RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 LINC00471Q8N535 108 aa8.68□□□□□ -1.02
CASC3-208ENST00000583649 OR8B12Q8NGG6 310 aa8.68□□□□□ -1.02
CASC3-208ENST00000583649 THEM6Q8WUY1 208 aa8.68□□□□□ -1.02
CASC3-208ENST00000583649 LINC00476Q8WZB0 136 aa8.68□□□□□ -1.02
CASC3-208ENST00000583649 UBE2E2Q96LR5 201 aa8.68□□□□□ -1.02
CASC3-208ENST00000583649 PKIBQ9C010 78 aa8.68□□□□□ -1.02
CASC3-208ENST00000583649 OR51J1Q9H342 316 aa8.68□□□□□ -1.02
CASC3-208ENST00000583649 TUBA4BQ9H853 241 aa8.68□□□□□ -1.02
CASC3-208ENST00000583649 LIN7CQ9NUP9 197 aaKnown RBP8.68□□□□□ -1.02
CASC3-208ENST00000583649 SAMD4AQ9UPU9 718 aaKnown RBP8.68□□□□□ -1.02
CASC3-208ENST00000583649 VSIG4Q9Y279 399 aa8.68□□□□□ -1.02
CASC3-208ENST00000583649 CDH10Q9Y6N8 788 aa8.68□□□□□ -1.02
CASC3-208ENST00000583649 STARD9Q9P2P6 4700 aa8.68□□□□□ -1.02
CASC3-208ENST00000583649 PCLOQ9Y6V0 5065 aa8.68□□□□□ -1.02
CASC3-208ENST00000583649 FAM90A18PA6NE21 464 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 FAM90A16PA6NEW6 464 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 FAM90A20PA6NIJ5 464 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 FAM90A9PA6NNJ1 464 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 RIIAD1A6NNX1 92 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 FAM90A12PA8MX19 464 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 FAM90A5PA8MXJ8 464 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 PRR23D1E9PI22 279 aaPredicted RBP8.67□□□□□ -1.02
CASC3-208ENST00000583649 FXYD1O00168 92 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 DLGAP1O14490 977 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 IGHG4P01861 327 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 GYPBP06028 91 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 FAM90A15PP0C7V4 464 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 FAM90A13PP0C7W8 464 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 FAM90A14PP0C7W9 464 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 FAM90A24PP0C7X0 464 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 PRR23D2P0DMB1 279 aaPredicted RBP8.67□□□□□ -1.02
CASC3-208ENST00000583649 PSKH1P11801 424 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 PTGFRP43088 359 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 P2RX3P56373 397 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 MADCAM1Q13477 382 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 HNF4GQ14541 408 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 PRAMEF5Q5TYX0 476 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 TCF23Q7RTU1 214 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 TGIF2LXQ8IUE1 241 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 Q8IYB0 196 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 OR9G1Q8NH87 305 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 GATAD1Q8WUU5 269 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 MCUR1Q96AQ8 359 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 CEP19Q96LK0 163 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 RASL11BQ9BPW5 248 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 CHCHD6Q9BRQ6 235 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 ABCG5Q9H222 651 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 IL1RAPQ9NPH3 570 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 SLC7A11Q9UPY5 501 aa8.67□□□□□ -1.02
CASC3-208ENST00000583649 LY6LH3BQJ8 138 aa8.66□□□□□ -1.02
CASC3-208ENST00000583649 HSPA12AO43301 675 aa8.66□□□□□ -1.02
CASC3-208ENST00000583649 DHRS3O75911 302 aa8.66□□□□□ -1.02
CASC3-208ENST00000583649 HAND1O96004 215 aa8.66□□□□□ -1.02
CASC3-208ENST00000583649 CYB5AP00167 134 aa8.66□□□□□ -1.02
CASC3-208ENST00000583649 IGKV1D-33P01593 117 aa8.66□□□□□ -1.02
CASC3-208ENST00000583649 IGKV1-33P01594 117 aa8.66□□□□□ -1.02
CASC3-208ENST00000583649 MPZP25189 248 aa8.66□□□□□ -1.02
CASC3-208ENST00000583649 GSSP48637 474 aa8.66□□□□□ -1.02
CASC3-208ENST00000583649 CDC42P60953 191 aa8.66□□□□□ -1.02
CASC3-208ENST00000583649 RUNX1Q01196 453 aa8.66□□□□□ -1.02
CASC3-208ENST00000583649 LIPEQ05469 1076 aa8.66□□□□□ -1.02
CASC3-208ENST00000583649 CRMP1Q14194 572 aa8.66□□□□□ -1.02
CASC3-208ENST00000583649 ACSM6Q6P461 480 aa8.66□□□□□ -1.02
CASC3-208ENST00000583649 BATF2Q8N1L9 274 aa8.66□□□□□ -1.02
CASC3-208ENST00000583649 TPRX1Q8N7U7 411 aa8.66□□□□□ -1.02
CASC3-208ENST00000583649 HAVCR2Q8TDQ0 301 aa8.66□□□□□ -1.02
CASC3-208ENST00000583649 ZNRF4Q8WWF5 429 aa8.66□□□□□ -1.02
CASC3-208ENST00000583649 RNF166Q96A37 237 aaPredicted RBP8.66□□□□□ -1.02
CASC3-208ENST00000583649 OTULINQ96BN8 352 aa8.66□□□□□ -1.02
CASC3-208ENST00000583649 DHRS1Q96LJ7 313 aa8.66□□□□□ -1.02
CASC3-208ENST00000583649 ELOVL1Q9BW60 279 aa8.66□□□□□ -1.02
CASC3-208ENST00000583649 CHST6Q9GZX3 395 aa8.66□□□□□ -1.02
CASC3-208ENST00000583649 SEBOXQ9HB31 216 aaPredicted RBP8.66□□□□□ -1.02
CASC3-208ENST00000583649 C19orf73Q9NVV2 129 aa8.66□□□□□ -1.02
CASC3-208ENST00000583649 ACTR3BQ9P1U1 418 aa8.66□□□□□ -1.02
CASC3-208ENST00000583649 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.66□□□□□ -1.02
CASC3-208ENST00000583649 SORL1Q92673 2214 aa8.66□□□□□ -1.02
CASC3-208ENST00000583649 A0A0G2JND7 137 aa8.65□□□□□ -1.02
CASC3-208ENST00000583649 TMEM269A0A1B0GVZ9 245 aa8.65□□□□□ -1.02
CASC3-208ENST00000583649 PQLC2LA1A4F0 135 aa8.65□□□□□ -1.02
CASC3-208ENST00000583649 FAM183AA6NL82 134 aa8.65□□□□□ -1.02
CASC3-208ENST00000583649 ARSBP15848 533 aa8.65□□□□□ -1.02
CASC3-208ENST00000583649 PSMB8P28062 276 aa8.65□□□□□ -1.02
CASC3-208ENST00000583649 ZP1P60852 638 aa8.65□□□□□ -1.02
CASC3-208ENST00000583649 ERVK11-1P61568 191 aa8.65□□□□□ -1.02
CASC3-208ENST00000583649 PITPNAQ00169 270 aa8.65□□□□□ -1.02
CASC3-208ENST00000583649 BNIP1Q12981 228 aa8.65□□□□□ -1.02
CASC3-208ENST00000583649 GTSCR1Q86UQ5 136 aa8.65□□□□□ -1.02
CASC3-208ENST00000583649 ANKRD13BQ86YJ7 626 aa8.65□□□□□ -1.02
CASC3-208ENST00000583649 OR2T33Q8NG76 320 aa8.65□□□□□ -1.02
CASC3-208ENST00000583649 OTOSQ8NHW6 89 aa8.65□□□□□ -1.02
CASC3-208ENST00000583649 DCUN1D4Q92564 292 aa8.65□□□□□ -1.02
CASC3-208ENST00000583649 EMG1Q92979 244 aaKnown RBP8.65□□□□□ -1.02
CASC3-208ENST00000583649 ZBTB9Q96C00 473 aa8.65□□□□□ -1.02
CASC3-208ENST00000583649 MROQ9BYG7 248 aa8.65□□□□□ -1.02
CASC3-208ENST00000583649 EGLN3Q9H6Z9 239 aa8.65□□□□□ -1.02
CASC3-208ENST00000583649 ZNF286AQ9HBT8 521 aa8.65□□□□□ -1.02
CASC3-208ENST00000583649 IL20Q9NYY1 176 aa8.65□□□□□ -1.02
CASC3-208ENST00000583649 COPS3Q9UNS2 423 aa8.65□□□□□ -1.02
CASC3-208ENST00000583649 MRPS28Q9Y2Q9 187 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms