000585740 ZNF680Q8NEM1 530 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 GTF3AQ92664 365 aaKnown RBP9.66□□□□□ -0.86
LIG3-204ENST00000585740 SLAMF9Q96A28 289 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 TAAR6Q96RI8 345 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 RIMS4Q9H426 269 aaPredicted RBP9.66□□□□□ -0.86
LIG3-204ENST00000585740 C5orf66Q9H5L9 145 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 HEXA-AS1Q9H8Q6 139 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 FN3KRPQ9HA64 309 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 RAB18Q9NP72 206 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 DECR2Q9NUI1 292 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 AMDHD2Q9Y303 409 aa9.66□□□□□ -0.86
LIG3-204ENST00000585740 MYO18BQ8IUG5 2567 aa9.65□□□□□ -0.86
LIG3-204ENST00000585740 FXYD6-FXYD2A0A087WZ82 144 aa9.65□□□□□ -0.86
LIG3-204ENST00000585740 A0A0D9SG52 128 aa9.65□□□□□ -0.86
LIG3-204ENST00000585740 OR5H14A6NHG9 310 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms