RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 UNC119Q13432 240 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 RSU1Q15404 277 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 CLEC12BQ2HXU8 276 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 FAM166AQ6J272 317 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 NRARPQ7Z6K4 114 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 PEG10Q86TG7 708 aaKnown RBP9.21□□□□□ -0.93
TOP3A-216ENST00000583804 CMTM4Q8IZR5 234 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 C1orf87Q8N0U7 546 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 C19orf18Q8NEA5 215 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 DEFB108BQ8NET1 73 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 OR51F2Q8NH61 342 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 Q8TCH9 128 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 FAM168AQ92567 244 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 GCDHQ92947 438 aaPredicted RBP9.21□□□□□ -0.93
TOP3A-216ENST00000583804 UQCC2Q9BRT2 126 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 MYOZ1Q9NP98 299 aaPredicted RBP9.21□□□□□ -0.93
TOP3A-216ENST00000583804 RBFOX1Q9NWB1 397 aaKnown RBP9.21□□□□□ -0.93
TOP3A-216ENST00000583804 ZNF581Q9P0T4 197 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 ABRACLQ9P1F3 81 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 IL36RNQ9UBH0 155 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 ITPR2Q14571 2701 aa9.21□□□□□ -0.93
TOP3A-216ENST00000583804 TRAPPC2LH3BP13 241 aa9.21□□□□□ -0.94
TOP3A-216ENST00000583804 WNT9BO14905 357 aa9.21□□□□□ -0.94
TOP3A-216ENST00000583804 ATP6V1G1O75348 118 aa9.21□□□□□ -0.94
TOP3A-216ENST00000583804 BPNT1O95861 308 aa9.21□□□□□ -0.94
TOP3A-216ENST00000583804 SFTPBP07988 381 aa9.21□□□□□ -0.94
TOP3A-216ENST00000583804 PTHLHP12272 177 aa9.21□□□□□ -0.94
TOP3A-216ENST00000583804 MPZP25189 248 aa9.21□□□□□ -0.94
TOP3A-216ENST00000583804 DUSP1P28562 367 aa9.21□□□□□ -0.94
TOP3A-216ENST00000583804 GPR6P46095 362 aaPredicted RBP9.21□□□□□ -0.94
TOP3A-216ENST00000583804 IL24Q13007 206 aa9.21□□□□□ -0.94
TOP3A-216ENST00000583804 PIGYQ3MUY2 71 aa9.21□□□□□ -0.94
TOP3A-216ENST00000583804 UBE2NLQ5JXB2 153 aa9.21□□□□□ -0.94
TOP3A-216ENST00000583804 Q5PR19 223 aa9.21□□□□□ -0.94
TOP3A-216ENST00000583804 FAM201AQ5SY85 155 aa9.21□□□□□ -0.94
TOP3A-216ENST00000583804 AVPI1Q5T686 147 aa9.21□□□□□ -0.94
TOP3A-216ENST00000583804 SFRP4Q6FHJ7 346 aaPredicted RBP9.21□□□□□ -0.94
TOP3A-216ENST00000583804 CDH26Q8IXH8 852 aa9.21□□□□□ -0.94
TOP3A-216ENST00000583804 MKXQ8IYA7 352 aa9.21□□□□□ -0.94
TOP3A-216ENST00000583804 GCSAMQ8N6F7 178 aa9.21□□□□□ -0.94
TOP3A-216ENST00000583804 RAB1CQ92928 201 aa9.21□□□□□ -0.94
TOP3A-216ENST00000583804 SEH1LQ96EE3 360 aa9.21□□□□□ -0.94
TOP3A-216ENST00000583804 TIMD4Q96H15 378 aa9.21□□□□□ -0.94
TOP3A-216ENST00000583804 NICN1Q9BSH3 213 aa9.21□□□□□ -0.94
TOP3A-216ENST00000583804 SELENOIQ9C0D9 397 aa9.21□□□□□ -0.94
TOP3A-216ENST00000583804 METTL9Q9H1A3 318 aa9.21□□□□□ -0.94
TOP3A-216ENST00000583804 SPATA2Q9UM82 520 aa9.21□□□□□ -0.94
TOP3A-216ENST00000583804 MRPS7Q9Y2R9 242 aaKnown RBP9.21□□□□□ -0.94
TOP3A-216ENST00000583804 ARID1AO14497 2285 aa9.2□□□□□ -0.94
TOP3A-216ENST00000583804 PPIAL4EA0A075B759 164 aa9.2□□□□□ -0.94
TOP3A-216ENST00000583804 IGHV3OR15-7A0A075B7D8 119 aa9.2□□□□□ -0.94
TOP3A-216ENST00000583804 A0A0A6YYD4 124 aa9.2□□□□□ -0.94
TOP3A-216ENST00000583804 PPIAL4DF5H284 164 aa9.2□□□□□ -0.94
TOP3A-216ENST00000583804 LHBP01229 141 aa9.2□□□□□ -0.94
TOP3A-216ENST00000583804 CSTBP04080 98 aaKnown RBP9.2□□□□□ -0.94
TOP3A-216ENST00000583804 FCER2P06734 321 aa9.2□□□□□ -0.94
TOP3A-216ENST00000583804 PPIAL4FP0DN26 164 aa9.2□□□□□ -0.94
TOP3A-216ENST00000583804 MGMTP16455 207 aa9.2□□□□□ -0.94
TOP3A-216ENST00000583804 EGR1P18146 543 aa9.2□□□□□ -0.94
TOP3A-216ENST00000583804 GLRA1P23415 457 aa9.2□□□□□ -0.94
TOP3A-216ENST00000583804 GABRR1P24046 479 aa9.2□□□□□ -0.94
TOP3A-216ENST00000583804 CD80P33681 288 aa9.2□□□□□ -0.94
TOP3A-216ENST00000583804 DSCR9P59020 149 aa9.2□□□□□ -0.94
TOP3A-216ENST00000583804 IL18Q14116 193 aa9.2□□□□□ -0.94
TOP3A-216ENST00000583804 MOGAT2Q3SYC2 334 aa9.2□□□□□ -0.94
TOP3A-216ENST00000583804 ZSCAN4Q8NAM6 433 aaPredicted RBP9.2□□□□□ -0.94
TOP3A-216ENST00000583804 POC1AQ8NBT0 407 aa9.2□□□□□ -0.94
TOP3A-216ENST00000583804 OR10Z1Q8NGY1 313 aa9.2□□□□□ -0.94
TOP3A-216ENST00000583804 EMG1Q92979 244 aaKnown RBP9.2□□□□□ -0.94
TOP3A-216ENST00000583804 C1orf147Q96MC9 270 aaPredicted RBP9.2□□□□□ -0.94
TOP3A-216ENST00000583804 FOXC2Q99958 501 aa9.2□□□□□ -0.94
TOP3A-216ENST00000583804 PIMREGQ9BSJ6 248 aa9.2□□□□□ -0.94
TOP3A-216ENST00000583804 TMEM59Q9BXS4 323 aa9.2□□□□□ -0.94
TOP3A-216ENST00000583804 WDR13Q9H1Z4 485 aa9.2□□□□□ -0.94
TOP3A-216ENST00000583804 ZMAT3Q9HA38 289 aaKnown RBP9.2□□□□□ -0.94
TOP3A-216ENST00000583804 MTCH1Q9NZJ7 389 aa9.2□□□□□ -0.94
TOP3A-216ENST00000583804 DNAJB11Q9UBS4 358 aa9.2□□□□□ -0.94
TOP3A-216ENST00000583804 PPIAL4AQ9Y536 164 aa9.2□□□□□ -0.94
TOP3A-216ENST00000583804 NPTNQ9Y639 398 aa9.2□□□□□ -0.94
TOP3A-216ENST00000583804 DYSFO75923 2080 aa9.19□□□□□ -0.94
TOP3A-216ENST00000583804 CHD3Q12873 2000 aaKnown RBP9.19□□□□□ -0.94
TOP3A-216ENST00000583804 CSMD2Q7Z408 3487 aa9.19□□□□□ -0.94
TOP3A-216ENST00000583804 NOTCH2Q04721 2471 aa9.19□□□□□ -0.94
TOP3A-216ENST00000583804 SRRM5B3KS81 715 aa9.19□□□□□ -0.94
TOP3A-216ENST00000583804 HSPB6O14558 160 aa9.19□□□□□ -0.94
TOP3A-216ENST00000583804 NXPH2O95156 264 aa9.19□□□□□ -0.94
TOP3A-216ENST00000583804 PGA5P0DJD9 388 aa9.19□□□□□ -0.94
TOP3A-216ENST00000583804 PRKACAP17612 351 aa9.19□□□□□ -0.94
TOP3A-216ENST00000583804 CDK2P24941 298 aa9.19□□□□□ -0.94
TOP3A-216ENST00000583804 CFHR2P36980 270 aa9.19□□□□□ -0.94
TOP3A-216ENST00000583804 CEBPDP49716 269 aaPredicted RBP9.19□□□□□ -0.94
TOP3A-216ENST00000583804 VEGFCP49767 419 aa9.19□□□□□ -0.94
TOP3A-216ENST00000583804 BTG1P62324 171 aa9.19□□□□□ -0.94
TOP3A-216ENST00000583804 QRFPP83859 136 aa9.19□□□□□ -0.94
TOP3A-216ENST00000583804 PYDC2Q56P42 97 aa9.19□□□□□ -0.94
TOP3A-216ENST00000583804 NKAPLQ5M9Q1 402 aa9.19□□□□□ -0.94
TOP3A-216ENST00000583804 SHEQ5VZ18 495 aa9.19□□□□□ -0.94
TOP3A-216ENST00000583804 SAXO1Q8IYX7 474 aa9.19□□□□□ -0.94
TOP3A-216ENST00000583804 CHST4Q8NCG5 386 aa9.19□□□□□ -0.94
TOP3A-216ENST00000583804 OR51T1Q8NGJ9 327 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms