RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 C3orf80F5H4A9 247 aa9.77□□□□□ -0.85
CDRT1-207ENST00000583965 F8VVB4 439 aa9.77□□□□□ -0.85
CDRT1-207ENST00000583965 F8VWA3 439 aa9.77□□□□□ -0.85
CDRT1-207ENST00000583965 WNT9BO14905 357 aa9.77□□□□□ -0.85
CDRT1-207ENST00000583965 LDLRAD4O15165 306 aa9.77□□□□□ -0.85
CDRT1-207ENST00000583965 CRTAPO75718 401 aaPredicted RBP9.77□□□□□ -0.85
CDRT1-207ENST00000583965 SLC25A16P16260 332 aa9.77□□□□□ -0.85
CDRT1-207ENST00000583965 MGMTP16455 207 aa9.77□□□□□ -0.85
CDRT1-207ENST00000583965 PRKACAP17612 351 aa9.77□□□□□ -0.85
CDRT1-207ENST00000583965 RAB6AP20340 208 aa9.77□□□□□ -0.85
CDRT1-207ENST00000583965 CPT2P23786 658 aa9.77□□□□□ -0.85
CDRT1-207ENST00000583965 CD80P33681 288 aa9.77□□□□□ -0.85
CDRT1-207ENST00000583965 CLDN12P56749 244 aa9.77□□□□□ -0.85
CDRT1-207ENST00000583965 RBM11P57052 281 aaKnown RBP9.77□□□□□ -0.85
CDRT1-207ENST00000583965 QRFPP83859 136 aa9.77□□□□□ -0.85
CDRT1-207ENST00000583965 IL13RA2Q14627 380 aa9.77□□□□□ -0.85
CDRT1-207ENST00000583965 CLEC12BQ2HXU8 276 aa9.77□□□□□ -0.85
CDRT1-207ENST00000583965 C2orf76Q3KRA6 126 aa9.77□□□□□ -0.85
CDRT1-207ENST00000583965 TMEM155Q4W5P6 130 aa9.77□□□□□ -0.85
CDRT1-207ENST00000583965 SPANXN2Q5MJ10 180 aa9.77□□□□□ -0.85
CDRT1-207ENST00000583965 LRRC28Q86X40 367 aaPredicted RBP9.77□□□□□ -0.85
CDRT1-207ENST00000583965 LAX1Q8IWV1 398 aa9.77□□□□□ -0.85
CDRT1-207ENST00000583965 OR10K1Q8NGX5 313 aa9.77□□□□□ -0.85
CDRT1-207ENST00000583965 SOSTQ9BQB4 213 aa9.77□□□□□ -0.85
CDRT1-207ENST00000583965 TMEM59Q9BXS4 323 aa9.77□□□□□ -0.85
CDRT1-207ENST00000583965 OR5V1Q9UGF6 321 aa9.77□□□□□ -0.85
CDRT1-207ENST00000583965 RAB22AQ9UL26 194 aa9.77□□□□□ -0.85
CDRT1-207ENST00000583965 SPATA2Q9UM82 520 aa9.77□□□□□ -0.85
CDRT1-207ENST00000583965 KIAA2026Q5HYC2 2103 aa9.77□□□□□ -0.85
CDRT1-207ENST00000583965 ITPR3Q14573 2671 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 TMEM272A0A1B0GTI8 110 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 FAM90A10PA6NDY2 464 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 FAM90A18PA6NE21 464 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 FAM90A16PA6NEW6 464 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 FAM90A20PA6NIJ5 464 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 FAM90A8PA6NJQ4 464 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 FAM90A7PA6NKC0 464 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 OR2AT4A6NND4 320 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 FAM90A22PA8MWA6 464 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 FAM90A12PA8MX19 464 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 FAM90A5PA8MXJ8 464 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 FAM90A23PA8MXZ1 464 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 VWC2LB2RUY7 222 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 H3BUI4 141 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 SH2D1BO14796 132 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 RGS5O15539 181 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 MPIG6BO95866 241 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 FAM90A15PP0C7V4 464 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 FAM90A13PP0C7W8 464 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 FAM90A14PP0C7W9 464 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 FAM90A24PP0C7X0 464 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 PSG2P11465 335 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 NR4A2P43354 598 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 GMFBP60983 142 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 UNC119Q13432 240 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 ZMYND11Q15326 602 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 MPV17LQ2QL34 196 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 Q5PR19 223 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 FAM201AQ5SY85 155 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 ATPAF1Q5TC12 328 aaPredicted RBP9.76□□□□□ -0.85
CDRT1-207ENST00000583965 STUMQ69YW2 141 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 SFRP4Q6FHJ7 346 aaPredicted RBP9.76□□□□□ -0.85
CDRT1-207ENST00000583965 DCDC5Q6ZRR9 648 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 BATF2Q8N1L9 274 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 SPICQ8N5J4 248 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 TMEM104Q8NE00 496 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 ANGPTL6Q8NI99 470 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 Q96M66 194 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 URM1Q9BTM9 101 aaKnown RBP9.76□□□□□ -0.85
CDRT1-207ENST00000583965 BPESC1Q9GZL8 116 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 TMEM165Q9HC07 324 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 ST3GAL6Q9Y274 331 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 V9GYH0 126 aa9.76□□□□□ -0.85
CDRT1-207ENST00000583965 MALRD1Q5VYJ5 2156 aa9.75□□□□□ -0.85
CDRT1-207ENST00000583965 WNK2Q9Y3S1 2297 aa9.75□□□□□ -0.85
CDRT1-207ENST00000583965 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.75□□□□□ -0.85
CDRT1-207ENST00000583965 IGHV3OR15-7A0A075B7D8 119 aa9.75□□□□□ -0.85
CDRT1-207ENST00000583965 A0A0B4J203 849 aa9.75□□□□□ -0.85
CDRT1-207ENST00000583965 A0A1W2PP11 408 aa9.75□□□□□ -0.85
CDRT1-207ENST00000583965 ISPDA4D126 451 aa9.75□□□□□ -0.85
CDRT1-207ENST00000583965 NKX6-3A6NJ46 265 aa9.75□□□□□ -0.85
CDRT1-207ENST00000583965 RFPL4AA6NLU0 287 aa9.75□□□□□ -0.85
CDRT1-207ENST00000583965 RFPL4AL1F8VTS6 287 aa9.75□□□□□ -0.85
CDRT1-207ENST00000583965 ZNF205O95201 554 aa9.75□□□□□ -0.85
CDRT1-207ENST00000583965 PAHP00439 452 aa9.75□□□□□ -0.85
CDRT1-207ENST00000583965 APOA1P02647 267 aa9.75□□□□□ -0.85
CDRT1-207ENST00000583965 SNRPBP14678 240 aaKnown RBP9.75□□□□□ -0.85
CDRT1-207ENST00000583965 RBMXP38159 391 aaKnown RBP9.75□□□□□ -0.85
CDRT1-207ENST00000583965 RPS27AP62979 156 aaKnown RBP9.75□□□□□ -0.85
CDRT1-207ENST00000583965 HOXA4Q00056 320 aaPredicted RBP9.75□□□□□ -0.85
CDRT1-207ENST00000583965 AVPI1Q5T686 147 aa9.75□□□□□ -0.85
CDRT1-207ENST00000583965 CHST4Q8NCG5 386 aa9.75□□□□□ -0.85
CDRT1-207ENST00000583965 C19orf18Q8NEA5 215 aa9.75□□□□□ -0.85
CDRT1-207ENST00000583965 DEFB108BQ8NET1 73 aa9.75□□□□□ -0.85
CDRT1-207ENST00000583965 LGALS14Q8TCE9 139 aa9.75□□□□□ -0.85
CDRT1-207ENST00000583965 FAM46BQ96A09 425 aa9.75□□□□□ -0.85
CDRT1-207ENST00000583965 SEH1LQ96EE3 360 aa9.75□□□□□ -0.85
CDRT1-207ENST00000583965 TMEM246Q9BRR3 403 aa9.75□□□□□ -0.85
CDRT1-207ENST00000583965 CCDC32Q9BV29 185 aa9.75□□□□□ -0.85
CDRT1-207ENST00000583965 TM2D1Q9BX74 207 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms